RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 KRTAP2-3P0C7H8 128 aa4.28□□□□□ -1.72
TMEM260-201ENST00000261556 KRTAP2-4Q9BYR9 128 aa4.28□□□□□ -1.72
TMEM260-201ENST00000261556 KRTAP2-1Q9BYU5 128 aa4.28□□□□□ -1.72
TMEM260-201ENST00000261556 LCE3BQ5TA77 95 aa4.26□□□□□ -1.73
TMEM260-201ENST00000261556 SPRR2DP22532 72 aa4.26□□□□□ -1.73
TMEM260-201ENST00000261556 PRM1P04553 51 aa4.2□□□□□ -1.74
TMEM260-201ENST00000261556 KRTAP19-3Q7Z4W3 81 aa4.14□□□□□ -1.75
TMEM260-201ENST00000261556 USH2AO75445 5202 aa4.13□□□□□ -1.75
TMEM260-201ENST00000261556 LOC100996750A0A140TA64 210 aa4.12□□□□□ -1.75
TMEM260-201ENST00000261556 KRTAP9-2Q9BYQ4 174 aa4.11□□□□□ -1.75
TMEM260-201ENST00000261556 MT1LQ93083 61 aa4.09□□□□□ -1.75
TMEM260-201ENST00000261556 KMT2DO14686 5537 aa4.09□□□□□ -1.75
TMEM260-201ENST00000261556 MT1EP04732 61 aa4.08□□□□□ -1.76
TMEM260-201ENST00000261556 FCGBPQ9Y6R7 5405 aaPredicted RBP4.08□□□□□ -1.76
TMEM260-201ENST00000261556 KRTAP4-9Q9BYQ8 210 aa4.08□□□□□ -1.76
TMEM260-201ENST00000261556 KRTAP19-6Q3LI70 58 aa4.05□□□□□ -1.76
TMEM260-201ENST00000261556 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
TMEM260-201ENST00000261556 DSTQ03001 7570 aaKnown RBP4.03□□□□□ -1.76
TMEM260-201ENST00000261556 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
TMEM260-201ENST00000261556 KRTAP4-3Q9BYR4 195 aa3.98□□□□□ -1.77
TMEM260-201ENST00000261556 KRTAP9-7A8MTY7 169 aa3.97□□□□□ -1.77
TMEM260-201ENST00000261556 MT1MQ8N339 61 aa3.95□□□□□ -1.78
TMEM260-201ENST00000261556 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
TMEM260-201ENST00000261556 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
TMEM260-201ENST00000261556 KRTAP19-7Q3SYF9 63 aa3.87□□□□□ -1.79
TMEM260-201ENST00000261556 SSPOA2VEC9 5147 aa3.87□□□□□ -1.79
TMEM260-201ENST00000261556 MUC19Q7Z5P9 8384 aa3.85□□□□□ -1.79
TMEM260-201ENST00000261556 MT4P47944 62 aa3.84□□□□□ -1.79
TMEM260-201ENST00000261556 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
TMEM260-201ENST00000261556 KRTAP9-6A0A140TA67 174 aa3.84□□□□□ -1.8
TMEM260-201ENST00000261556 MACF1Q9UPN3 7388 aaKnown RBP3.82□□□□□ -1.8
TMEM260-201ENST00000261556 MT3P25713 68 aa3.77□□□□□ -1.81
TMEM260-201ENST00000261556 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
TMEM260-201ENST00000261556 KRTAP6-2Q3LI66 62 aa3.67□□□□□ -1.82
TMEM260-201ENST00000261556 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
TMEM260-201ENST00000261556 MT1AP04731 61 aa3.61□□□□□ -1.83
TMEM260-201ENST00000261556 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
TMEM260-201ENST00000261556 KRTAP2-2Q9BYT5 123 aa3.6□□□□□ -1.83
TMEM260-201ENST00000261556 MUC12Q9UKN1 5478 aa3.56□□□□□ -1.84
TMEM260-201ENST00000261556 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.56□□□□□ -1.84
TMEM260-201ENST00000261556 LCE5AQ5TCM9 118 aa3.51□□□□□ -1.85
TMEM260-201ENST00000261556 KRTAP20-1Q3LI63 56 aa3.51□□□□□ -1.85
TMEM260-201ENST00000261556 MDN1Q9NU22 5596 aa3.49□□□□□ -1.85
TMEM260-201ENST00000261556 KRTAP6-1Q3LI64 71 aa3.46□□□□□ -1.86
TMEM260-201ENST00000261556 KRTAP5-5Q701N2 237 aaPredicted RBP3.44□□□□□ -1.86
TMEM260-201ENST00000261556 KRTAP9-4Q9BYQ2 154 aa3.31□□□□□ -1.88
TMEM260-201ENST00000261556 LCE4AQ5TA78 99 aa3.3□□□□□ -1.88
TMEM260-201ENST00000261556 KRTAP5-9P26371 169 aa3.28□□□□□ -1.88
TMEM260-201ENST00000261556 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
TMEM260-201ENST00000261556 KRTAP4-6Q9BYQ5 205 aa3.26□□□□□ -1.89
TMEM260-201ENST00000261556 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
TMEM260-201ENST00000261556 NEBP20929 6669 aa3.19□□□□□ -1.9
TMEM260-201ENST00000261556 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
TMEM260-201ENST00000261556 LCE1CQ5T751 118 aa3□□□□□ -1.93
TMEM260-201ENST00000261556 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
TMEM260-201ENST00000261556 KRTAP9-9Q9BYP9 154 aa2.95□□□□□ -1.94
TMEM260-201ENST00000261556 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
TMEM260-201ENST00000261556 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
TMEM260-201ENST00000261556 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
TMEM260-201ENST00000261556 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
TMEM260-201ENST00000261556 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.98
TMEM260-201ENST00000261556 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
TMEM260-201ENST00000261556 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
TMEM260-201ENST00000261556 KRTAP5-3Q6L8H2 238 aa2.45□□□□□ -2.02
TMEM260-201ENST00000261556 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
TMEM260-201ENST00000261556 KRTAP5-10Q6L8G5 202 aa2.39□□□□□ -2.03
TMEM260-201ENST00000261556 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
TMEM260-201ENST00000261556 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
TMEM260-201ENST00000261556 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
TMEM260-201ENST00000261556 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
TMEM260-201ENST00000261556 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
TMEM260-201ENST00000261556 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
TMEM260-201ENST00000261556 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
TMEM260-201ENST00000261556 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
TMEM260-201ENST00000261556 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
TMEM260-201ENST00000261556 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
TMEM260-201ENST00000261556 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 204.9 ms