RNA–Protein interactions for RNA: ENST00000262059.8

CALCOCO1-201, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CALCOCO1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-201ENST00000262059 KRTAP9-7A8MTY7 169 aa3.37□□□□□ -1.87
CALCOCO1-201ENST00000262059 FSIP2Q5CZC0 6907 aa3.35□□□□□ -1.87
CALCOCO1-201ENST00000262059 SYNE2Q8WXH0 6885 aaKnown RBP3.35□□□□□ -1.87
CALCOCO1-201ENST00000262059 ABCA13Q86UQ4 5058 aa3.35□□□□□ -1.87
CALCOCO1-201ENST00000262059 FLGP20930 4061 aaPredicted RBP3.35□□□□□ -1.87
CALCOCO1-201ENST00000262059 MT1EP04732 61 aa3.33□□□□□ -1.88
CALCOCO1-201ENST00000262059 UBR4Q5T4S7 5183 aa3.33□□□□□ -1.88
CALCOCO1-201ENST00000262059 LOC100996750A0A140TA64 210 aa3.32□□□□□ -1.88
CALCOCO1-201ENST00000262059 MT3P25713 68 aa3.29□□□□□ -1.88
CALCOCO1-201ENST00000262059 LCE2AQ5TA79 106 aaPredicted RBP3.25□□□□□ -1.89
CALCOCO1-201ENST00000262059 KRTAP19-6Q3LI70 58 aa3.24□□□□□ -1.89
CALCOCO1-201ENST00000262059 MT1MQ8N339 61 aa3.24□□□□□ -1.89
CALCOCO1-201ENST00000262059 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
CALCOCO1-201ENST00000262059 KRTAP4-9Q9BYQ8 210 aa3.22□□□□□ -1.89
CALCOCO1-201ENST00000262059 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
CALCOCO1-201ENST00000262059 LCE1DQ5T752 114 aa3.2□□□□□ -1.9
CALCOCO1-201ENST00000262059 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
CALCOCO1-201ENST00000262059 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
CALCOCO1-201ENST00000262059 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
CALCOCO1-201ENST00000262059 MACF1Q9UPN3 7388 aaKnown RBP3.17□□□□□ -1.9
CALCOCO1-201ENST00000262059 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
CALCOCO1-201ENST00000262059 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
CALCOCO1-201ENST00000262059 HMCN2Q8NDA2 5059 aa3.12□□□□□ -1.91
CALCOCO1-201ENST00000262059 MUC2Q02817 5179 aa3.11□□□□□ -1.91
CALCOCO1-201ENST00000262059 KRTAP19-7Q3SYF9 63 aa3.11□□□□□ -1.91
CALCOCO1-201ENST00000262059 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.1□□□□□ -1.91
CALCOCO1-201ENST00000262059 LCE5AQ5TCM9 118 aa3.1□□□□□ -1.91
CALCOCO1-201ENST00000262059 RNF213Q63HN8 5207 aa3.1□□□□□ -1.91
CALCOCO1-201ENST00000262059 MT1AP04731 61 aa3.06□□□□□ -1.92
CALCOCO1-201ENST00000262059 KRTAP2-2Q9BYT5 123 aa3.06□□□□□ -1.92
CALCOCO1-201ENST00000262059 FAT4Q6V0I7 4981 aa3.05□□□□□ -1.92
CALCOCO1-201ENST00000262059 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
CALCOCO1-201ENST00000262059 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
CALCOCO1-201ENST00000262059 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
CALCOCO1-201ENST00000262059 LCE1AQ5T7P2 110 aa2.98□□□□□ -1.93
CALCOCO1-201ENST00000262059 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
CALCOCO1-201ENST00000262059 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
CALCOCO1-201ENST00000262059 LCE1EQ5T753 118 aa2.9□□□□□ -1.95
CALCOCO1-201ENST00000262059 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
CALCOCO1-201ENST00000262059 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
CALCOCO1-201ENST00000262059 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
CALCOCO1-201ENST00000262059 KRTAP9-4Q9BYQ2 154 aa2.83□□□□□ -1.96
CALCOCO1-201ENST00000262059 NEBP20929 6669 aa2.81□□□□□ -1.96
CALCOCO1-201ENST00000262059 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
CALCOCO1-201ENST00000262059 KMT2DO14686 5537 aa2.75□□□□□ -1.97
CALCOCO1-201ENST00000262059 MDN1Q9NU22 5596 aa2.67□□□□□ -1.98
CALCOCO1-201ENST00000262059 USH2AO75445 5202 aa2.64□□□□□ -1.99
CALCOCO1-201ENST00000262059 FCGBPQ9Y6R7 5405 aaPredicted RBP2.63□□□□□ -1.99
CALCOCO1-201ENST00000262059 KRTAP4-11Q9BYQ6 195 aa2.61□□□□□ -1.99
CALCOCO1-201ENST00000262059 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
CALCOCO1-201ENST00000262059 KRTAP5-9P26371 169 aa2.55□□□□□ -2
CALCOCO1-201ENST00000262059 SSPOA2VEC9 5147 aa2.51□□□□□ -2.01
CALCOCO1-201ENST00000262059 KRTAP4-6Q9BYQ5 205 aa2.37□□□□□ -2.03
CALCOCO1-201ENST00000262059 MUC12Q9UKN1 5478 aa2.33□□□□□ -2.04
CALCOCO1-201ENST00000262059 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
CALCOCO1-201ENST00000262059 KRTAP20-2Q3LI61 65 aa2.32□□□□□ -2.04
CALCOCO1-201ENST00000262059 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
CALCOCO1-201ENST00000262059 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
CALCOCO1-201ENST00000262059 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
CALCOCO1-201ENST00000262059 KRTAP4-2Q9BYR5 136 aa2.24□□□□□ -2.05
CALCOCO1-201ENST00000262059 KRTAP5-4Q6L8H1 288 aa2.2□□□□□ -2.06
CALCOCO1-201ENST00000262059 KRTAP5-3Q6L8H2 238 aa2.08□□□□□ -2.08
CALCOCO1-201ENST00000262059 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
CALCOCO1-201ENST00000262059 MUC5ACP98088 5654 aa2.03□□□□□ -2.08
CALCOCO1-201ENST00000262059 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
CALCOCO1-201ENST00000262059 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
CALCOCO1-201ENST00000262059 KRTAP5-8O75690 187 aa1.84□□□□□ -2.11
CALCOCO1-201ENST00000262059 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
CALCOCO1-201ENST00000262059 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
CALCOCO1-201ENST00000262059 KRTAP5-2Q701N4 177 aa1.74□□□□□ -2.13
CALCOCO1-201ENST00000262059 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
CALCOCO1-201ENST00000262059 KRTAP5-1Q6L8H4 278 aa1.52□□□□□ -2.17
CALCOCO1-201ENST00000262059 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
CALCOCO1-201ENST00000262059 KRTAP5-11Q6L8G4 156 aa1.48□□□□□ -2.17
CALCOCO1-201ENST00000262059 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
CALCOCO1-201ENST00000262059 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.38□□□□□ -2.19
CALCOCO1-201ENST00000262059 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 70 ms