RNA–Protein interactions for RNA: ENST00000296824.3

CCDC127-201, Transcript of coiled-coil domain containing 127, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC127, Length 9,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC127-201ENST00000296824 LCE4AQ5TA78 99 aa4.4□□□□□ -1.71
CCDC127-201ENST00000296824 KRTAP17-1Q9BYP8 105 aa4.39□□□□□ -1.71
CCDC127-201ENST00000296824 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
CCDC127-201ENST00000296824 RYR2Q92736 4967 aa4.35□□□□□ -1.71
CCDC127-201ENST00000296824 KRTAP4-7Q9BYR0 210 aa4.34□□□□□ -1.71
CCDC127-201ENST00000296824 HYDINQ4G0P3 5121 aa4.34□□□□□ -1.71
CCDC127-201ENST00000296824 LOC100996750A0A140TA64 210 aa4.26□□□□□ -1.73
CCDC127-201ENST00000296824 HERC2O95714 4834 aa4.24□□□□□ -1.73
CCDC127-201ENST00000296824 LRP2P98164 4655 aa4.23□□□□□ -1.73
CCDC127-201ENST00000296824 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
CCDC127-201ENST00000296824 KRTAP9-7A8MTY7 169 aa4.18□□□□□ -1.74
CCDC127-201ENST00000296824 KRTAP6-2Q3LI66 62 aa4.18□□□□□ -1.74
CCDC127-201ENST00000296824 KRTAP6-3Q3LI67 103 aa4.14□□□□□ -1.75
CCDC127-201ENST00000296824 HERC1Q15751 4861 aa4.14□□□□□ -1.75
CCDC127-201ENST00000296824 KMT2CQ8NEZ4 4911 aaKnown RBP4.12□□□□□ -1.75
CCDC127-201ENST00000296824 LPAP08519 4548 aa4.12□□□□□ -1.75
CCDC127-201ENST00000296824 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
CCDC127-201ENST00000296824 BIRC6Q9NR09 4857 aa4.08□□□□□ -1.76
CCDC127-201ENST00000296824 KRTAP9-4Q9BYQ2 154 aa4.07□□□□□ -1.76
CCDC127-201ENST00000296824 MUC17Q685J3 4493 aa4.07□□□□□ -1.76
CCDC127-201ENST00000296824 KRTAP4-3Q9BYR4 195 aa4.06□□□□□ -1.76
CCDC127-201ENST00000296824 ABCA13Q86UQ4 5058 aa4.05□□□□□ -1.76
CCDC127-201ENST00000296824 PCLOQ9Y6V0 5065 aa3.97□□□□□ -1.77
CCDC127-201ENST00000296824 KRTAP19-7Q3SYF9 63 aa3.97□□□□□ -1.77
CCDC127-201ENST00000296824 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
CCDC127-201ENST00000296824 EPPK1P58107 5090 aaKnown RBP3.92□□□□□ -1.78
CCDC127-201ENST00000296824 SYNE2Q8WXH0 6885 aaKnown RBP3.9□□□□□ -1.78
CCDC127-201ENST00000296824 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
CCDC127-201ENST00000296824 KRTAP19-2Q3LHN2 52 aa3.89□□□□□ -1.79
CCDC127-201ENST00000296824 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.82□□□□□ -1.8
CCDC127-201ENST00000296824 LCE2AQ5TA79 106 aaPredicted RBP3.81□□□□□ -1.8
CCDC127-201ENST00000296824 UBR4Q5T4S7 5183 aa3.77□□□□□ -1.81
CCDC127-201ENST00000296824 FAT4Q6V0I7 4981 aa3.76□□□□□ -1.81
CCDC127-201ENST00000296824 FSIP2Q5CZC0 6907 aa3.73□□□□□ -1.81
CCDC127-201ENST00000296824 SYNE1Q8NF91 8797 aaKnown RBP3.71□□□□□ -1.82
CCDC127-201ENST00000296824 HMCN2Q8NDA2 5059 aa3.68□□□□□ -1.82
CCDC127-201ENST00000296824 RNF213Q63HN8 5207 aa3.65□□□□□ -1.83
CCDC127-201ENST00000296824 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
CCDC127-201ENST00000296824 MUC2Q02817 5179 aa3.53□□□□□ -1.84
CCDC127-201ENST00000296824 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
CCDC127-201ENST00000296824 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
CCDC127-201ENST00000296824 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
CCDC127-201ENST00000296824 FCGBPQ9Y6R7 5405 aaPredicted RBP3.31□□□□□ -1.88
CCDC127-201ENST00000296824 DSTQ03001 7570 aaKnown RBP3.27□□□□□ -1.89
CCDC127-201ENST00000296824 USH2AO75445 5202 aa3.21□□□□□ -1.9
CCDC127-201ENST00000296824 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
CCDC127-201ENST00000296824 KMT2DO14686 5537 aa3.15□□□□□ -1.9
CCDC127-201ENST00000296824 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
CCDC127-201ENST00000296824 KRTAP4-6Q9BYQ5 205 aa3.08□□□□□ -1.92
CCDC127-201ENST00000296824 MACF1Q9UPN3 7388 aaKnown RBP3.06□□□□□ -1.92
CCDC127-201ENST00000296824 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
CCDC127-201ENST00000296824 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
CCDC127-201ENST00000296824 KRTAP4-2Q9BYR5 136 aa2.97□□□□□ -1.93
CCDC127-201ENST00000296824 NEBP20929 6669 aa2.96□□□□□ -1.94
CCDC127-201ENST00000296824 SSPOA2VEC9 5147 aa2.94□□□□□ -1.94
CCDC127-201ENST00000296824 MUC12Q9UKN1 5478 aa2.93□□□□□ -1.94
CCDC127-201ENST00000296824 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
CCDC127-201ENST00000296824 MDN1Q9NU22 5596 aa2.76□□□□□ -1.97
CCDC127-201ENST00000296824 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
CCDC127-201ENST00000296824 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
CCDC127-201ENST00000296824 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
CCDC127-201ENST00000296824 GPR98Q8WXG9 6306 aa2.64□□□□□ -1.99
CCDC127-201ENST00000296824 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
CCDC127-201ENST00000296824 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.04
CCDC127-201ENST00000296824 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
CCDC127-201ENST00000296824 HMCN1Q96RW7 5635 aa2.3□□□□□ -2.04
CCDC127-201ENST00000296824 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.04
CCDC127-201ENST00000296824 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
CCDC127-201ENST00000296824 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
CCDC127-201ENST00000296824 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
CCDC127-201ENST00000296824 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.09
CCDC127-201ENST00000296824 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
CCDC127-201ENST00000296824 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
CCDC127-201ENST00000296824 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.1
CCDC127-201ENST00000296824 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
CCDC127-201ENST00000296824 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
CCDC127-201ENST00000296824 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 82.7 ms