RNA–Protein interactions for RNA: ENST00000282641.6

A1CF-201, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene A1CF, Length 9,350 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-201ENST00000282641 KRTAP19-6Q3LI70 58 aa2.4□□□□□ -2.03
A1CF-201ENST00000282641 KRTAP4-5Q9BYR2 181 aa2.4□□□□□ -2.03
A1CF-201ENST00000282641 KRTAP9-6A8MVA2 160 aa2.39□□□□□ -2.03
A1CF-201ENST00000282641 EPPK1P58107 5090 aaKnown RBP2.36□□□□□ -2.03
A1CF-201ENST00000282641 RNF213Q63HN8 5207 aa2.35□□□□□ -2.03
A1CF-201ENST00000282641 LCE1AQ5T7P2 110 aa2.35□□□□□ -2.03
A1CF-201ENST00000282641 MUC12Q9UKN1 5478 aa2.34□□□□□ -2.03
A1CF-201ENST00000282641 KRTAP9-2Q9BYQ4 174 aa2.34□□□□□ -2.03
A1CF-201ENST00000282641 LCE2BO14633 110 aa2.29□□□□□ -2.04
A1CF-201ENST00000282641 KRTAP6-2Q3LI66 62 aa2.28□□□□□ -2.04
A1CF-201ENST00000282641 LCE5AQ5TCM9 118 aa2.28□□□□□ -2.04
A1CF-201ENST00000282641 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
A1CF-201ENST00000282641 FAT4Q6V0I7 4981 aa2.21□□□□□ -2.06
A1CF-201ENST00000282641 KRTAP9-4Q9BYQ2 154 aa2.19□□□□□ -2.06
A1CF-201ENST00000282641 LPAP08519 4548 aa2.19□□□□□ -2.06
A1CF-201ENST00000282641 KRTAP6-3Q3LI67 103 aa2.19□□□□□ -2.06
A1CF-201ENST00000282641 KRTAP4-8A0A0G2JLE6 195 aa2.16□□□□□ -2.06
A1CF-201ENST00000282641 KRTAP4-8Q9BYQ9 185 aa2.16□□□□□ -2.06
A1CF-201ENST00000282641 KRTAP17-1Q9BYP8 105 aa2.13□□□□□ -2.07
A1CF-201ENST00000282641 KRTAP4-7Q9BYR0 210 aa2.11□□□□□ -2.07
A1CF-201ENST00000282641 MDN1Q9NU22 5596 aa2.09□□□□□ -2.07
A1CF-201ENST00000282641 KRTAP9-7A8MTY7 169 aa2.09□□□□□ -2.08
A1CF-201ENST00000282641 KRTAP6-1Q3LI64 71 aa2.08□□□□□ -2.08
A1CF-201ENST00000282641 LCE2DQ5TA82 110 aaPredicted RBP2.06□□□□□ -2.08
A1CF-201ENST00000282641 KRTAP5-5Q701N2 237 aaPredicted RBP2.03□□□□□ -2.08
A1CF-201ENST00000282641 LCE4AQ5TA78 99 aa2.03□□□□□ -2.09
A1CF-201ENST00000282641 SYNE1Q8NF91 8797 aaKnown RBP2.02□□□□□ -2.09
A1CF-201ENST00000282641 LCE2AQ5TA79 106 aaPredicted RBP2.01□□□□□ -2.09
A1CF-201ENST00000282641 LOC100996750A0A140TA64 210 aa1.98□□□□□ -2.09
A1CF-201ENST00000282641 USH2AO75445 5202 aa1.96□□□□□ -2.1
A1CF-201ENST00000282641 LCE1EQ5T753 118 aa1.94□□□□□ -2.1
A1CF-201ENST00000282641 KRTAP5-9P26371 169 aa1.89□□□□□ -2.11
A1CF-201ENST00000282641 KMT2DO14686 5537 aa1.87□□□□□ -2.11
A1CF-201ENST00000282641 KRTAP4-9Q9BYQ8 210 aa1.84□□□□□ -2.12
A1CF-201ENST00000282641 KRTAP4-3Q9BYR4 195 aa1.83□□□□□ -2.12
A1CF-201ENST00000282641 MUC2Q02817 5179 aa1.83□□□□□ -2.12
A1CF-201ENST00000282641 FCGBPQ9Y6R7 5405 aaPredicted RBP1.82□□□□□ -2.12
A1CF-201ENST00000282641 SSPOA2VEC9 5147 aa1.81□□□□□ -2.12
A1CF-201ENST00000282641 LCE1DQ5T752 114 aa1.8□□□□□ -2.12
A1CF-201ENST00000282641 SYNE2Q8WXH0 6885 aaKnown RBP1.78□□□□□ -2.12
A1CF-201ENST00000282641 NEBP20929 6669 aa1.76□□□□□ -2.13
A1CF-201ENST00000282641 AHNAK2Q8IVF2 5795 aa1.75□□□□□ -2.13
A1CF-201ENST00000282641 MACF1Q9UPN3 7388 aaKnown RBP1.75□□□□□ -2.13
A1CF-201ENST00000282641 KRTAP4-6Q9BYQ5 205 aa1.74□□□□□ -2.13
A1CF-201ENST00000282641 KRTAP20-1Q3LI63 56 aa1.74□□□□□ -2.13
A1CF-201ENST00000282641 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
A1CF-201ENST00000282641 LCE1BQ5T7P3 118 aa1.7□□□□□ -2.14
A1CF-201ENST00000282641 MUC5BQ9HC84 5762 aaPredicted RBP1.69□□□□□ -2.14
A1CF-201ENST00000282641 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
A1CF-201ENST00000282641 FSIP2Q5CZC0 6907 aa1.66□□□□□ -2.14
A1CF-201ENST00000282641 KRTAP5-4Q6L8H1 288 aa1.66□□□□□ -2.14
A1CF-201ENST00000282641 LCE1FQ5T754 118 aa1.64□□□□□ -2.15
A1CF-201ENST00000282641 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
A1CF-201ENST00000282641 KRTAP5-10Q6L8G5 202 aa1.63□□□□□ -2.15
A1CF-201ENST00000282641 KRTAP9-9Q9BYP9 154 aa1.59□□□□□ -2.15
A1CF-201ENST00000282641 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.59□□□□□ -2.16
A1CF-201ENST00000282641 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
A1CF-201ENST00000282641 KRTAP4-11Q9BYQ6 195 aa1.58□□□□□ -2.16
A1CF-201ENST00000282641 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
A1CF-201ENST00000282641 KRTAP5-2Q701N4 177 aa1.56□□□□□ -2.16
A1CF-201ENST00000282641 MUC5ACP98088 5654 aa1.55□□□□□ -2.16
A1CF-201ENST00000282641 KRTAP5-1Q6L8H4 278 aa1.52□□□□□ -2.17
A1CF-201ENST00000282641 MT4P47944 62 aa1.51□□□□□ -2.17
A1CF-201ENST00000282641 DSTQ03001 7570 aaKnown RBP1.49□□□□□ -2.17
A1CF-201ENST00000282641 KRTAP5-3Q6L8H2 238 aa1.46□□□□□ -2.17
A1CF-201ENST00000282641 KRTAP5-11Q6L8G4 156 aa1.44□□□□□ -2.18
A1CF-201ENST00000282641 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.43□□□□□ -2.18
A1CF-201ENST00000282641 KRTAP4-12Q9BQ66 201 aa1.42□□□□□ -2.18
A1CF-201ENST00000282641 KRTAP5-8O75690 187 aa1.41□□□□□ -2.18
A1CF-201ENST00000282641 KRTAP4-4Q9BYR3 166 aa1.34□□□□□ -2.19
A1CF-201ENST00000282641 OBSCNQ5VST9 7968 aa1.34□□□□□ -2.2
A1CF-201ENST00000282641 KRTAP4-2Q9BYR5 136 aa1.33□□□□□ -2.2
A1CF-201ENST00000282641 KRTAP5-7Q6L8G8 165 aa1.29□□□□□ -2.2
A1CF-201ENST00000282641 KRTAP21-2Q3LI59 83 aa1.28□□□□□ -2.2
A1CF-201ENST00000282641 MUC19Q7Z5P9 8384 aa1.15□□□□□ -2.23
A1CF-201ENST00000282641 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
A1CF-201ENST00000282641 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms