RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 MT1MQ8N339 61 aa4.91□□□□□ -1.62
SHANK3-201ENST00000262795 LRP2P98164 4655 aa4.88□□□□□ -1.63
SHANK3-201ENST00000262795 SYNE2Q8WXH0 6885 aaKnown RBP4.84□□□□□ -1.63
SHANK3-201ENST00000262795 BIRC6Q9NR09 4857 aa4.81□□□□□ -1.64
SHANK3-201ENST00000262795 RYR2Q92736 4967 aa4.81□□□□□ -1.64
SHANK3-201ENST00000262795 LCE1CQ5T751 118 aa4.79□□□□□ -1.64
SHANK3-201ENST00000262795 LCE1EQ5T753 118 aa4.79□□□□□ -1.64
SHANK3-201ENST00000262795 LCE1FQ5T754 118 aa4.79□□□□□ -1.64
SHANK3-201ENST00000262795 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
SHANK3-201ENST00000262795 HERC2O95714 4834 aa4.78□□□□□ -1.64
SHANK3-201ENST00000262795 MUC17Q685J3 4493 aa4.75□□□□□ -1.65
SHANK3-201ENST00000262795 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
SHANK3-201ENST00000262795 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
SHANK3-201ENST00000262795 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.69□□□□□ -1.66
SHANK3-201ENST00000262795 HERC1Q15751 4861 aa4.69□□□□□ -1.66
SHANK3-201ENST00000262795 PCLOQ9Y6V0 5065 aa4.66□□□□□ -1.66
SHANK3-201ENST00000262795 KRTAP19-2Q3LHN2 52 aa4.64□□□□□ -1.67
SHANK3-201ENST00000262795 FSIP2Q5CZC0 6907 aa4.64□□□□□ -1.67
SHANK3-201ENST00000262795 KMT2CQ8NEZ4 4911 aaKnown RBP4.6□□□□□ -1.67
SHANK3-201ENST00000262795 KRTAP6-3Q3LI67 103 aa4.55□□□□□ -1.68
SHANK3-201ENST00000262795 LCE2AQ5TA79 106 aaPredicted RBP4.54□□□□□ -1.68
SHANK3-201ENST00000262795 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
SHANK3-201ENST00000262795 KRTAP2-1Q9BYU5 128 aa4.51□□□□□ -1.69
SHANK3-201ENST00000262795 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
SHANK3-201ENST00000262795 MT1AP04731 61 aa4.42□□□□□ -1.7
SHANK3-201ENST00000262795 LCE4AQ5TA78 99 aa4.4□□□□□ -1.71
SHANK3-201ENST00000262795 ABCA13Q86UQ4 5058 aa4.37□□□□□ -1.71
SHANK3-201ENST00000262795 EPPK1P58107 5090 aaKnown RBP4.35□□□□□ -1.71
SHANK3-201ENST00000262795 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
SHANK3-201ENST00000262795 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
SHANK3-201ENST00000262795 KRTAP9-9Q9BYP9 154 aa4.27□□□□□ -1.73
SHANK3-201ENST00000262795 KRTAP9-4Q9BYQ2 154 aa4.22□□□□□ -1.73
SHANK3-201ENST00000262795 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
SHANK3-201ENST00000262795 HMCN2Q8NDA2 5059 aa4.2□□□□□ -1.74
SHANK3-201ENST00000262795 MUC2Q02817 5179 aa4.18□□□□□ -1.74
SHANK3-201ENST00000262795 UBR4Q5T4S7 5183 aa4.14□□□□□ -1.75
SHANK3-201ENST00000262795 FAT4Q6V0I7 4981 aa4.13□□□□□ -1.75
SHANK3-201ENST00000262795 RNF213Q63HN8 5207 aa4.11□□□□□ -1.75
SHANK3-201ENST00000262795 KRTAP4-6Q9BYQ5 205 aa3.9□□□□□ -1.79
SHANK3-201ENST00000262795 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
SHANK3-201ENST00000262795 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
SHANK3-201ENST00000262795 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
SHANK3-201ENST00000262795 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
SHANK3-201ENST00000262795 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
SHANK3-201ENST00000262795 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
SHANK3-201ENST00000262795 KRTAP4-4Q9BYR3 166 aa3.77□□□□□ -1.81
SHANK3-201ENST00000262795 KMT2DO14686 5537 aa3.65□□□□□ -1.82
SHANK3-201ENST00000262795 NEBP20929 6669 aa3.61□□□□□ -1.83
SHANK3-201ENST00000262795 MACF1Q9UPN3 7388 aaKnown RBP3.59□□□□□ -1.84
SHANK3-201ENST00000262795 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
SHANK3-201ENST00000262795 USH2AO75445 5202 aa3.48□□□□□ -1.85
SHANK3-201ENST00000262795 KRTAP5-9P26371 169 aa3.42□□□□□ -1.86
SHANK3-201ENST00000262795 FCGBPQ9Y6R7 5405 aaPredicted RBP3.39□□□□□ -1.87
SHANK3-201ENST00000262795 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
SHANK3-201ENST00000262795 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
SHANK3-201ENST00000262795 SSPOA2VEC9 5147 aa3.24□□□□□ -1.89
SHANK3-201ENST00000262795 MDN1Q9NU22 5596 aa3.04□□□□□ -1.92
SHANK3-201ENST00000262795 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
SHANK3-201ENST00000262795 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
SHANK3-201ENST00000262795 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
SHANK3-201ENST00000262795 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
SHANK3-201ENST00000262795 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.95
SHANK3-201ENST00000262795 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
SHANK3-201ENST00000262795 MUC5ACP98088 5654 aa2.57□□□□□ -2
SHANK3-201ENST00000262795 AHNAK2Q8IVF2 5795 aa2.45□□□□□ -2.02
SHANK3-201ENST00000262795 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
SHANK3-201ENST00000262795 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.02
SHANK3-201ENST00000262795 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
SHANK3-201ENST00000262795 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
SHANK3-201ENST00000262795 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
SHANK3-201ENST00000262795 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
SHANK3-201ENST00000262795 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
SHANK3-201ENST00000262795 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
SHANK3-201ENST00000262795 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
SHANK3-201ENST00000262795 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
SHANK3-201ENST00000262795 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
SHANK3-201ENST00000262795 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 72.6 ms