RNA–Protein interactions for RNA: ENST00000269033.7

SSH2-201, Transcript of slingshot protein phosphatase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH2, Length 9,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-201ENST00000269033 LCE1BQ5T7P3 118 aa1.83□□□□□ -2.12
SSH2-201ENST00000269033 EPPK1P58107 5090 aaKnown RBP1.83□□□□□ -2.12
SSH2-201ENST00000269033 HERC2O95714 4834 aa1.82□□□□□ -2.12
SSH2-201ENST00000269033 KRTAP4-8A0A0G2JLE6 195 aa1.82□□□□□ -2.12
SSH2-201ENST00000269033 KRTAP4-8Q9BYQ9 185 aa1.82□□□□□ -2.12
SSH2-201ENST00000269033 LRP2P98164 4655 aa1.81□□□□□ -2.12
SSH2-201ENST00000269033 LCE1AQ5T7P2 110 aa1.81□□□□□ -2.12
SSH2-201ENST00000269033 PRM1P04553 51 aa1.78□□□□□ -2.13
SSH2-201ENST00000269033 MT1AP04731 61 aa1.78□□□□□ -2.13
SSH2-201ENST00000269033 LCE4AQ5TA78 99 aa1.78□□□□□ -2.13
SSH2-201ENST00000269033 KRTAP2-3P0C7H8 128 aa1.77□□□□□ -2.13
SSH2-201ENST00000269033 KRTAP2-4Q9BYR9 128 aa1.77□□□□□ -2.13
SSH2-201ENST00000269033 LCE5AQ5TCM9 118 aa1.77□□□□□ -2.13
SSH2-201ENST00000269033 HERC1Q15751 4861 aa1.76□□□□□ -2.13
SSH2-201ENST00000269033 MUC2Q02817 5179 aa1.75□□□□□ -2.13
SSH2-201ENST00000269033 KRTAP19-2Q3LHN2 52 aa1.75□□□□□ -2.13
SSH2-201ENST00000269033 KRTAP6-3Q3LI67 103 aa1.73□□□□□ -2.13
SSH2-201ENST00000269033 KRTAP9-7A8MTY7 169 aa1.71□□□□□ -2.14
SSH2-201ENST00000269033 HMCN2Q8NDA2 5059 aa1.7□□□□□ -2.14
SSH2-201ENST00000269033 KRTAP2-1Q9BYU5 128 aa1.69□□□□□ -2.14
SSH2-201ENST00000269033 KRTAP2-2Q9BYT5 123 aa1.68□□□□□ -2.14
SSH2-201ENST00000269033 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
SSH2-201ENST00000269033 LCE1EQ5T753 118 aa1.67□□□□□ -2.14
SSH2-201ENST00000269033 LCE1FQ5T754 118 aa1.67□□□□□ -2.14
SSH2-201ENST00000269033 KRTAP4-7Q9BYR0 210 aa1.64□□□□□ -2.15
SSH2-201ENST00000269033 KRTAP9-9Q9BYP9 154 aa1.63□□□□□ -2.15
SSH2-201ENST00000269033 FSIP2Q5CZC0 6907 aa1.61□□□□□ -2.15
SSH2-201ENST00000269033 KRTAP9-4Q9BYQ2 154 aa1.6□□□□□ -2.15
SSH2-201ENST00000269033 FAT4Q6V0I7 4981 aa1.6□□□□□ -2.15
SSH2-201ENST00000269033 KRTAP19-7Q3SYF9 63 aa1.59□□□□□ -2.16
SSH2-201ENST00000269033 LOC100996750A0A140TA64 210 aa1.58□□□□□ -2.16
SSH2-201ENST00000269033 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.58□□□□□ -2.16
SSH2-201ENST00000269033 SYNE1Q8NF91 8797 aaKnown RBP1.57□□□□□ -2.16
SSH2-201ENST00000269033 KRTAP6-2Q3LI66 62 aa1.57□□□□□ -2.16
SSH2-201ENST00000269033 USH2AO75445 5202 aa1.57□□□□□ -2.16
SSH2-201ENST00000269033 KRTAP4-3Q9BYR4 195 aa1.56□□□□□ -2.16
SSH2-201ENST00000269033 KRTAP4-9Q9BYQ8 210 aa1.54□□□□□ -2.16
SSH2-201ENST00000269033 SYNE2Q8WXH0 6885 aaKnown RBP1.51□□□□□ -2.17
SSH2-201ENST00000269033 KRTAP6-1Q3LI64 71 aa1.5□□□□□ -2.17
SSH2-201ENST00000269033 KRTAP4-6Q9BYQ5 205 aa1.45□□□□□ -2.18
SSH2-201ENST00000269033 KMT2DO14686 5537 aa1.45□□□□□ -2.18
SSH2-201ENST00000269033 SSPOA2VEC9 5147 aa1.44□□□□□ -2.18
SSH2-201ENST00000269033 FCGBPQ9Y6R7 5405 aaPredicted RBP1.43□□□□□ -2.18
SSH2-201ENST00000269033 KRTAP4-12Q9BQ66 201 aa1.4□□□□□ -2.19
SSH2-201ENST00000269033 MUC12Q9UKN1 5478 aa1.37□□□□□ -2.19
SSH2-201ENST00000269033 KRTAP9-6A8MVA2 160 aa1.35□□□□□ -2.19
SSH2-201ENST00000269033 KRTAP5-9P26371 169 aa1.35□□□□□ -2.19
SSH2-201ENST00000269033 KRTAP4-11Q9BYQ6 195 aa1.35□□□□□ -2.19
SSH2-201ENST00000269033 MDN1Q9NU22 5596 aa1.34□□□□□ -2.2
SSH2-201ENST00000269033 NEBP20929 6669 aa1.34□□□□□ -2.2
SSH2-201ENST00000269033 DSTQ03001 7570 aaKnown RBP1.33□□□□□ -2.2
SSH2-201ENST00000269033 OBSCNQ5VST9 7968 aa1.31□□□□□ -2.2
SSH2-201ENST00000269033 GPR98Q8WXG9 6306 aa1.3□□□□□ -2.2
SSH2-201ENST00000269033 KRTAP20-2Q3LI61 65 aa1.29□□□□□ -2.2
SSH2-201ENST00000269033 KRTAP5-4Q6L8H1 288 aa1.28□□□□□ -2.21
SSH2-201ENST00000269033 MACF1Q9UPN3 7388 aaKnown RBP1.23□□□□□ -2.21
SSH2-201ENST00000269033 KRTAP4-2Q9BYR5 136 aa1.22□□□□□ -2.21
SSH2-201ENST00000269033 MUC5BQ9HC84 5762 aaPredicted RBP1.17□□□□□ -2.22
SSH2-201ENST00000269033 KRTAP5-5Q701N2 237 aaPredicted RBP1.14□□□□□ -2.23
SSH2-201ENST00000269033 KRTAP5-3Q6L8H2 238 aa1.12□□□□□ -2.23
SSH2-201ENST00000269033 MUC5ACP98088 5654 aa1.11□□□□□ -2.23
SSH2-201ENST00000269033 KRTAP4-4Q9BYR3 166 aa1.1□□□□□ -2.23
SSH2-201ENST00000269033 MUC19Q7Z5P9 8384 aa1.09□□□□□ -2.23
SSH2-201ENST00000269033 AHNAK2Q8IVF2 5795 aa1.04□□□□□ -2.24
SSH2-201ENST00000269033 HMCN1Q96RW7 5635 aa1.04□□□□□ -2.24
SSH2-201ENST00000269033 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
SSH2-201ENST00000269033 KRTAP5-2Q701N4 177 aa0.97□□□□□ -2.25
SSH2-201ENST00000269033 KRTAP5-8O75690 187 aa0.94□□□□□ -2.26
SSH2-201ENST00000269033 KRTAP5-7Q6L8G8 165 aa0.94□□□□□ -2.26
SSH2-201ENST00000269033 KRTAP5-1Q6L8H4 278 aa0.92□□□□□ -2.26
SSH2-201ENST00000269033 AHNAKQ09666 5890 aaKnown RBP0.92□□□□□ -2.26
SSH2-201ENST00000269033 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.9□□□□□ -2.26
SSH2-201ENST00000269033 KRTAP5-10Q6L8G5 202 aa0.89□□□□□ -2.27
SSH2-201ENST00000269033 KRTAP5-11Q6L8G4 156 aa0.89□□□□□ -2.27
SSH2-201ENST00000269033 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
SSH2-201ENST00000269033 KRTAP21-2Q3LI59 83 aa0.77□□□□□ -2.29
SSH2-201ENST00000269033 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 84.5 ms