RNA–Protein interactions for RNA: ENST00000284073.6

MSI2-201, Transcript of musashi RNA binding protein 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MSI2, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-201ENST00000284073 PCLOQ9Y6V0 5065 aa4.62□□□□□ -1.67
MSI2-201ENST00000284073 PKHD1L1Q86WI1 4243 aa4.62□□□□□ -1.67
MSI2-201ENST00000284073 LCE2DQ5TA82 110 aaPredicted RBP4.6□□□□□ -1.67
MSI2-201ENST00000284073 LCE1BQ5T7P3 118 aa4.6□□□□□ -1.67
MSI2-201ENST00000284073 TNXBP22105 4242 aa4.59□□□□□ -1.67
MSI2-201ENST00000284073 KRTAP19-7Q3SYF9 63 aa4.55□□□□□ -1.68
MSI2-201ENST00000284073 LCE1DQ5T752 114 aa4.55□□□□□ -1.68
MSI2-201ENST00000284073 MT4P47944 62 aa4.54□□□□□ -1.68
MSI2-201ENST00000284073 KRTAP9-6A8MVA2 160 aa4.47□□□□□ -1.69
MSI2-201ENST00000284073 EPPK1P58107 5090 aaKnown RBP4.45□□□□□ -1.7
MSI2-201ENST00000284073 MT1AP04731 61 aa4.43□□□□□ -1.7
MSI2-201ENST00000284073 BIRC6Q9NR09 4857 aa4.41□□□□□ -1.7
MSI2-201ENST00000284073 UBR4Q5T4S7 5183 aa4.4□□□□□ -1.7
MSI2-201ENST00000284073 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
MSI2-201ENST00000284073 HMCN2Q8NDA2 5059 aa4.37□□□□□ -1.71
MSI2-201ENST00000284073 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
MSI2-201ENST00000284073 SYNE2Q8WXH0 6885 aaKnown RBP4.36□□□□□ -1.71
MSI2-201ENST00000284073 KRTAP9-7A8MTY7 169 aa4.35□□□□□ -1.71
MSI2-201ENST00000284073 KRTAP19-6Q3LI70 58 aa4.34□□□□□ -1.71
MSI2-201ENST00000284073 ABCA13Q86UQ4 5058 aa4.34□□□□□ -1.71
MSI2-201ENST00000284073 FSIP2Q5CZC0 6907 aa4.33□□□□□ -1.72
MSI2-201ENST00000284073 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
MSI2-201ENST00000284073 MUC2Q02817 5179 aa4.21□□□□□ -1.74
MSI2-201ENST00000284073 LCE5AQ5TCM9 118 aa4.19□□□□□ -1.74
MSI2-201ENST00000284073 FAT4Q6V0I7 4981 aa4.18□□□□□ -1.74
MSI2-201ENST00000284073 KRTAP9-2Q9BYQ4 174 aa4.17□□□□□ -1.74
MSI2-201ENST00000284073 RNF213Q63HN8 5207 aa4.14□□□□□ -1.75
MSI2-201ENST00000284073 KRTAP9-4Q9BYQ2 154 aa4.07□□□□□ -1.76
MSI2-201ENST00000284073 FCGBPQ9Y6R7 5405 aaPredicted RBP4.05□□□□□ -1.76
MSI2-201ENST00000284073 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
MSI2-201ENST00000284073 LCE2AQ5TA79 106 aaPredicted RBP3.96□□□□□ -1.78
MSI2-201ENST00000284073 DSTQ03001 7570 aaKnown RBP3.91□□□□□ -1.78
MSI2-201ENST00000284073 USH2AO75445 5202 aa3.84□□□□□ -1.79
MSI2-201ENST00000284073 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
MSI2-201ENST00000284073 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
MSI2-201ENST00000284073 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
MSI2-201ENST00000284073 LCE1AQ5T7P2 110 aa3.82□□□□□ -1.8
MSI2-201ENST00000284073 KMT2DO14686 5537 aa3.77□□□□□ -1.81
MSI2-201ENST00000284073 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
MSI2-201ENST00000284073 MUC19Q7Z5P9 8384 aa3.69□□□□□ -1.82
MSI2-201ENST00000284073 KRTAP9-6A0A140TA67 174 aa3.69□□□□□ -1.82
MSI2-201ENST00000284073 LCE4AQ5TA78 99 aa3.66□□□□□ -1.82
MSI2-201ENST00000284073 KRTAP6-3Q3LI67 103 aa3.66□□□□□ -1.82
MSI2-201ENST00000284073 KRTAP20-1Q3LI63 56 aa3.59□□□□□ -1.84
MSI2-201ENST00000284073 MACF1Q9UPN3 7388 aaKnown RBP3.58□□□□□ -1.84
MSI2-201ENST00000284073 SSPOA2VEC9 5147 aa3.53□□□□□ -1.85
MSI2-201ENST00000284073 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
MSI2-201ENST00000284073 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.38□□□□□ -1.87
MSI2-201ENST00000284073 MUC12Q9UKN1 5478 aa3.35□□□□□ -1.87
MSI2-201ENST00000284073 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
MSI2-201ENST00000284073 KRTAP4-6Q9BYQ5 205 aa3.3□□□□□ -1.88
MSI2-201ENST00000284073 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
MSI2-201ENST00000284073 KRTAP9-9Q9BYP9 154 aa3.2□□□□□ -1.9
MSI2-201ENST00000284073 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
MSI2-201ENST00000284073 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
MSI2-201ENST00000284073 MDN1Q9NU22 5596 aa3.07□□□□□ -1.92
MSI2-201ENST00000284073 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
MSI2-201ENST00000284073 NEBP20929 6669 aa3.04□□□□□ -1.92
MSI2-201ENST00000284073 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
MSI2-201ENST00000284073 KRTAP5-4Q6L8H1 288 aa2.76□□□□□ -1.97
MSI2-201ENST00000284073 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
MSI2-201ENST00000284073 HMCN1Q96RW7 5635 aa2.6□□□□□ -1.99
MSI2-201ENST00000284073 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
MSI2-201ENST00000284073 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
MSI2-201ENST00000284073 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
MSI2-201ENST00000284073 AHNAK2Q8IVF2 5795 aa2.25□□□□□ -2.05
MSI2-201ENST00000284073 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
MSI2-201ENST00000284073 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
MSI2-201ENST00000284073 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
MSI2-201ENST00000284073 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
MSI2-201ENST00000284073 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.08
MSI2-201ENST00000284073 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
MSI2-201ENST00000284073 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
MSI2-201ENST00000284073 AHNAKQ09666 5890 aaKnown RBP1.96□□□□□ -2.1
MSI2-201ENST00000284073 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
MSI2-201ENST00000284073 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
MSI2-201ENST00000284073 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 10.6 ms