RNA–Protein interactions for RNA: ENST00000271636.11

CGN-201, Transcript of cingulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGN, Length 5,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGN-201ENST00000271636 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
CGN-201ENST00000271636 KRTAP19-7Q3SYF9 63 aa4.94□□□□□ -1.62
CGN-201ENST00000271636 KRTAP9-2Q9BYQ4 174 aa4.87□□□□□ -1.63
CGN-201ENST00000271636 MT1MQ8N339 61 aa4.86□□□□□ -1.63
CGN-201ENST00000271636 KRTAP4-7Q9BYR0 210 aa4.84□□□□□ -1.63
CGN-201ENST00000271636 LCE3DQ9BYE3 92 aa4.76□□□□□ -1.65
CGN-201ENST00000271636 LCE3EQ5T5B0 92 aa4.7□□□□□ -1.66
CGN-201ENST00000271636 USH2AO75445 5202 aa4.64□□□□□ -1.67
CGN-201ENST00000271636 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.68
CGN-201ENST00000271636 KRTAP2-3P0C7H8 128 aa4.58□□□□□ -1.68
CGN-201ENST00000271636 KRTAP2-4Q9BYR9 128 aa4.58□□□□□ -1.68
CGN-201ENST00000271636 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
CGN-201ENST00000271636 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
CGN-201ENST00000271636 LOC100996750A0A140TA64 210 aa4.55□□□□□ -1.68
CGN-201ENST00000271636 KRTAP9-6A0A140TA67 174 aa4.54□□□□□ -1.68
CGN-201ENST00000271636 FSIP2Q5CZC0 6907 aa4.54□□□□□ -1.68
CGN-201ENST00000271636 LCE5AQ5TCM9 118 aa4.54□□□□□ -1.68
CGN-201ENST00000271636 MT3P25713 68 aa4.52□□□□□ -1.69
CGN-201ENST00000271636 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
CGN-201ENST00000271636 MT1AP04731 61 aa4.49□□□□□ -1.69
CGN-201ENST00000271636 KRTAP6-3Q3LI67 103 aa4.48□□□□□ -1.69
CGN-201ENST00000271636 SYNE1Q8NF91 8797 aaKnown RBP4.45□□□□□ -1.7
CGN-201ENST00000271636 MT4P47944 62 aa4.37□□□□□ -1.71
CGN-201ENST00000271636 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.33□□□□□ -1.72
CGN-201ENST00000271636 PRM1P04553 51 aa4.33□□□□□ -1.72
CGN-201ENST00000271636 SSPOA2VEC9 5147 aa4.29□□□□□ -1.72
CGN-201ENST00000271636 KRTAP5-9P26371 169 aa4.28□□□□□ -1.72
CGN-201ENST00000271636 LCE1BQ5T7P3 118 aa4.22□□□□□ -1.73
CGN-201ENST00000271636 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
CGN-201ENST00000271636 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
CGN-201ENST00000271636 FCGBPQ9Y6R7 5405 aaPredicted RBP4.21□□□□□ -1.74
CGN-201ENST00000271636 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
CGN-201ENST00000271636 KMT2DO14686 5537 aa4.19□□□□□ -1.74
CGN-201ENST00000271636 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
CGN-201ENST00000271636 KRTAP20-1Q3LI63 56 aa4.14□□□□□ -1.75
CGN-201ENST00000271636 LCE4AQ5TA78 99 aa4.11□□□□□ -1.75
CGN-201ENST00000271636 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
CGN-201ENST00000271636 MACF1Q9UPN3 7388 aaKnown RBP4.08□□□□□ -1.76
CGN-201ENST00000271636 SYNE2Q8WXH0 6885 aaKnown RBP4.06□□□□□ -1.76
CGN-201ENST00000271636 KRTAP6-2Q3LI66 62 aa4□□□□□ -1.77
CGN-201ENST00000271636 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
CGN-201ENST00000271636 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
CGN-201ENST00000271636 MUC12Q9UKN1 5478 aa3.92□□□□□ -1.78
CGN-201ENST00000271636 DSTQ03001 7570 aaKnown RBP3.8□□□□□ -1.8
CGN-201ENST00000271636 NEBP20929 6669 aa3.78□□□□□ -1.8
CGN-201ENST00000271636 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
CGN-201ENST00000271636 MDN1Q9NU22 5596 aa3.67□□□□□ -1.82
CGN-201ENST00000271636 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
CGN-201ENST00000271636 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
CGN-201ENST00000271636 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
CGN-201ENST00000271636 KRTAP20-2Q3LI61 65 aa3.62□□□□□ -1.83
CGN-201ENST00000271636 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
CGN-201ENST00000271636 KRTAP4-6Q9BYQ5 205 aa3.57□□□□□ -1.84
CGN-201ENST00000271636 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
CGN-201ENST00000271636 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
CGN-201ENST00000271636 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
CGN-201ENST00000271636 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
CGN-201ENST00000271636 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
CGN-201ENST00000271636 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.92
CGN-201ENST00000271636 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
CGN-201ENST00000271636 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
CGN-201ENST00000271636 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
CGN-201ENST00000271636 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
CGN-201ENST00000271636 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
CGN-201ENST00000271636 KRTAP5-10Q6L8G5 202 aa2.74□□□□□ -1.97
CGN-201ENST00000271636 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
CGN-201ENST00000271636 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
CGN-201ENST00000271636 KRTAP5-1Q6L8H4 278 aa2.69□□□□□ -1.98
CGN-201ENST00000271636 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.58□□□□□ -2
CGN-201ENST00000271636 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
CGN-201ENST00000271636 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
CGN-201ENST00000271636 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
CGN-201ENST00000271636 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
CGN-201ENST00000271636 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
CGN-201ENST00000271636 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
CGN-201ENST00000271636 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
CGN-201ENST00000271636 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 32.4 ms