RNA–Protein interactions for RNA: ENST00000265724.7

ABCB1-201, Transcript of ATP binding cassette subfamily B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB1, Length 4,645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-201ENST00000265724 SPRR2DP22532 72 aa3.27□□□□□ -1.89
ABCB1-201ENST00000265724 SYNE1Q8NF91 8797 aaKnown RBP3.24□□□□□ -1.89
ABCB1-201ENST00000265724 KRTAP9-2Q9BYQ4 174 aa3.21□□□□□ -1.9
ABCB1-201ENST00000265724 KRTAP19-7Q3SYF9 63 aa3.18□□□□□ -1.9
ABCB1-201ENST00000265724 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
ABCB1-201ENST00000265724 MT1MQ8N339 61 aa3.17□□□□□ -1.9
ABCB1-201ENST00000265724 LCE2DQ5TA82 110 aaPredicted RBP3.16□□□□□ -1.9
ABCB1-201ENST00000265724 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
ABCB1-201ENST00000265724 LOC100996750A0A140TA64 210 aa3.11□□□□□ -1.91
ABCB1-201ENST00000265724 USH2AO75445 5202 aa3.1□□□□□ -1.91
ABCB1-201ENST00000265724 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
ABCB1-201ENST00000265724 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
ABCB1-201ENST00000265724 SSPOA2VEC9 5147 aa2.97□□□□□ -1.93
ABCB1-201ENST00000265724 KRTAP9-6A0A140TA67 174 aa2.96□□□□□ -1.94
ABCB1-201ENST00000265724 FCGBPQ9Y6R7 5405 aaPredicted RBP2.96□□□□□ -1.94
ABCB1-201ENST00000265724 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
ABCB1-201ENST00000265724 DSTQ03001 7570 aaKnown RBP2.95□□□□□ -1.94
ABCB1-201ENST00000265724 KMT2DO14686 5537 aa2.94□□□□□ -1.94
ABCB1-201ENST00000265724 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
ABCB1-201ENST00000265724 SYNE2Q8WXH0 6885 aaKnown RBP2.94□□□□□ -1.94
ABCB1-201ENST00000265724 MT4P47944 62 aa2.92□□□□□ -1.94
ABCB1-201ENST00000265724 MT3P25713 68 aa2.91□□□□□ -1.94
ABCB1-201ENST00000265724 MT1AP04731 61 aa2.89□□□□□ -1.95
ABCB1-201ENST00000265724 KRTAP2-3P0C7H8 128 aa2.89□□□□□ -1.95
ABCB1-201ENST00000265724 KRTAP2-4Q9BYR9 128 aa2.89□□□□□ -1.95
ABCB1-201ENST00000265724 KRTAP2-1Q9BYU5 128 aa2.89□□□□□ -1.95
ABCB1-201ENST00000265724 LCE5AQ5TCM9 118 aa2.87□□□□□ -1.95
ABCB1-201ENST00000265724 LCE1AQ5T7P2 110 aa2.84□□□□□ -1.95
ABCB1-201ENST00000265724 KRTAP4-9Q9BYQ8 210 aa2.84□□□□□ -1.95
ABCB1-201ENST00000265724 KRTAP6-3Q3LI67 103 aa2.82□□□□□ -1.96
ABCB1-201ENST00000265724 KRTAP9-7A8MTY7 169 aa2.81□□□□□ -1.96
ABCB1-201ENST00000265724 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.81□□□□□ -1.96
ABCB1-201ENST00000265724 KRTAP6-1Q3LI64 71 aa2.79□□□□□ -1.96
ABCB1-201ENST00000265724 MUC12Q9UKN1 5478 aa2.79□□□□□ -1.96
ABCB1-201ENST00000265724 MACF1Q9UPN3 7388 aaKnown RBP2.77□□□□□ -1.97
ABCB1-201ENST00000265724 PRM1P04553 51 aa2.75□□□□□ -1.97
ABCB1-201ENST00000265724 LCE1DQ5T752 114 aa2.72□□□□□ -1.97
ABCB1-201ENST00000265724 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
ABCB1-201ENST00000265724 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
ABCB1-201ENST00000265724 KRTAP20-1Q3LI63 56 aa2.67□□□□□ -1.98
ABCB1-201ENST00000265724 KRTAP9-4Q9BYQ2 154 aa2.67□□□□□ -1.98
ABCB1-201ENST00000265724 KRTAP5-9P26371 169 aa2.6□□□□□ -1.99
ABCB1-201ENST00000265724 LCE4AQ5TA78 99 aa2.59□□□□□ -1.99
ABCB1-201ENST00000265724 KRTAP2-2Q9BYT5 123 aa2.59□□□□□ -1.99
ABCB1-201ENST00000265724 MDN1Q9NU22 5596 aa2.54□□□□□ -2
ABCB1-201ENST00000265724 LCE1EQ5T753 118 aa2.51□□□□□ -2.01
ABCB1-201ENST00000265724 NEBP20929 6669 aa2.46□□□□□ -2.02
ABCB1-201ENST00000265724 KRTAP4-6Q9BYQ5 205 aa2.46□□□□□ -2.02
ABCB1-201ENST00000265724 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
ABCB1-201ENST00000265724 KRTAP20-2Q3LI61 65 aa2.32□□□□□ -2.04
ABCB1-201ENST00000265724 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
ABCB1-201ENST00000265724 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
ABCB1-201ENST00000265724 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
ABCB1-201ENST00000265724 KRTAP5-4Q6L8H1 288 aa2.15□□□□□ -2.07
ABCB1-201ENST00000265724 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
ABCB1-201ENST00000265724 KRTAP9-9Q9BYP9 154 aa2.14□□□□□ -2.07
ABCB1-201ENST00000265724 MUC5ACP98088 5654 aa2.08□□□□□ -2.08
ABCB1-201ENST00000265724 KRTAP4-11Q9BYQ6 195 aa2.07□□□□□ -2.08
ABCB1-201ENST00000265724 HMCN1Q96RW7 5635 aa2.02□□□□□ -2.09
ABCB1-201ENST00000265724 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
ABCB1-201ENST00000265724 KRTAP4-12Q9BQ66 201 aa1.96□□□□□ -2.1
ABCB1-201ENST00000265724 KRTAP4-2Q9BYR5 136 aa1.96□□□□□ -2.1
ABCB1-201ENST00000265724 KRTAP5-3Q6L8H2 238 aa1.94□□□□□ -2.1
ABCB1-201ENST00000265724 KRTAP5-2Q701N4 177 aa1.88□□□□□ -2.11
ABCB1-201ENST00000265724 AHNAK2Q8IVF2 5795 aa1.88□□□□□ -2.11
ABCB1-201ENST00000265724 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
ABCB1-201ENST00000265724 KRTAP5-10Q6L8G5 202 aa1.73□□□□□ -2.13
ABCB1-201ENST00000265724 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
ABCB1-201ENST00000265724 KRTAP5-1Q6L8H4 278 aa1.66□□□□□ -2.14
ABCB1-201ENST00000265724 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
ABCB1-201ENST00000265724 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.16
ABCB1-201ENST00000265724 KRTAP5-11Q6L8G4 156 aa1.56□□□□□ -2.16
ABCB1-201ENST00000265724 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
ABCB1-201ENST00000265724 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
ABCB1-201ENST00000265724 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.18
ABCB1-201ENST00000265724 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
ABCB1-201ENST00000265724 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 105 ms