RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 MT1EP04732 61 aa4.81□□□□□ -1.64
PDPK1-201ENST00000268673 KRTAP19-3Q7Z4W3 81 aa4.79□□□□□ -1.64
PDPK1-201ENST00000268673 KRTAP2-3P0C7H8 128 aa4.77□□□□□ -1.65
PDPK1-201ENST00000268673 KRTAP2-4Q9BYR9 128 aa4.77□□□□□ -1.65
PDPK1-201ENST00000268673 KRTAP2-1Q9BYU5 128 aa4.77□□□□□ -1.65
PDPK1-201ENST00000268673 LCE3DQ9BYE3 92 aa4.72□□□□□ -1.65
PDPK1-201ENST00000268673 LCE3EQ5T5B0 92 aa4.69□□□□□ -1.66
PDPK1-201ENST00000268673 KRTAP19-7Q3SYF9 63 aa4.67□□□□□ -1.66
PDPK1-201ENST00000268673 KRTAP19-6Q3LI70 58 aa4.67□□□□□ -1.66
PDPK1-201ENST00000268673 LCE2AQ5TA79 106 aaPredicted RBP4.64□□□□□ -1.67
PDPK1-201ENST00000268673 KRTAP9-2Q9BYQ4 174 aa4.6□□□□□ -1.67
PDPK1-201ENST00000268673 KRTAP9-6A8MVA2 160 aa4.59□□□□□ -1.67
PDPK1-201ENST00000268673 MT1MQ8N339 61 aa4.58□□□□□ -1.68
PDPK1-201ENST00000268673 LOC100996750A0A140TA64 210 aa4.55□□□□□ -1.68
PDPK1-201ENST00000268673 KMT2DO14686 5537 aa4.51□□□□□ -1.69
PDPK1-201ENST00000268673 KRTAP4-3Q9BYR4 195 aa4.48□□□□□ -1.69
PDPK1-201ENST00000268673 USH2AO75445 5202 aa4.47□□□□□ -1.69
PDPK1-201ENST00000268673 KRTAP9-6A0A140TA67 174 aa4.45□□□□□ -1.7
PDPK1-201ENST00000268673 PRM1P04553 51 aa4.44□□□□□ -1.7
PDPK1-201ENST00000268673 MT3P25713 68 aa4.39□□□□□ -1.71
PDPK1-201ENST00000268673 MT4P47944 62 aa4.36□□□□□ -1.71
PDPK1-201ENST00000268673 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
PDPK1-201ENST00000268673 MT1AP04731 61 aa4.26□□□□□ -1.73
PDPK1-201ENST00000268673 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
PDPK1-201ENST00000268673 SYNE2Q8WXH0 6885 aaKnown RBP4.22□□□□□ -1.73
PDPK1-201ENST00000268673 KRTAP9-7A8MTY7 169 aa4.16□□□□□ -1.74
PDPK1-201ENST00000268673 FCGBPQ9Y6R7 5405 aaPredicted RBP4.15□□□□□ -1.74
PDPK1-201ENST00000268673 LCE1DQ5T752 114 aa4.13□□□□□ -1.75
PDPK1-201ENST00000268673 LCE1AQ5T7P2 110 aa4.13□□□□□ -1.75
PDPK1-201ENST00000268673 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
PDPK1-201ENST00000268673 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.76
PDPK1-201ENST00000268673 DSTQ03001 7570 aaKnown RBP4.08□□□□□ -1.76
PDPK1-201ENST00000268673 LCE5AQ5TCM9 118 aa4.07□□□□□ -1.76
PDPK1-201ENST00000268673 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
PDPK1-201ENST00000268673 KRTAP20-1Q3LI63 56 aa4.04□□□□□ -1.76
PDPK1-201ENST00000268673 KRTAP6-2Q3LI66 62 aa4.01□□□□□ -1.77
PDPK1-201ENST00000268673 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
PDPK1-201ENST00000268673 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.98□□□□□ -1.77
PDPK1-201ENST00000268673 MACF1Q9UPN3 7388 aaKnown RBP3.94□□□□□ -1.78
PDPK1-201ENST00000268673 MUC12Q9UKN1 5478 aa3.94□□□□□ -1.78
PDPK1-201ENST00000268673 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
PDPK1-201ENST00000268673 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
PDPK1-201ENST00000268673 KRTAP2-2Q9BYT5 123 aa3.82□□□□□ -1.8
PDPK1-201ENST00000268673 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
PDPK1-201ENST00000268673 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
PDPK1-201ENST00000268673 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
PDPK1-201ENST00000268673 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
PDPK1-201ENST00000268673 KRTAP5-5Q701N2 237 aaPredicted RBP3.56□□□□□ -1.84
PDPK1-201ENST00000268673 NEBP20929 6669 aa3.56□□□□□ -1.84
PDPK1-201ENST00000268673 GPR98Q8WXG9 6306 aa3.54□□□□□ -1.84
PDPK1-201ENST00000268673 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
PDPK1-201ENST00000268673 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
PDPK1-201ENST00000268673 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
PDPK1-201ENST00000268673 KRTAP20-2Q3LI61 65 aa3.31□□□□□ -1.88
PDPK1-201ENST00000268673 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
PDPK1-201ENST00000268673 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
PDPK1-201ENST00000268673 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.92
PDPK1-201ENST00000268673 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
PDPK1-201ENST00000268673 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
PDPK1-201ENST00000268673 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
PDPK1-201ENST00000268673 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
PDPK1-201ENST00000268673 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
PDPK1-201ENST00000268673 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
PDPK1-201ENST00000268673 AHNAK2Q8IVF2 5795 aa2.78□□□□□ -1.96
PDPK1-201ENST00000268673 KRTAP5-3Q6L8H2 238 aa2.74□□□□□ -1.97
PDPK1-201ENST00000268673 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
PDPK1-201ENST00000268673 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
PDPK1-201ENST00000268673 KRTAP5-1Q6L8H4 278 aa2.43□□□□□ -2.02
PDPK1-201ENST00000268673 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
PDPK1-201ENST00000268673 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
PDPK1-201ENST00000268673 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
PDPK1-201ENST00000268673 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
PDPK1-201ENST00000268673 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
PDPK1-201ENST00000268673 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
PDPK1-201ENST00000268673 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
PDPK1-201ENST00000268673 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
PDPK1-201ENST00000268673 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 136.5 ms