RNA–Protein interactions for RNA: ENST00000263665.6

CNTN3-201, Transcript of contactin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTN3, Length 4,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-201ENST00000263665 KRTAP2-2Q9BYT5 123 aa1.99□□□□□ -2.09
CNTN3-201ENST00000263665 LCE1AQ5T7P2 110 aa1.98□□□□□ -2.09
CNTN3-201ENST00000263665 PCLOQ9Y6V0 5065 aa1.98□□□□□ -2.09
CNTN3-201ENST00000263665 KRTAP19-3Q7Z4W3 81 aa1.98□□□□□ -2.09
CNTN3-201ENST00000263665 KRTAP4-8Q9BYQ9 185 aa1.97□□□□□ -2.09
CNTN3-201ENST00000263665 KRTAP9-6A8MVA2 160 aa1.96□□□□□ -2.1
CNTN3-201ENST00000263665 KRTAP19-7Q3SYF9 63 aa1.95□□□□□ -2.1
CNTN3-201ENST00000263665 RYR3Q15413 4870 aa1.93□□□□□ -2.1
CNTN3-201ENST00000263665 MT1MQ8N339 61 aa1.93□□□□□ -2.1
CNTN3-201ENST00000263665 KRTAP19-6Q3LI70 58 aa1.93□□□□□ -2.1
CNTN3-201ENST00000263665 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
CNTN3-201ENST00000263665 KRTAP4-8A0A0G2JLE6 195 aa1.92□□□□□ -2.1
CNTN3-201ENST00000263665 KRTAP4-7Q9BYR0 210 aa1.91□□□□□ -2.1
CNTN3-201ENST00000263665 KRTAP6-2Q3LI66 62 aa1.91□□□□□ -2.1
CNTN3-201ENST00000263665 UBR4Q5T4S7 5183 aa1.91□□□□□ -2.1
CNTN3-201ENST00000263665 LRP2P98164 4655 aa1.91□□□□□ -2.1
CNTN3-201ENST00000263665 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.9□□□□□ -2.11
CNTN3-201ENST00000263665 KIAA1109Q2LD37 5005 aa1.89□□□□□ -2.11
CNTN3-201ENST00000263665 KRTAP6-3Q3LI67 103 aa1.89□□□□□ -2.11
CNTN3-201ENST00000263665 HERC2O95714 4834 aa1.89□□□□□ -2.11
CNTN3-201ENST00000263665 KRTAP4-12Q9BQ66 201 aa1.87□□□□□ -2.11
CNTN3-201ENST00000263665 FSIP2Q5CZC0 6907 aa1.86□□□□□ -2.11
CNTN3-201ENST00000263665 KMT2CQ8NEZ4 4911 aaKnown RBP1.84□□□□□ -2.12
CNTN3-201ENST00000263665 KRTAP4-2Q9BYR5 136 aa1.83□□□□□ -2.12
CNTN3-201ENST00000263665 LCE1EQ5T753 118 aa1.83□□□□□ -2.12
CNTN3-201ENST00000263665 EPPK1P58107 5090 aaKnown RBP1.82□□□□□ -2.12
CNTN3-201ENST00000263665 LCE5AQ5TCM9 118 aa1.81□□□□□ -2.12
CNTN3-201ENST00000263665 KRTAP9-9Q9BYP9 154 aa1.81□□□□□ -2.12
CNTN3-201ENST00000263665 KRTAP9-4Q9BYQ2 154 aa1.81□□□□□ -2.12
CNTN3-201ENST00000263665 LPAP08519 4548 aa1.8□□□□□ -2.12
CNTN3-201ENST00000263665 KRTAP5-9P26371 169 aa1.79□□□□□ -2.12
CNTN3-201ENST00000263665 MT4P47944 62 aa1.79□□□□□ -2.12
CNTN3-201ENST00000263665 ABCA13Q86UQ4 5058 aa1.77□□□□□ -2.13
CNTN3-201ENST00000263665 LCE1DQ5T752 114 aa1.76□□□□□ -2.13
CNTN3-201ENST00000263665 KRTAP4-9Q9BYQ8 210 aa1.76□□□□□ -2.13
CNTN3-201ENST00000263665 LCE4AQ5TA78 99 aa1.76□□□□□ -2.13
CNTN3-201ENST00000263665 LCE1FQ5T754 118 aa1.73□□□□□ -2.13
CNTN3-201ENST00000263665 LCE1BQ5T7P3 118 aa1.72□□□□□ -2.13
CNTN3-201ENST00000263665 NEBP20929 6669 aa1.71□□□□□ -2.13
CNTN3-201ENST00000263665 KRTAP4-3Q9BYR4 195 aa1.69□□□□□ -2.14
CNTN3-201ENST00000263665 MACF1Q9UPN3 7388 aaKnown RBP1.69□□□□□ -2.14
CNTN3-201ENST00000263665 KRTAP6-1Q3LI64 71 aa1.69□□□□□ -2.14
CNTN3-201ENST00000263665 HMCN2Q8NDA2 5059 aa1.69□□□□□ -2.14
CNTN3-201ENST00000263665 SYNE1Q8NF91 8797 aaKnown RBP1.68□□□□□ -2.14
CNTN3-201ENST00000263665 SYNE2Q8WXH0 6885 aaKnown RBP1.68□□□□□ -2.14
CNTN3-201ENST00000263665 RNF213Q63HN8 5207 aa1.67□□□□□ -2.14
CNTN3-201ENST00000263665 KRTAP5-5Q701N2 237 aaPredicted RBP1.65□□□□□ -2.15
CNTN3-201ENST00000263665 OBSCNQ5VST9 7968 aa1.61□□□□□ -2.15
CNTN3-201ENST00000263665 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
CNTN3-201ENST00000263665 MUC5BQ9HC84 5762 aaPredicted RBP1.56□□□□□ -2.16
CNTN3-201ENST00000263665 KMT2DO14686 5537 aa1.56□□□□□ -2.16
CNTN3-201ENST00000263665 KRTAP4-11Q9BYQ6 195 aa1.55□□□□□ -2.16
CNTN3-201ENST00000263665 DSTQ03001 7570 aaKnown RBP1.53□□□□□ -2.16
CNTN3-201ENST00000263665 LCE1CQ5T751 118 aa1.53□□□□□ -2.16
CNTN3-201ENST00000263665 KRTAP5-4Q6L8H1 288 aa1.52□□□□□ -2.17
CNTN3-201ENST00000263665 MUC2Q02817 5179 aa1.51□□□□□ -2.17
CNTN3-201ENST00000263665 FAT4Q6V0I7 4981 aa1.51□□□□□ -2.17
CNTN3-201ENST00000263665 KRTAP5-7Q6L8G8 165 aa1.44□□□□□ -2.18
CNTN3-201ENST00000263665 KRTAP5-8O75690 187 aa1.43□□□□□ -2.18
CNTN3-201ENST00000263665 HMCN1Q96RW7 5635 aa1.41□□□□□ -2.18
CNTN3-201ENST00000263665 MDN1Q9NU22 5596 aa1.41□□□□□ -2.18
CNTN3-201ENST00000263665 USH2AO75445 5202 aa1.37□□□□□ -2.19
CNTN3-201ENST00000263665 SSPOA2VEC9 5147 aa1.36□□□□□ -2.19
CNTN3-201ENST00000263665 FCGBPQ9Y6R7 5405 aaPredicted RBP1.34□□□□□ -2.2
CNTN3-201ENST00000263665 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.2
CNTN3-201ENST00000263665 KRTAP20-2Q3LI61 65 aa1.33□□□□□ -2.2
CNTN3-201ENST00000263665 MUC12Q9UKN1 5478 aa1.32□□□□□ -2.2
CNTN3-201ENST00000263665 KRTAP4-4Q9BYR3 166 aa1.25□□□□□ -2.21
CNTN3-201ENST00000263665 KRTAP5-10Q6L8G5 202 aa1.24□□□□□ -2.21
CNTN3-201ENST00000263665 MUC19Q7Z5P9 8384 aa1.24□□□□□ -2.21
CNTN3-201ENST00000263665 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
CNTN3-201ENST00000263665 KRTAP5-11Q6L8G4 156 aa1.14□□□□□ -2.23
CNTN3-201ENST00000263665 KRTAP5-1Q6L8H4 278 aa1.11□□□□□ -2.23
CNTN3-201ENST00000263665 MUC5ACP98088 5654 aa1.1□□□□□ -2.23
CNTN3-201ENST00000263665 PHGR1C9JFL3 82 aa0.99□□□□□ -2.25
CNTN3-201ENST00000263665 KRTAP21-2Q3LI59 83 aa0.97□□□□□ -2.25
CNTN3-201ENST00000263665 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 115.5 ms