RNA–Protein interactions for RNA: ENST00000267101.7

ERBB3-201, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB3, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-201ENST00000267101 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
ERBB3-201ENST00000267101 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
ERBB3-201ENST00000267101 KRTAP9-6A0A140TA67 174 aa3.65□□□□□ -1.82
ERBB3-201ENST00000267101 MT3P25713 68 aa3.64□□□□□ -1.83
ERBB3-201ENST00000267101 KRTAP4-7Q9BYR0 210 aa3.64□□□□□ -1.83
ERBB3-201ENST00000267101 MUC2Q02817 5179 aa3.62□□□□□ -1.83
ERBB3-201ENST00000267101 MT1MQ8N339 61 aa3.6□□□□□ -1.83
ERBB3-201ENST00000267101 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
ERBB3-201ENST00000267101 FSIP2Q5CZC0 6907 aa3.57□□□□□ -1.84
ERBB3-201ENST00000267101 KRTAP19-7Q3SYF9 63 aa3.56□□□□□ -1.84
ERBB3-201ENST00000267101 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
ERBB3-201ENST00000267101 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
ERBB3-201ENST00000267101 LOC100996750A0A140TA64 210 aa3.46□□□□□ -1.86
ERBB3-201ENST00000267101 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
ERBB3-201ENST00000267101 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.4□□□□□ -1.87
ERBB3-201ENST00000267101 KRTAP9-7A8MTY7 169 aa3.38□□□□□ -1.87
ERBB3-201ENST00000267101 MT4P47944 62 aa3.35□□□□□ -1.87
ERBB3-201ENST00000267101 LCE1AQ5T7P2 110 aa3.34□□□□□ -1.87
ERBB3-201ENST00000267101 LCE5AQ5TCM9 118 aa3.31□□□□□ -1.88
ERBB3-201ENST00000267101 KRTAP20-1Q3LI63 56 aa3.29□□□□□ -1.88
ERBB3-201ENST00000267101 MT1AP04731 61 aa3.28□□□□□ -1.88
ERBB3-201ENST00000267101 USH2AO75445 5202 aa3.27□□□□□ -1.89
ERBB3-201ENST00000267101 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
ERBB3-201ENST00000267101 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
ERBB3-201ENST00000267101 KRTAP2-1Q9BYU5 128 aa3.25□□□□□ -1.89
ERBB3-201ENST00000267101 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
ERBB3-201ENST00000267101 PRM1P04553 51 aa3.21□□□□□ -1.9
ERBB3-201ENST00000267101 SYNE2Q8WXH0 6885 aaKnown RBP3.2□□□□□ -1.9
ERBB3-201ENST00000267101 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
ERBB3-201ENST00000267101 KRTAP4-9Q9BYQ8 210 aa3.15□□□□□ -1.91
ERBB3-201ENST00000267101 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
ERBB3-201ENST00000267101 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
ERBB3-201ENST00000267101 FCGBPQ9Y6R7 5405 aaPredicted RBP3.13□□□□□ -1.91
ERBB3-201ENST00000267101 LCE4AQ5TA78 99 aa3.13□□□□□ -1.91
ERBB3-201ENST00000267101 LCE1DQ5T752 114 aa3.11□□□□□ -1.91
ERBB3-201ENST00000267101 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
ERBB3-201ENST00000267101 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
ERBB3-201ENST00000267101 KRTAP9-4Q9BYQ2 154 aa3.1□□□□□ -1.91
ERBB3-201ENST00000267101 SSPOA2VEC9 5147 aa3.09□□□□□ -1.91
ERBB3-201ENST00000267101 KMT2DO14686 5537 aa3.03□□□□□ -1.92
ERBB3-201ENST00000267101 MACF1Q9UPN3 7388 aaKnown RBP3.03□□□□□ -1.92
ERBB3-201ENST00000267101 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
ERBB3-201ENST00000267101 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
ERBB3-201ENST00000267101 NEBP20929 6669 aa2.94□□□□□ -1.94
ERBB3-201ENST00000267101 MUC12Q9UKN1 5478 aa2.8□□□□□ -1.96
ERBB3-201ENST00000267101 KRTAP4-6Q9BYQ5 205 aa2.75□□□□□ -1.97
ERBB3-201ENST00000267101 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
ERBB3-201ENST00000267101 MDN1Q9NU22 5596 aa2.72□□□□□ -1.97
ERBB3-201ENST00000267101 KRTAP5-5Q701N2 237 aaPredicted RBP2.66□□□□□ -1.98
ERBB3-201ENST00000267101 KRTAP5-4Q6L8H1 288 aa2.65□□□□□ -1.99
ERBB3-201ENST00000267101 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
ERBB3-201ENST00000267101 LCE1EQ5T753 118 aa2.65□□□□□ -1.99
ERBB3-201ENST00000267101 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
ERBB3-201ENST00000267101 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
ERBB3-201ENST00000267101 GPR98Q8WXG9 6306 aa2.61□□□□□ -1.99
ERBB3-201ENST00000267101 KRTAP9-9Q9BYP9 154 aa2.54□□□□□ -2
ERBB3-201ENST00000267101 KRTAP4-11Q9BYQ6 195 aa2.4□□□□□ -2.03
ERBB3-201ENST00000267101 KRTAP5-3Q6L8H2 238 aa2.27□□□□□ -2.05
ERBB3-201ENST00000267101 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
ERBB3-201ENST00000267101 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
ERBB3-201ENST00000267101 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
ERBB3-201ENST00000267101 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
ERBB3-201ENST00000267101 HMCN1Q96RW7 5635 aa2.19□□□□□ -2.06
ERBB3-201ENST00000267101 KRTAP4-2Q9BYR5 136 aa2.18□□□□□ -2.06
ERBB3-201ENST00000267101 AHNAK2Q8IVF2 5795 aa2.09□□□□□ -2.07
ERBB3-201ENST00000267101 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
ERBB3-201ENST00000267101 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
ERBB3-201ENST00000267101 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
ERBB3-201ENST00000267101 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
ERBB3-201ENST00000267101 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
ERBB3-201ENST00000267101 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
ERBB3-201ENST00000267101 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
ERBB3-201ENST00000267101 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
ERBB3-201ENST00000267101 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
ERBB3-201ENST00000267101 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
ERBB3-201ENST00000267101 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
ERBB3-201ENST00000267101 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 37.1 ms