RNA–Protein interactions for RNA: ENST00000261833.11

CIT-201, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIT, Length 8,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-201ENST00000261833 KRTAP19-6Q3LI70 58 aa2.95□□□□□ -1.94
CIT-201ENST00000261833 MT1MQ8N339 61 aa2.94□□□□□ -1.94
CIT-201ENST00000261833 MT1AP04731 61 aa2.92□□□□□ -1.94
CIT-201ENST00000261833 HERC1Q15751 4861 aa2.91□□□□□ -1.94
CIT-201ENST00000261833 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
CIT-201ENST00000261833 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
CIT-201ENST00000261833 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
CIT-201ENST00000261833 LCE1AQ5T7P2 110 aa2.91□□□□□ -1.94
CIT-201ENST00000261833 LOC100996750A0A140TA64 210 aa2.89□□□□□ -1.95
CIT-201ENST00000261833 RYR3Q15413 4870 aa2.89□□□□□ -1.95
CIT-201ENST00000261833 RYR1P21817 5038 aa2.86□□□□□ -1.95
CIT-201ENST00000261833 HERC2O95714 4834 aa2.85□□□□□ -1.95
CIT-201ENST00000261833 PCLOQ9Y6V0 5065 aa2.82□□□□□ -1.96
CIT-201ENST00000261833 KRTAP19-7Q3SYF9 63 aa2.81□□□□□ -1.96
CIT-201ENST00000261833 LCE4AQ5TA78 99 aa2.77□□□□□ -1.97
CIT-201ENST00000261833 KRTAP4-9Q9BYQ8 210 aa2.77□□□□□ -1.97
CIT-201ENST00000261833 KRTAP4-3Q9BYR4 195 aa2.77□□□□□ -1.97
CIT-201ENST00000261833 BIRC6Q9NR09 4857 aa2.76□□□□□ -1.97
CIT-201ENST00000261833 KRTAP9-6A8MVA2 160 aa2.72□□□□□ -1.97
CIT-201ENST00000261833 KRTAP2-2Q9BYT5 123 aa2.72□□□□□ -1.97
CIT-201ENST00000261833 KRTAP6-3Q3LI67 103 aa2.68□□□□□ -1.98
CIT-201ENST00000261833 RYR2Q92736 4967 aa2.68□□□□□ -1.98
CIT-201ENST00000261833 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.68□□□□□ -1.98
CIT-201ENST00000261833 KRTAP6-2Q3LI66 62 aa2.68□□□□□ -1.98
CIT-201ENST00000261833 SYNE2Q8WXH0 6885 aaKnown RBP2.66□□□□□ -1.98
CIT-201ENST00000261833 HMCN2Q8NDA2 5059 aa2.66□□□□□ -1.98
CIT-201ENST00000261833 KRTAP9-9Q9BYP9 154 aa2.66□□□□□ -1.98
CIT-201ENST00000261833 LCE2AQ5TA79 106 aaPredicted RBP2.59□□□□□ -1.99
CIT-201ENST00000261833 KRTAP6-1Q3LI64 71 aa2.58□□□□□ -2
CIT-201ENST00000261833 KRTAP9-4Q9BYQ2 154 aa2.57□□□□□ -2
CIT-201ENST00000261833 KIAA1109Q2LD37 5005 aa2.48□□□□□ -2.01
CIT-201ENST00000261833 SYNE1Q8NF91 8797 aaKnown RBP2.48□□□□□ -2.01
CIT-201ENST00000261833 MUC2Q02817 5179 aa2.47□□□□□ -2.01
CIT-201ENST00000261833 ABCA13Q86UQ4 5058 aa2.41□□□□□ -2.02
CIT-201ENST00000261833 UBR4Q5T4S7 5183 aa2.4□□□□□ -2.02
CIT-201ENST00000261833 KRTAP20-2Q3LI61 65 aa2.4□□□□□ -2.03
CIT-201ENST00000261833 EPPK1P58107 5090 aaKnown RBP2.35□□□□□ -2.03
CIT-201ENST00000261833 KMT2DO14686 5537 aa2.34□□□□□ -2.04
CIT-201ENST00000261833 FSIP2Q5CZC0 6907 aa2.33□□□□□ -2.04
CIT-201ENST00000261833 SSPOA2VEC9 5147 aa2.33□□□□□ -2.04
CIT-201ENST00000261833 FAT4Q6V0I7 4981 aa2.33□□□□□ -2.04
CIT-201ENST00000261833 USH2AO75445 5202 aa2.27□□□□□ -2.05
CIT-201ENST00000261833 RNF213Q63HN8 5207 aa2.26□□□□□ -2.05
CIT-201ENST00000261833 KRTAP4-11Q9BYQ6 195 aa2.25□□□□□ -2.05
CIT-201ENST00000261833 KRTAP4-6Q9BYQ5 205 aa2.24□□□□□ -2.05
CIT-201ENST00000261833 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
CIT-201ENST00000261833 KRTAP4-12Q9BQ66 201 aa2.2□□□□□ -2.06
CIT-201ENST00000261833 KRTAP4-2Q9BYR5 136 aa2.2□□□□□ -2.06
CIT-201ENST00000261833 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
CIT-201ENST00000261833 KRTAP5-9P26371 169 aa2.12□□□□□ -2.07
CIT-201ENST00000261833 OBSCNQ5VST9 7968 aa2.07□□□□□ -2.08
CIT-201ENST00000261833 GPR98Q8WXG9 6306 aa2.01□□□□□ -2.09
CIT-201ENST00000261833 MACF1Q9UPN3 7388 aaKnown RBP1.98□□□□□ -2.09
CIT-201ENST00000261833 KRTAP5-4Q6L8H1 288 aa1.93□□□□□ -2.1
CIT-201ENST00000261833 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
CIT-201ENST00000261833 MDN1Q9NU22 5596 aa1.9□□□□□ -2.11
CIT-201ENST00000261833 NEBP20929 6669 aa1.87□□□□□ -2.11
CIT-201ENST00000261833 DSTQ03001 7570 aaKnown RBP1.87□□□□□ -2.11
CIT-201ENST00000261833 MUC12Q9UKN1 5478 aa1.86□□□□□ -2.11
CIT-201ENST00000261833 MUC5BQ9HC84 5762 aaPredicted RBP1.86□□□□□ -2.11
CIT-201ENST00000261833 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
CIT-201ENST00000261833 FCGBPQ9Y6R7 5405 aaPredicted RBP1.78□□□□□ -2.12
CIT-201ENST00000261833 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
CIT-201ENST00000261833 AHNAK2Q8IVF2 5795 aa1.72□□□□□ -2.13
CIT-201ENST00000261833 KRTAP5-3Q6L8H2 238 aa1.72□□□□□ -2.13
CIT-201ENST00000261833 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
CIT-201ENST00000261833 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
CIT-201ENST00000261833 KRTAP5-2Q701N4 177 aa1.59□□□□□ -2.15
CIT-201ENST00000261833 KRTAP5-8O75690 187 aa1.55□□□□□ -2.16
CIT-201ENST00000261833 MUC5ACP98088 5654 aa1.52□□□□□ -2.17
CIT-201ENST00000261833 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
CIT-201ENST00000261833 KRTAP5-1Q6L8H4 278 aa1.43□□□□□ -2.18
CIT-201ENST00000261833 KRTAP5-11Q6L8G4 156 aa1.41□□□□□ -2.18
CIT-201ENST00000261833 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
CIT-201ENST00000261833 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.38□□□□□ -2.19
CIT-201ENST00000261833 KRTAP5-7Q6L8G8 165 aa1.28□□□□□ -2.2
CIT-201ENST00000261833 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 12 ms