RNA–Protein interactions for RNA: ENST00000290158.8

KPNB1-201, Transcript of karyopherin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNB1, Length 6,139 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-201ENST00000290158 FLGP20930 4061 aaPredicted RBP3.17□□□□□ -1.9
KPNB1-201ENST00000290158 KMT2CQ8NEZ4 4911 aaKnown RBP3.17□□□□□ -1.9
KPNB1-201ENST00000290158 LCE2AQ5TA79 106 aaPredicted RBP3.16□□□□□ -1.9
KPNB1-201ENST00000290158 KRTAP20-1Q3LI63 56 aa3.16□□□□□ -1.9
KPNB1-201ENST00000290158 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
KPNB1-201ENST00000290158 MT1MQ8N339 61 aa3.14□□□□□ -1.91
KPNB1-201ENST00000290158 KRTAP9-7A8MTY7 169 aa3.11□□□□□ -1.91
KPNB1-201ENST00000290158 EPPK1P58107 5090 aaKnown RBP3.11□□□□□ -1.91
KPNB1-201ENST00000290158 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
KPNB1-201ENST00000290158 LCE1DQ5T752 114 aa3.08□□□□□ -1.92
KPNB1-201ENST00000290158 KRTAP4-9Q9BYQ8 210 aa3.06□□□□□ -1.92
KPNB1-201ENST00000290158 KRTAP2-3P0C7H8 128 aa3.03□□□□□ -1.92
KPNB1-201ENST00000290158 KRTAP2-4Q9BYR9 128 aa3.03□□□□□ -1.92
KPNB1-201ENST00000290158 KRTAP2-1Q9BYU5 128 aa3.03□□□□□ -1.92
KPNB1-201ENST00000290158 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.97□□□□□ -1.93
KPNB1-201ENST00000290158 ABCA13Q86UQ4 5058 aa2.95□□□□□ -1.94
KPNB1-201ENST00000290158 LCE5AQ5TCM9 118 aa2.95□□□□□ -1.94
KPNB1-201ENST00000290158 KRTAP6-3Q3LI67 103 aa2.93□□□□□ -1.94
KPNB1-201ENST00000290158 FAT4Q6V0I7 4981 aa2.91□□□□□ -1.94
KPNB1-201ENST00000290158 SYNE2Q8WXH0 6885 aaKnown RBP2.89□□□□□ -1.95
KPNB1-201ENST00000290158 FSIP2Q5CZC0 6907 aa2.89□□□□□ -1.95
KPNB1-201ENST00000290158 KRTAP19-7Q3SYF9 63 aa2.87□□□□□ -1.95
KPNB1-201ENST00000290158 HMCN2Q8NDA2 5059 aa2.86□□□□□ -1.95
KPNB1-201ENST00000290158 MT1AP04731 61 aa2.84□□□□□ -1.95
KPNB1-201ENST00000290158 KRTAP2-2Q9BYT5 123 aa2.8□□□□□ -1.96
KPNB1-201ENST00000290158 RNF213Q63HN8 5207 aa2.79□□□□□ -1.96
KPNB1-201ENST00000290158 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
KPNB1-201ENST00000290158 LCE1AQ5T7P2 110 aa2.76□□□□□ -1.97
KPNB1-201ENST00000290158 LCE4AQ5TA78 99 aa2.75□□□□□ -1.97
KPNB1-201ENST00000290158 KRTAP6-1Q3LI64 71 aa2.75□□□□□ -1.97
KPNB1-201ENST00000290158 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
KPNB1-201ENST00000290158 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
KPNB1-201ENST00000290158 LCE1CQ5T751 118 aa2.71□□□□□ -1.97
KPNB1-201ENST00000290158 LCE1EQ5T753 118 aa2.71□□□□□ -1.97
KPNB1-201ENST00000290158 LCE1FQ5T754 118 aa2.71□□□□□ -1.97
KPNB1-201ENST00000290158 UBR4Q5T4S7 5183 aa2.71□□□□□ -1.97
KPNB1-201ENST00000290158 KRTAP9-4Q9BYQ2 154 aa2.69□□□□□ -1.98
KPNB1-201ENST00000290158 MUC2Q02817 5179 aa2.66□□□□□ -1.98
KPNB1-201ENST00000290158 KRTAP9-9Q9BYP9 154 aa2.53□□□□□ -2
KPNB1-201ENST00000290158 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
KPNB1-201ENST00000290158 KRTAP4-6Q9BYQ5 205 aa2.43□□□□□ -2.02
KPNB1-201ENST00000290158 KRTAP4-11Q9BYQ6 195 aa2.41□□□□□ -2.02
KPNB1-201ENST00000290158 MACF1Q9UPN3 7388 aaKnown RBP2.4□□□□□ -2.02
KPNB1-201ENST00000290158 NEBP20929 6669 aa2.38□□□□□ -2.03
KPNB1-201ENST00000290158 KRTAP5-9P26371 169 aa2.36□□□□□ -2.03
KPNB1-201ENST00000290158 KMT2DO14686 5537 aa2.36□□□□□ -2.03
KPNB1-201ENST00000290158 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
KPNB1-201ENST00000290158 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.05
KPNB1-201ENST00000290158 SSPOA2VEC9 5147 aa2.26□□□□□ -2.05
KPNB1-201ENST00000290158 USH2AO75445 5202 aa2.25□□□□□ -2.05
KPNB1-201ENST00000290158 KRTAP4-12Q9BQ66 201 aa2.25□□□□□ -2.05
KPNB1-201ENST00000290158 KRTAP4-2Q9BYR5 136 aa2.25□□□□□ -2.05
KPNB1-201ENST00000290158 FCGBPQ9Y6R7 5405 aaPredicted RBP2.17□□□□□ -2.06
KPNB1-201ENST00000290158 DSTQ03001 7570 aaKnown RBP2.16□□□□□ -2.06
KPNB1-201ENST00000290158 KRTAP5-4Q6L8H1 288 aa2.16□□□□□ -2.06
KPNB1-201ENST00000290158 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.06
KPNB1-201ENST00000290158 MUC12Q9UKN1 5478 aa2.01□□□□□ -2.09
KPNB1-201ENST00000290158 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
KPNB1-201ENST00000290158 GPR98Q8WXG9 6306 aa1.96□□□□□ -2.1
KPNB1-201ENST00000290158 HMCN1Q96RW7 5635 aa1.94□□□□□ -2.1
KPNB1-201ENST00000290158 KRTAP5-3Q6L8H2 238 aa1.92□□□□□ -2.1
KPNB1-201ENST00000290158 MDN1Q9NU22 5596 aa1.83□□□□□ -2.12
KPNB1-201ENST00000290158 MUC5BQ9HC84 5762 aaPredicted RBP1.82□□□□□ -2.12
KPNB1-201ENST00000290158 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
KPNB1-201ENST00000290158 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
KPNB1-201ENST00000290158 KRTAP5-10Q6L8G5 202 aa1.63□□□□□ -2.15
KPNB1-201ENST00000290158 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
KPNB1-201ENST00000290158 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
KPNB1-201ENST00000290158 KRTAP5-2Q701N4 177 aa1.55□□□□□ -2.16
KPNB1-201ENST00000290158 AHNAKQ09666 5890 aaKnown RBP1.5□□□□□ -2.17
KPNB1-201ENST00000290158 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.48□□□□□ -2.17
KPNB1-201ENST00000290158 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
KPNB1-201ENST00000290158 KRTAP5-7Q6L8G8 165 aa1.44□□□□□ -2.18
KPNB1-201ENST00000290158 KRTAP5-1Q6L8H4 278 aa1.42□□□□□ -2.18
KPNB1-201ENST00000290158 KRTAP5-11Q6L8G4 156 aa1.38□□□□□ -2.19
KPNB1-201ENST00000290158 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
KPNB1-201ENST00000290158 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms