RNA–Protein interactions for RNA: ENST00000262519.13

SETD1A-201, Transcript of SET domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SETD1A, Length 6,451 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD1A-201ENST00000262519 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
SETD1A-201ENST00000262519 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
SETD1A-201ENST00000262519 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
SETD1A-201ENST00000262519 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
SETD1A-201ENST00000262519 SYNE2Q8WXH0 6885 aaKnown RBP4.03□□□□□ -1.76
SETD1A-201ENST00000262519 KRTAP20-1Q3LI63 56 aa4.01□□□□□ -1.77
SETD1A-201ENST00000262519 LRP2P98164 4655 aa3.99□□□□□ -1.77
SETD1A-201ENST00000262519 KRTAP9-6A0A140TA67 174 aa3.98□□□□□ -1.77
SETD1A-201ENST00000262519 PCLOQ9Y6V0 5065 aa3.97□□□□□ -1.77
SETD1A-201ENST00000262519 TNXBP22105 4242 aa3.89□□□□□ -1.79
SETD1A-201ENST00000262519 KRTAP2-3P0C7H8 128 aa3.89□□□□□ -1.79
SETD1A-201ENST00000262519 KRTAP2-4Q9BYR9 128 aa3.89□□□□□ -1.79
SETD1A-201ENST00000262519 KRTAP2-1Q9BYU5 128 aa3.89□□□□□ -1.79
SETD1A-201ENST00000262519 KMT2CQ8NEZ4 4911 aaKnown RBP3.89□□□□□ -1.79
SETD1A-201ENST00000262519 ABCA13Q86UQ4 5058 aa3.88□□□□□ -1.79
SETD1A-201ENST00000262519 MT1AP04731 61 aa3.88□□□□□ -1.79
SETD1A-201ENST00000262519 EPPK1P58107 5090 aaKnown RBP3.84□□□□□ -1.79
SETD1A-201ENST00000262519 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
SETD1A-201ENST00000262519 KRTAP19-2Q3LHN2 52 aa3.82□□□□□ -1.8
SETD1A-201ENST00000262519 FLGP20930 4061 aaPredicted RBP3.82□□□□□ -1.8
SETD1A-201ENST00000262519 FSIP2Q5CZC0 6907 aa3.81□□□□□ -1.8
SETD1A-201ENST00000262519 KRTAP9-7A8MTY7 169 aa3.81□□□□□ -1.8
SETD1A-201ENST00000262519 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
SETD1A-201ENST00000262519 KRTAP19-7Q3SYF9 63 aa3.75□□□□□ -1.81
SETD1A-201ENST00000262519 SYNE1Q8NF91 8797 aaKnown RBP3.73□□□□□ -1.81
SETD1A-201ENST00000262519 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
SETD1A-201ENST00000262519 UBR4Q5T4S7 5183 aa3.69□□□□□ -1.82
SETD1A-201ENST00000262519 MUC17Q685J3 4493 aa3.68□□□□□ -1.82
SETD1A-201ENST00000262519 RNF213Q63HN8 5207 aa3.64□□□□□ -1.83
SETD1A-201ENST00000262519 KRTAP9-4Q9BYQ2 154 aa3.63□□□□□ -1.83
SETD1A-201ENST00000262519 MUC2Q02817 5179 aa3.6□□□□□ -1.83
SETD1A-201ENST00000262519 HMCN2Q8NDA2 5059 aa3.59□□□□□ -1.83
SETD1A-201ENST00000262519 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
SETD1A-201ENST00000262519 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
SETD1A-201ENST00000262519 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.53□□□□□ -1.84
SETD1A-201ENST00000262519 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
SETD1A-201ENST00000262519 LCE2AQ5TA79 106 aaPredicted RBP3.51□□□□□ -1.85
SETD1A-201ENST00000262519 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
SETD1A-201ENST00000262519 FAT4Q6V0I7 4981 aa3.46□□□□□ -1.86
SETD1A-201ENST00000262519 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
SETD1A-201ENST00000262519 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
SETD1A-201ENST00000262519 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
SETD1A-201ENST00000262519 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
SETD1A-201ENST00000262519 KRTAP4-6Q9BYQ5 205 aa3.2□□□□□ -1.9
SETD1A-201ENST00000262519 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
SETD1A-201ENST00000262519 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
SETD1A-201ENST00000262519 USH2AO75445 5202 aa3.15□□□□□ -1.91
SETD1A-201ENST00000262519 DSTQ03001 7570 aaKnown RBP3.13□□□□□ -1.91
SETD1A-201ENST00000262519 MACF1Q9UPN3 7388 aaKnown RBP3.11□□□□□ -1.91
SETD1A-201ENST00000262519 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.91
SETD1A-201ENST00000262519 KMT2DO14686 5537 aa3.06□□□□□ -1.92
SETD1A-201ENST00000262519 NEBP20929 6669 aa2.94□□□□□ -1.94
SETD1A-201ENST00000262519 SSPOA2VEC9 5147 aa2.92□□□□□ -1.94
SETD1A-201ENST00000262519 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
SETD1A-201ENST00000262519 MDN1Q9NU22 5596 aa2.77□□□□□ -1.97
SETD1A-201ENST00000262519 KRTAP5-9P26371 169 aa2.74□□□□□ -1.97
SETD1A-201ENST00000262519 MUC12Q9UKN1 5478 aa2.6□□□□□ -1.99
SETD1A-201ENST00000262519 GPR98Q8WXG9 6306 aa2.59□□□□□ -1.99
SETD1A-201ENST00000262519 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
SETD1A-201ENST00000262519 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
SETD1A-201ENST00000262519 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
SETD1A-201ENST00000262519 MUC5ACP98088 5654 aa2.31□□□□□ -2.04
SETD1A-201ENST00000262519 KRTAP5-3Q6L8H2 238 aa2.3□□□□□ -2.04
SETD1A-201ENST00000262519 AHNAK2Q8IVF2 5795 aa2.26□□□□□ -2.05
SETD1A-201ENST00000262519 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
SETD1A-201ENST00000262519 HMCN1Q96RW7 5635 aa2.18□□□□□ -2.06
SETD1A-201ENST00000262519 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
SETD1A-201ENST00000262519 KRTAP5-10Q6L8G5 202 aa1.98□□□□□ -2.09
SETD1A-201ENST00000262519 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
SETD1A-201ENST00000262519 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
SETD1A-201ENST00000262519 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
SETD1A-201ENST00000262519 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
SETD1A-201ENST00000262519 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
SETD1A-201ENST00000262519 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
SETD1A-201ENST00000262519 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
SETD1A-201ENST00000262519 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
SETD1A-201ENST00000262519 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 51 ms