RNA–Protein interactions for RNA: ENST00000295872.8

SPICE1-201, Transcript of spindle and centriole associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPICE1, Length 5,417 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPICE1-201ENST00000295872 LCE3BQ5TA77 95 aa4.41□□□□□ -1.7
SPICE1-201ENST00000295872 MT1LQ93083 61 aa4.41□□□□□ -1.7
SPICE1-201ENST00000295872 MT1EP04732 61 aa4.4□□□□□ -1.7
SPICE1-201ENST00000295872 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
SPICE1-201ENST00000295872 MT1MQ8N339 61 aa4.26□□□□□ -1.73
SPICE1-201ENST00000295872 KRTAP9-7A8MTY7 169 aa4.24□□□□□ -1.73
SPICE1-201ENST00000295872 LCE3DQ9BYE3 92 aa4.2□□□□□ -1.74
SPICE1-201ENST00000295872 MUC2Q02817 5179 aa4.2□□□□□ -1.74
SPICE1-201ENST00000295872 MT4P47944 62 aa4.18□□□□□ -1.74
SPICE1-201ENST00000295872 KRTAP6-3Q3LI67 103 aa4.16□□□□□ -1.74
SPICE1-201ENST00000295872 KRTAP19-7Q3SYF9 63 aa4.14□□□□□ -1.75
SPICE1-201ENST00000295872 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
SPICE1-201ENST00000295872 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.13□□□□□ -1.75
SPICE1-201ENST00000295872 KRTAP20-1Q3LI63 56 aa4.12□□□□□ -1.75
SPICE1-201ENST00000295872 SYNE2Q8WXH0 6885 aaKnown RBP4.09□□□□□ -1.75
SPICE1-201ENST00000295872 KRTAP4-3Q9BYR4 195 aa4.09□□□□□ -1.76
SPICE1-201ENST00000295872 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
SPICE1-201ENST00000295872 MT3P25713 68 aa4.04□□□□□ -1.76
SPICE1-201ENST00000295872 LCE1AQ5T7P2 110 aa4.04□□□□□ -1.76
SPICE1-201ENST00000295872 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
SPICE1-201ENST00000295872 KRTAP2-3P0C7H8 128 aa3.99□□□□□ -1.77
SPICE1-201ENST00000295872 KRTAP2-4Q9BYR9 128 aa3.99□□□□□ -1.77
SPICE1-201ENST00000295872 MT1AP04731 61 aa3.93□□□□□ -1.78
SPICE1-201ENST00000295872 KRTAP2-1Q9BYU5 128 aa3.88□□□□□ -1.79
SPICE1-201ENST00000295872 USH2AO75445 5202 aa3.88□□□□□ -1.79
SPICE1-201ENST00000295872 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
SPICE1-201ENST00000295872 LCE5AQ5TCM9 118 aa3.85□□□□□ -1.79
SPICE1-201ENST00000295872 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
SPICE1-201ENST00000295872 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
SPICE1-201ENST00000295872 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
SPICE1-201ENST00000295872 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
SPICE1-201ENST00000295872 KRTAP4-9Q9BYQ8 210 aa3.74□□□□□ -1.81
SPICE1-201ENST00000295872 PRM1P04553 51 aa3.74□□□□□ -1.81
SPICE1-201ENST00000295872 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
SPICE1-201ENST00000295872 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
SPICE1-201ENST00000295872 MACF1Q9UPN3 7388 aaKnown RBP3.65□□□□□ -1.82
SPICE1-201ENST00000295872 KRTAP9-4Q9BYQ2 154 aa3.62□□□□□ -1.83
SPICE1-201ENST00000295872 FCGBPQ9Y6R7 5405 aaPredicted RBP3.62□□□□□ -1.83
SPICE1-201ENST00000295872 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
SPICE1-201ENST00000295872 KRTAP5-9P26371 169 aa3.61□□□□□ -1.83
SPICE1-201ENST00000295872 SSPOA2VEC9 5147 aa3.6□□□□□ -1.83
SPICE1-201ENST00000295872 NEBP20929 6669 aa3.58□□□□□ -1.84
SPICE1-201ENST00000295872 KMT2DO14686 5537 aa3.57□□□□□ -1.84
SPICE1-201ENST00000295872 DSTQ03001 7570 aaKnown RBP3.5□□□□□ -1.85
SPICE1-201ENST00000295872 MUC12Q9UKN1 5478 aa3.37□□□□□ -1.87
SPICE1-201ENST00000295872 MDN1Q9NU22 5596 aa3.34□□□□□ -1.88
SPICE1-201ENST00000295872 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
SPICE1-201ENST00000295872 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
SPICE1-201ENST00000295872 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
SPICE1-201ENST00000295872 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
SPICE1-201ENST00000295872 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
SPICE1-201ENST00000295872 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
SPICE1-201ENST00000295872 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
SPICE1-201ENST00000295872 KRTAP5-4Q6L8H1 288 aa3.06□□□□□ -1.92
SPICE1-201ENST00000295872 KRTAP5-5Q701N2 237 aaPredicted RBP2.93□□□□□ -1.94
SPICE1-201ENST00000295872 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
SPICE1-201ENST00000295872 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
SPICE1-201ENST00000295872 KRTAP5-3Q6L8H2 238 aa2.79□□□□□ -1.96
SPICE1-201ENST00000295872 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
SPICE1-201ENST00000295872 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
SPICE1-201ENST00000295872 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
SPICE1-201ENST00000295872 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
SPICE1-201ENST00000295872 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
SPICE1-201ENST00000295872 HMCN1Q96RW7 5635 aa2.63□□□□□ -1.99
SPICE1-201ENST00000295872 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
SPICE1-201ENST00000295872 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
SPICE1-201ENST00000295872 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
SPICE1-201ENST00000295872 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
SPICE1-201ENST00000295872 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
SPICE1-201ENST00000295872 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
SPICE1-201ENST00000295872 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
SPICE1-201ENST00000295872 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
SPICE1-201ENST00000295872 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
SPICE1-201ENST00000295872 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
SPICE1-201ENST00000295872 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
SPICE1-201ENST00000295872 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
SPICE1-201ENST00000295872 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 40.5 ms