RNA–Protein interactions for RNA: ENST00000293373.10

NCKAP1L-201, Transcript of NCK associated protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1L, Length 9,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-201ENST00000293373 LCE3BQ5TA77 95 aa2.62□□□□□ -1.99
NCKAP1L-201ENST00000293373 SPRR5A0A1B0GTR4 108 aa2.61□□□□□ -1.99
NCKAP1L-201ENST00000293373 LPAP08519 4548 aa2.58□□□□□ -2
NCKAP1L-201ENST00000293373 MT1MQ8N339 61 aa2.57□□□□□ -2
NCKAP1L-201ENST00000293373 KRTAP6-3Q3LI67 103 aa2.49□□□□□ -2.01
NCKAP1L-201ENST00000293373 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
NCKAP1L-201ENST00000293373 KRTAP4-7Q9BYR0 210 aa2.47□□□□□ -2.01
NCKAP1L-201ENST00000293373 LCE3EQ5T5B0 92 aa2.46□□□□□ -2.02
NCKAP1L-201ENST00000293373 USH2AO75445 5202 aa2.44□□□□□ -2.02
NCKAP1L-201ENST00000293373 KRTAP20-1Q3LI63 56 aa2.44□□□□□ -2.02
NCKAP1L-201ENST00000293373 KRTAP19-7Q3SYF9 63 aa2.44□□□□□ -2.02
NCKAP1L-201ENST00000293373 LCE1AQ5T7P2 110 aa2.43□□□□□ -2.02
NCKAP1L-201ENST00000293373 MT4P47944 62 aa2.42□□□□□ -2.02
NCKAP1L-201ENST00000293373 KRTAP9-7A8MTY7 169 aa2.41□□□□□ -2.02
NCKAP1L-201ENST00000293373 SYNE2Q8WXH0 6885 aaKnown RBP2.41□□□□□ -2.02
NCKAP1L-201ENST00000293373 MT1AP04731 61 aa2.4□□□□□ -2.03
NCKAP1L-201ENST00000293373 FSIP2Q5CZC0 6907 aa2.38□□□□□ -2.03
NCKAP1L-201ENST00000293373 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.38□□□□□ -2.03
NCKAP1L-201ENST00000293373 KRTAP2-3P0C7H8 128 aa2.36□□□□□ -2.03
NCKAP1L-201ENST00000293373 KRTAP2-4Q9BYR9 128 aa2.36□□□□□ -2.03
NCKAP1L-201ENST00000293373 LOC100996750A0A140TA64 210 aa2.35□□□□□ -2.03
NCKAP1L-201ENST00000293373 KRTAP4-3Q9BYR4 195 aa2.34□□□□□ -2.03
NCKAP1L-201ENST00000293373 MUC2Q02817 5179 aa2.33□□□□□ -2.04
NCKAP1L-201ENST00000293373 LCE5AQ5TCM9 118 aa2.3□□□□□ -2.04
NCKAP1L-201ENST00000293373 SSPOA2VEC9 5147 aa2.3□□□□□ -2.04
NCKAP1L-201ENST00000293373 LCE4AQ5TA78 99 aa2.3□□□□□ -2.04
NCKAP1L-201ENST00000293373 NEBP20929 6669 aa2.27□□□□□ -2.05
NCKAP1L-201ENST00000293373 KRTAP2-2Q9BYT5 123 aa2.26□□□□□ -2.05
NCKAP1L-201ENST00000293373 KRTAP2-1Q9BYU5 128 aa2.26□□□□□ -2.05
NCKAP1L-201ENST00000293373 LCE1DQ5T752 114 aa2.23□□□□□ -2.05
NCKAP1L-201ENST00000293373 KRTAP9-4Q9BYQ2 154 aa2.2□□□□□ -2.06
NCKAP1L-201ENST00000293373 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
NCKAP1L-201ENST00000293373 KRTAP6-1Q3LI64 71 aa2.18□□□□□ -2.06
NCKAP1L-201ENST00000293373 KRTAP5-9P26371 169 aa2.16□□□□□ -2.06
NCKAP1L-201ENST00000293373 PRM1P04553 51 aa2.14□□□□□ -2.07
NCKAP1L-201ENST00000293373 KRTAP6-2Q3LI66 62 aa2.14□□□□□ -2.07
NCKAP1L-201ENST00000293373 KRTAP4-9Q9BYQ8 210 aa2.12□□□□□ -2.07
NCKAP1L-201ENST00000293373 KRTAP9-6A8MVA2 160 aa2.1□□□□□ -2.07
NCKAP1L-201ENST00000293373 FCGBPQ9Y6R7 5405 aaPredicted RBP2.08□□□□□ -2.08
NCKAP1L-201ENST00000293373 KRTAP4-6Q9BYQ5 205 aa2.08□□□□□ -2.08
NCKAP1L-201ENST00000293373 MDN1Q9NU22 5596 aa2.07□□□□□ -2.08
NCKAP1L-201ENST00000293373 KMT2DO14686 5537 aa1.98□□□□□ -2.09
NCKAP1L-201ENST00000293373 KRTAP9-9Q9BYP9 154 aa1.92□□□□□ -2.1
NCKAP1L-201ENST00000293373 MACF1Q9UPN3 7388 aaKnown RBP1.92□□□□□ -2.1
NCKAP1L-201ENST00000293373 KRTAP20-2Q3LI61 65 aa1.91□□□□□ -2.1
NCKAP1L-201ENST00000293373 KRTAP4-12Q9BQ66 201 aa1.88□□□□□ -2.11
NCKAP1L-201ENST00000293373 KRTAP5-4Q6L8H1 288 aa1.88□□□□□ -2.11
NCKAP1L-201ENST00000293373 MUC12Q9UKN1 5478 aa1.88□□□□□ -2.11
NCKAP1L-201ENST00000293373 SYNE1Q8NF91 8797 aaKnown RBP1.87□□□□□ -2.11
NCKAP1L-201ENST00000293373 LCE1CQ5T751 118 aa1.86□□□□□ -2.11
NCKAP1L-201ENST00000293373 LCE1EQ5T753 118 aa1.86□□□□□ -2.11
NCKAP1L-201ENST00000293373 LCE1FQ5T754 118 aa1.86□□□□□ -2.11
NCKAP1L-201ENST00000293373 GPR98Q8WXG9 6306 aa1.84□□□□□ -2.11
NCKAP1L-201ENST00000293373 AHNAK2Q8IVF2 5795 aa1.82□□□□□ -2.12
NCKAP1L-201ENST00000293373 KRTAP5-5Q701N2 237 aaPredicted RBP1.75□□□□□ -2.13
NCKAP1L-201ENST00000293373 HMCN1Q96RW7 5635 aa1.75□□□□□ -2.13
NCKAP1L-201ENST00000293373 OBSCNQ5VST9 7968 aa1.74□□□□□ -2.13
NCKAP1L-201ENST00000293373 KRTAP4-11Q9BYQ6 195 aa1.71□□□□□ -2.14
NCKAP1L-201ENST00000293373 KRTAP4-2Q9BYR5 136 aa1.69□□□□□ -2.14
NCKAP1L-201ENST00000293373 KRTAP5-3Q6L8H2 238 aa1.64□□□□□ -2.15
NCKAP1L-201ENST00000293373 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
NCKAP1L-201ENST00000293373 DSTQ03001 7570 aaKnown RBP1.63□□□□□ -2.15
NCKAP1L-201ENST00000293373 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
NCKAP1L-201ENST00000293373 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
NCKAP1L-201ENST00000293373 KRTAP5-2Q701N4 177 aa1.49□□□□□ -2.17
NCKAP1L-201ENST00000293373 KRTAP4-4Q9BYR3 166 aa1.49□□□□□ -2.17
NCKAP1L-201ENST00000293373 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
NCKAP1L-201ENST00000293373 KRTAP5-8O75690 187 aa1.44□□□□□ -2.18
NCKAP1L-201ENST00000293373 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
NCKAP1L-201ENST00000293373 KRTAP5-11Q6L8G4 156 aa1.29□□□□□ -2.2
NCKAP1L-201ENST00000293373 KRTAP5-1Q6L8H4 278 aa1.27□□□□□ -2.21
NCKAP1L-201ENST00000293373 KRTAP5-7Q6L8G8 165 aa1.25□□□□□ -2.21
NCKAP1L-201ENST00000293373 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
NCKAP1L-201ENST00000293373 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.2□□□□□ -2.22
NCKAP1L-201ENST00000293373 KRTAP21-2Q3LI59 83 aa1.17□□□□□ -2.22
NCKAP1L-201ENST00000293373 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
NCKAP1L-201ENST00000293373 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 185.3 ms