RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 MT1MQ8N339 61 aa5.51□□□□□ -1.53
COL5A3-201ENST00000264828 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
COL5A3-201ENST00000264828 MT3P25713 68 aa5.49□□□□□ -1.53
COL5A3-201ENST00000264828 LCE1BQ5T7P3 118 aa5.45□□□□□ -1.54
COL5A3-201ENST00000264828 LCE1DQ5T752 114 aa5.4□□□□□ -1.55
COL5A3-201ENST00000264828 EPPK1P58107 5090 aaKnown RBP5.33□□□□□ -1.56
COL5A3-201ENST00000264828 LCE2AQ5TA79 106 aaPredicted RBP5.3□□□□□ -1.56
COL5A3-201ENST00000264828 KRTAP4-9Q9BYQ8 210 aa5.3□□□□□ -1.56
COL5A3-201ENST00000264828 KRTAP9-6A0A140TA67 174 aa5.25□□□□□ -1.57
COL5A3-201ENST00000264828 ABCA13Q86UQ4 5058 aa5.22□□□□□ -1.57
COL5A3-201ENST00000264828 KRTAP19-7Q3SYF9 63 aa5.16□□□□□ -1.58
COL5A3-201ENST00000264828 MT1AP04731 61 aa5.11□□□□□ -1.59
COL5A3-201ENST00000264828 FAT4Q6V0I7 4981 aa5.11□□□□□ -1.59
COL5A3-201ENST00000264828 KRTAP2-3P0C7H8 128 aa5.1□□□□□ -1.59
COL5A3-201ENST00000264828 KRTAP2-4Q9BYR9 128 aa5.1□□□□□ -1.59
COL5A3-201ENST00000264828 KRTAP2-1Q9BYU5 128 aa5.1□□□□□ -1.59
COL5A3-201ENST00000264828 LCE5AQ5TCM9 118 aa5.07□□□□□ -1.6
COL5A3-201ENST00000264828 HMCN2Q8NDA2 5059 aa5.05□□□□□ -1.6
COL5A3-201ENST00000264828 KRTAP20-1Q3LI63 56 aa5.04□□□□□ -1.6
COL5A3-201ENST00000264828 RNF213Q63HN8 5207 aa4.98□□□□□ -1.61
COL5A3-201ENST00000264828 KRTAP9-7A8MTY7 169 aa4.92□□□□□ -1.62
COL5A3-201ENST00000264828 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
COL5A3-201ENST00000264828 SYNE2Q8WXH0 6885 aaKnown RBP4.91□□□□□ -1.62
COL5A3-201ENST00000264828 KRTAP6-3Q3LI67 103 aa4.91□□□□□ -1.62
COL5A3-201ENST00000264828 KRTAP6-1Q3LI64 71 aa4.88□□□□□ -1.63
COL5A3-201ENST00000264828 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
COL5A3-201ENST00000264828 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
COL5A3-201ENST00000264828 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.79□□□□□ -1.64
COL5A3-201ENST00000264828 KRTAP9-4Q9BYQ2 154 aa4.77□□□□□ -1.65
COL5A3-201ENST00000264828 SYNE1Q8NF91 8797 aaKnown RBP4.72□□□□□ -1.65
COL5A3-201ENST00000264828 FSIP2Q5CZC0 6907 aa4.7□□□□□ -1.66
COL5A3-201ENST00000264828 LCE4AQ5TA78 99 aa4.7□□□□□ -1.66
COL5A3-201ENST00000264828 LCE1CQ5T751 118 aa4.67□□□□□ -1.66
COL5A3-201ENST00000264828 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
COL5A3-201ENST00000264828 LCE1FQ5T754 118 aa4.67□□□□□ -1.66
COL5A3-201ENST00000264828 UBR4Q5T4S7 5183 aa4.64□□□□□ -1.67
COL5A3-201ENST00000264828 KRTAP2-2Q9BYT5 123 aa4.6□□□□□ -1.67
COL5A3-201ENST00000264828 MUC2Q02817 5179 aa4.59□□□□□ -1.67
COL5A3-201ENST00000264828 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
COL5A3-201ENST00000264828 KRTAP4-11Q9BYQ6 195 aa4.2□□□□□ -1.74
COL5A3-201ENST00000264828 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.74
COL5A3-201ENST00000264828 KRTAP5-9P26371 169 aa4.14□□□□□ -1.75
COL5A3-201ENST00000264828 USH2AO75445 5202 aa4.08□□□□□ -1.76
COL5A3-201ENST00000264828 FCGBPQ9Y6R7 5405 aaPredicted RBP4.06□□□□□ -1.76
COL5A3-201ENST00000264828 KMT2DO14686 5537 aa4.04□□□□□ -1.76
COL5A3-201ENST00000264828 KRTAP4-6Q9BYQ5 205 aa4.04□□□□□ -1.76
COL5A3-201ENST00000264828 NEBP20929 6669 aa4.01□□□□□ -1.77
COL5A3-201ENST00000264828 MACF1Q9UPN3 7388 aaKnown RBP3.98□□□□□ -1.77
COL5A3-201ENST00000264828 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.78
COL5A3-201ENST00000264828 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
COL5A3-201ENST00000264828 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
COL5A3-201ENST00000264828 DSTQ03001 7570 aaKnown RBP3.86□□□□□ -1.79
COL5A3-201ENST00000264828 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
COL5A3-201ENST00000264828 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
COL5A3-201ENST00000264828 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
COL5A3-201ENST00000264828 KRTAP5-5Q701N2 237 aaPredicted RBP3.61□□□□□ -1.83
COL5A3-201ENST00000264828 MUC12Q9UKN1 5478 aa3.47□□□□□ -1.85
COL5A3-201ENST00000264828 MUC19Q7Z5P9 8384 aa3.47□□□□□ -1.85
COL5A3-201ENST00000264828 MDN1Q9NU22 5596 aa3.33□□□□□ -1.88
COL5A3-201ENST00000264828 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
COL5A3-201ENST00000264828 KRTAP5-3Q6L8H2 238 aa3.21□□□□□ -1.9
COL5A3-201ENST00000264828 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
COL5A3-201ENST00000264828 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
COL5A3-201ENST00000264828 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.95
COL5A3-201ENST00000264828 KRTAP5-10Q6L8G5 202 aa2.81□□□□□ -1.96
COL5A3-201ENST00000264828 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
COL5A3-201ENST00000264828 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
COL5A3-201ENST00000264828 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
COL5A3-201ENST00000264828 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
COL5A3-201ENST00000264828 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
COL5A3-201ENST00000264828 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
COL5A3-201ENST00000264828 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
COL5A3-201ENST00000264828 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
COL5A3-201ENST00000264828 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
COL5A3-201ENST00000264828 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
COL5A3-201ENST00000264828 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.07
COL5A3-201ENST00000264828 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 13 ms