RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.79
NPC1L1-201ENST00000289547 LCE3BQ5TA77 95 aa3.84□□□□□ -1.79
NPC1L1-201ENST00000289547 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.82□□□□□ -1.8
NPC1L1-201ENST00000289547 MT1EP04732 61 aa3.8□□□□□ -1.8
NPC1L1-201ENST00000289547 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
NPC1L1-201ENST00000289547 MT1LQ93083 61 aa3.75□□□□□ -1.81
NPC1L1-201ENST00000289547 FSIP2Q5CZC0 6907 aa3.75□□□□□ -1.81
NPC1L1-201ENST00000289547 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
NPC1L1-201ENST00000289547 KRTAP4-7Q9BYR0 210 aa3.72□□□□□ -1.81
NPC1L1-201ENST00000289547 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
NPC1L1-201ENST00000289547 MT1MQ8N339 61 aa3.67□□□□□ -1.82
NPC1L1-201ENST00000289547 MUC2Q02817 5179 aa3.66□□□□□ -1.82
NPC1L1-201ENST00000289547 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
NPC1L1-201ENST00000289547 LCE1AQ5T7P2 110 aa3.66□□□□□ -1.82
NPC1L1-201ENST00000289547 KRTAP2-3P0C7H8 128 aa3.64□□□□□ -1.83
NPC1L1-201ENST00000289547 KRTAP2-4Q9BYR9 128 aa3.64□□□□□ -1.83
NPC1L1-201ENST00000289547 KRTAP19-7Q3SYF9 63 aa3.57□□□□□ -1.84
NPC1L1-201ENST00000289547 MT4P47944 62 aa3.55□□□□□ -1.84
NPC1L1-201ENST00000289547 PRM1P04553 51 aa3.53□□□□□ -1.84
NPC1L1-201ENST00000289547 SYNE2Q8WXH0 6885 aaKnown RBP3.53□□□□□ -1.84
NPC1L1-201ENST00000289547 KRTAP2-2Q9BYT5 123 aa3.51□□□□□ -1.85
NPC1L1-201ENST00000289547 KRTAP2-1Q9BYU5 128 aa3.51□□□□□ -1.85
NPC1L1-201ENST00000289547 GPR98Q8WXG9 6306 aa3.49□□□□□ -1.85
NPC1L1-201ENST00000289547 USH2AO75445 5202 aa3.49□□□□□ -1.85
NPC1L1-201ENST00000289547 LOC100996750A0A140TA64 210 aa3.45□□□□□ -1.86
NPC1L1-201ENST00000289547 LCE5AQ5TCM9 118 aa3.42□□□□□ -1.86
NPC1L1-201ENST00000289547 KRTAP4-3Q9BYR4 195 aa3.42□□□□□ -1.86
NPC1L1-201ENST00000289547 LCE4AQ5TA78 99 aa3.42□□□□□ -1.86
NPC1L1-201ENST00000289547 MT3P25713 68 aa3.42□□□□□ -1.86
NPC1L1-201ENST00000289547 KRTAP5-9P26371 169 aa3.39□□□□□ -1.87
NPC1L1-201ENST00000289547 SSPOA2VEC9 5147 aa3.37□□□□□ -1.87
NPC1L1-201ENST00000289547 MT1AP04731 61 aa3.35□□□□□ -1.87
NPC1L1-201ENST00000289547 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
NPC1L1-201ENST00000289547 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
NPC1L1-201ENST00000289547 KRTAP4-9Q9BYQ8 210 aa3.33□□□□□ -1.88
NPC1L1-201ENST00000289547 FCGBPQ9Y6R7 5405 aaPredicted RBP3.28□□□□□ -1.88
NPC1L1-201ENST00000289547 MACF1Q9UPN3 7388 aaKnown RBP3.26□□□□□ -1.89
NPC1L1-201ENST00000289547 NEBP20929 6669 aa3.25□□□□□ -1.89
NPC1L1-201ENST00000289547 KMT2DO14686 5537 aa3.24□□□□□ -1.89
NPC1L1-201ENST00000289547 KRTAP9-4Q9BYQ2 154 aa3.13□□□□□ -1.91
NPC1L1-201ENST00000289547 LCE1DQ5T752 114 aa3.12□□□□□ -1.91
NPC1L1-201ENST00000289547 DSTQ03001 7570 aaKnown RBP3.12□□□□□ -1.91
NPC1L1-201ENST00000289547 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
NPC1L1-201ENST00000289547 KRTAP6-2Q3LI66 62 aa3.1□□□□□ -1.91
NPC1L1-201ENST00000289547 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
NPC1L1-201ENST00000289547 KRTAP9-9Q9BYP9 154 aa2.92□□□□□ -1.94
NPC1L1-201ENST00000289547 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
NPC1L1-201ENST00000289547 MDN1Q9NU22 5596 aa2.88□□□□□ -1.95
NPC1L1-201ENST00000289547 MUC12Q9UKN1 5478 aa2.87□□□□□ -1.95
NPC1L1-201ENST00000289547 KRTAP4-6Q9BYQ5 205 aa2.87□□□□□ -1.95
NPC1L1-201ENST00000289547 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
NPC1L1-201ENST00000289547 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
NPC1L1-201ENST00000289547 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
NPC1L1-201ENST00000289547 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.96
NPC1L1-201ENST00000289547 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
NPC1L1-201ENST00000289547 KRTAP5-5Q701N2 237 aaPredicted RBP2.67□□□□□ -1.98
NPC1L1-201ENST00000289547 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
NPC1L1-201ENST00000289547 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
NPC1L1-201ENST00000289547 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
NPC1L1-201ENST00000289547 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
NPC1L1-201ENST00000289547 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
NPC1L1-201ENST00000289547 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
NPC1L1-201ENST00000289547 KRTAP4-12Q9BQ66 201 aa2.25□□□□□ -2.05
NPC1L1-201ENST00000289547 KRTAP4-2Q9BYR5 136 aa2.25□□□□□ -2.05
NPC1L1-201ENST00000289547 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
NPC1L1-201ENST00000289547 MUC5ACP98088 5654 aa2.19□□□□□ -2.06
NPC1L1-201ENST00000289547 KRTAP5-10Q6L8G5 202 aa2.14□□□□□ -2.07
NPC1L1-201ENST00000289547 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
NPC1L1-201ENST00000289547 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
NPC1L1-201ENST00000289547 KRTAP5-1Q6L8H4 278 aa2.03□□□□□ -2.08
NPC1L1-201ENST00000289547 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
NPC1L1-201ENST00000289547 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
NPC1L1-201ENST00000289547 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
NPC1L1-201ENST00000289547 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.81□□□□□ -2.12
NPC1L1-201ENST00000289547 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
NPC1L1-201ENST00000289547 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
NPC1L1-201ENST00000289547 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 110.1 ms