RNA–Protein interactions for RNA: ENST00000292174.4

CXCR5-201, Transcript of C-X-C motif chemokine receptor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCR5, Length 4,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR5-201ENST00000292174 SPRR2DP22532 72 aa4.49□□□□□ -1.69
CXCR5-201ENST00000292174 MT1LQ93083 61 aa4.48□□□□□ -1.69
CXCR5-201ENST00000292174 MUC2Q02817 5179 aa4.38□□□□□ -1.71
CXCR5-201ENST00000292174 KRTAP9-6A0A140TA67 174 aa4.35□□□□□ -1.71
CXCR5-201ENST00000292174 KRTAP9-4Q9BYQ2 154 aa4.34□□□□□ -1.71
CXCR5-201ENST00000292174 KRTAP19-7Q3SYF9 63 aa4.33□□□□□ -1.72
CXCR5-201ENST00000292174 MT1MQ8N339 61 aa4.32□□□□□ -1.72
CXCR5-201ENST00000292174 KRTAP9-7A8MTY7 169 aa4.3□□□□□ -1.72
CXCR5-201ENST00000292174 KRTAP2-3P0C7H8 128 aa4.29□□□□□ -1.72
CXCR5-201ENST00000292174 KRTAP2-4Q9BYR9 128 aa4.29□□□□□ -1.72
CXCR5-201ENST00000292174 KRTAP2-1Q9BYU5 128 aa4.29□□□□□ -1.72
CXCR5-201ENST00000292174 SYNE1Q8NF91 8797 aaKnown RBP4.27□□□□□ -1.73
CXCR5-201ENST00000292174 KRTAP9-9Q9BYP9 154 aa4.24□□□□□ -1.73
CXCR5-201ENST00000292174 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
CXCR5-201ENST00000292174 LCE3BQ5TA77 95 aa4.2□□□□□ -1.74
CXCR5-201ENST00000292174 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
CXCR5-201ENST00000292174 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
CXCR5-201ENST00000292174 LCE5AQ5TCM9 118 aa4.19□□□□□ -1.74
CXCR5-201ENST00000292174 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
CXCR5-201ENST00000292174 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
CXCR5-201ENST00000292174 DSTQ03001 7570 aaKnown RBP4.12□□□□□ -1.75
CXCR5-201ENST00000292174 USH2AO75445 5202 aa4.07□□□□□ -1.76
CXCR5-201ENST00000292174 LCE3EQ5T5B0 92 aa4.07□□□□□ -1.76
CXCR5-201ENST00000292174 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.06□□□□□ -1.76
CXCR5-201ENST00000292174 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
CXCR5-201ENST00000292174 PRM1P04553 51 aa4.02□□□□□ -1.77
CXCR5-201ENST00000292174 KRTAP4-3Q9BYR4 195 aa4.02□□□□□ -1.77
CXCR5-201ENST00000292174 MT1AP04731 61 aa4□□□□□ -1.77
CXCR5-201ENST00000292174 KMT2DO14686 5537 aa3.99□□□□□ -1.77
CXCR5-201ENST00000292174 MT3P25713 68 aa3.98□□□□□ -1.77
CXCR5-201ENST00000292174 MACF1Q9UPN3 7388 aaKnown RBP3.97□□□□□ -1.77
CXCR5-201ENST00000292174 LOC100996750A0A140TA64 210 aa3.95□□□□□ -1.78
CXCR5-201ENST00000292174 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
CXCR5-201ENST00000292174 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
CXCR5-201ENST00000292174 KRTAP20-1Q3LI63 56 aa3.88□□□□□ -1.79
CXCR5-201ENST00000292174 KRTAP5-9P26371 169 aa3.86□□□□□ -1.79
CXCR5-201ENST00000292174 MT4P47944 62 aa3.84□□□□□ -1.79
CXCR5-201ENST00000292174 FCGBPQ9Y6R7 5405 aaPredicted RBP3.79□□□□□ -1.8
CXCR5-201ENST00000292174 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
CXCR5-201ENST00000292174 SSPOA2VEC9 5147 aa3.75□□□□□ -1.81
CXCR5-201ENST00000292174 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
CXCR5-201ENST00000292174 KRTAP4-12Q9BQ66 201 aa3.6□□□□□ -1.83
CXCR5-201ENST00000292174 KRTAP4-9Q9BYQ8 210 aa3.6□□□□□ -1.83
CXCR5-201ENST00000292174 MDN1Q9NU22 5596 aa3.58□□□□□ -1.84
CXCR5-201ENST00000292174 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
CXCR5-201ENST00000292174 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
CXCR5-201ENST00000292174 MUC12Q9UKN1 5478 aa3.54□□□□□ -1.84
CXCR5-201ENST00000292174 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.84
CXCR5-201ENST00000292174 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
CXCR5-201ENST00000292174 NEBP20929 6669 aa3.47□□□□□ -1.85
CXCR5-201ENST00000292174 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
CXCR5-201ENST00000292174 KRTAP4-6Q9BYQ5 205 aa3.37□□□□□ -1.87
CXCR5-201ENST00000292174 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
CXCR5-201ENST00000292174 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
CXCR5-201ENST00000292174 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
CXCR5-201ENST00000292174 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
CXCR5-201ENST00000292174 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
CXCR5-201ENST00000292174 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
CXCR5-201ENST00000292174 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
CXCR5-201ENST00000292174 KRTAP5-3Q6L8H2 238 aa2.78□□□□□ -1.96
CXCR5-201ENST00000292174 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.96
CXCR5-201ENST00000292174 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
CXCR5-201ENST00000292174 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
CXCR5-201ENST00000292174 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
CXCR5-201ENST00000292174 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
CXCR5-201ENST00000292174 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
CXCR5-201ENST00000292174 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
CXCR5-201ENST00000292174 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
CXCR5-201ENST00000292174 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
CXCR5-201ENST00000292174 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
CXCR5-201ENST00000292174 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
CXCR5-201ENST00000292174 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
CXCR5-201ENST00000292174 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
CXCR5-201ENST00000292174 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
CXCR5-201ENST00000292174 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
CXCR5-201ENST00000292174 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
CXCR5-201ENST00000292174 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 76.5 ms