RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 MT1EP04732 61 aa5.01□□□□□ -1.61
SSRP1-202ENST00000293880 MUC17Q685J3 4493 aa5.01□□□□□ -1.61
SSRP1-202ENST00000293880 KRTAP9-6A0A140TA67 174 aa4.99□□□□□ -1.61
SSRP1-202ENST00000293880 LCE1BQ5T7P3 118 aa4.98□□□□□ -1.61
SSRP1-202ENST00000293880 FLGP20930 4061 aaPredicted RBP4.95□□□□□ -1.62
SSRP1-202ENST00000293880 ABCA13Q86UQ4 5058 aa4.93□□□□□ -1.62
SSRP1-202ENST00000293880 LCE1DQ5T752 114 aa4.91□□□□□ -1.62
SSRP1-202ENST00000293880 KRTAP19-6Q3LI70 58 aa4.91□□□□□ -1.62
SSRP1-202ENST00000293880 MT1MQ8N339 61 aa4.89□□□□□ -1.63
SSRP1-202ENST00000293880 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
SSRP1-202ENST00000293880 MT3P25713 68 aa4.84□□□□□ -1.64
SSRP1-202ENST00000293880 LCE2AQ5TA79 106 aaPredicted RBP4.84□□□□□ -1.64
SSRP1-202ENST00000293880 UBR4Q5T4S7 5183 aa4.79□□□□□ -1.64
SSRP1-202ENST00000293880 FAT4Q6V0I7 4981 aa4.78□□□□□ -1.64
SSRP1-202ENST00000293880 KRTAP9-7A8MTY7 169 aa4.7□□□□□ -1.66
SSRP1-202ENST00000293880 RNF213Q63HN8 5207 aa4.68□□□□□ -1.66
SSRP1-202ENST00000293880 KRTAP20-1Q3LI63 56 aa4.66□□□□□ -1.66
SSRP1-202ENST00000293880 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
SSRP1-202ENST00000293880 HMCN2Q8NDA2 5059 aa4.6□□□□□ -1.67
SSRP1-202ENST00000293880 MUC2Q02817 5179 aa4.6□□□□□ -1.67
SSRP1-202ENST00000293880 SYNE2Q8WXH0 6885 aaKnown RBP4.56□□□□□ -1.68
SSRP1-202ENST00000293880 KRTAP2-3P0C7H8 128 aa4.53□□□□□ -1.68
SSRP1-202ENST00000293880 KRTAP2-4Q9BYR9 128 aa4.53□□□□□ -1.68
SSRP1-202ENST00000293880 KRTAP2-1Q9BYU5 128 aa4.53□□□□□ -1.68
SSRP1-202ENST00000293880 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.49□□□□□ -1.69
SSRP1-202ENST00000293880 KRTAP19-7Q3SYF9 63 aa4.49□□□□□ -1.69
SSRP1-202ENST00000293880 MT1AP04731 61 aa4.48□□□□□ -1.69
SSRP1-202ENST00000293880 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
SSRP1-202ENST00000293880 SYNE1Q8NF91 8797 aaKnown RBP4.47□□□□□ -1.69
SSRP1-202ENST00000293880 KRTAP6-3Q3LI67 103 aa4.45□□□□□ -1.7
SSRP1-202ENST00000293880 KRTAP6-1Q3LI64 71 aa4.39□□□□□ -1.71
SSRP1-202ENST00000293880 LCE4AQ5TA78 99 aa4.36□□□□□ -1.71
SSRP1-202ENST00000293880 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
SSRP1-202ENST00000293880 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
SSRP1-202ENST00000293880 LCE1FQ5T754 118 aa4.3□□□□□ -1.72
SSRP1-202ENST00000293880 LCE1AQ5T7P2 110 aa4.3□□□□□ -1.72
SSRP1-202ENST00000293880 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
SSRP1-202ENST00000293880 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
SSRP1-202ENST00000293880 KRTAP2-2Q9BYT5 123 aa4.24□□□□□ -1.73
SSRP1-202ENST00000293880 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
SSRP1-202ENST00000293880 USH2AO75445 5202 aa3.96□□□□□ -1.78
SSRP1-202ENST00000293880 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
SSRP1-202ENST00000293880 DSTQ03001 7570 aaKnown RBP3.93□□□□□ -1.78
SSRP1-202ENST00000293880 FCGBPQ9Y6R7 5405 aaPredicted RBP3.93□□□□□ -1.78
SSRP1-202ENST00000293880 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
SSRP1-202ENST00000293880 KMT2DO14686 5537 aa3.89□□□□□ -1.79
SSRP1-202ENST00000293880 NEBP20929 6669 aa3.77□□□□□ -1.81
SSRP1-202ENST00000293880 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
SSRP1-202ENST00000293880 KRTAP4-6Q9BYQ5 205 aa3.7□□□□□ -1.82
SSRP1-202ENST00000293880 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
SSRP1-202ENST00000293880 SSPOA2VEC9 5147 aa3.67□□□□□ -1.82
SSRP1-202ENST00000293880 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
SSRP1-202ENST00000293880 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
SSRP1-202ENST00000293880 MUC12Q9UKN1 5478 aa3.56□□□□□ -1.84
SSRP1-202ENST00000293880 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
SSRP1-202ENST00000293880 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
SSRP1-202ENST00000293880 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
SSRP1-202ENST00000293880 MUC19Q7Z5P9 8384 aa3.44□□□□□ -1.86
SSRP1-202ENST00000293880 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
SSRP1-202ENST00000293880 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
SSRP1-202ENST00000293880 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
SSRP1-202ENST00000293880 KRTAP5-3Q6L8H2 238 aa2.99□□□□□ -1.93
SSRP1-202ENST00000293880 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
SSRP1-202ENST00000293880 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
SSRP1-202ENST00000293880 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
SSRP1-202ENST00000293880 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
SSRP1-202ENST00000293880 PHGR1C9JFL3 82 aa2.54□□□□□ -2
SSRP1-202ENST00000293880 KRTAP5-2Q701N4 177 aa2.48□□□□□ -2.01
SSRP1-202ENST00000293880 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
SSRP1-202ENST00000293880 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
SSRP1-202ENST00000293880 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
SSRP1-202ENST00000293880 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
SSRP1-202ENST00000293880 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
SSRP1-202ENST00000293880 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
SSRP1-202ENST00000293880 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
SSRP1-202ENST00000293880 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
SSRP1-202ENST00000293880 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
SSRP1-202ENST00000293880 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 113.9 ms