RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 CMYA5Q8N3K9 4069 aa3.13□□□□□ -1.91
TRPS1-201ENST00000220888 KRTAP19-2Q3LHN2 52 aa3.13□□□□□ -1.91
TRPS1-201ENST00000220888 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
TRPS1-201ENST00000220888 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
TRPS1-201ENST00000220888 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
TRPS1-201ENST00000220888 KMT2CQ8NEZ4 4911 aaKnown RBP3.1□□□□□ -1.91
TRPS1-201ENST00000220888 MT1AP04731 61 aa3.1□□□□□ -1.91
TRPS1-201ENST00000220888 SYNE2Q8WXH0 6885 aaKnown RBP3.08□□□□□ -1.92
TRPS1-201ENST00000220888 KRTAP6-3Q3LI67 103 aa3.06□□□□□ -1.92
TRPS1-201ENST00000220888 LCE2AQ5TA79 106 aaPredicted RBP3.05□□□□□ -1.92
TRPS1-201ENST00000220888 ABCA13Q86UQ4 5058 aa3.03□□□□□ -1.92
TRPS1-201ENST00000220888 LCE1AQ5T7P2 110 aa3.02□□□□□ -1.93
TRPS1-201ENST00000220888 HECTD4Q9Y4D8 3996 aa3□□□□□ -1.93
TRPS1-201ENST00000220888 PKHD1P08F94 4074 aa2.99□□□□□ -1.93
TRPS1-201ENST00000220888 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
TRPS1-201ENST00000220888 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
TRPS1-201ENST00000220888 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
TRPS1-201ENST00000220888 KRTAP2-2Q9BYT5 123 aa2.98□□□□□ -1.93
TRPS1-201ENST00000220888 KRTAP2-1Q9BYU5 128 aa2.98□□□□□ -1.93
TRPS1-201ENST00000220888 UBR4Q5T4S7 5183 aa2.98□□□□□ -1.93
TRPS1-201ENST00000220888 LCE4AQ5TA78 99 aa2.98□□□□□ -1.93
TRPS1-201ENST00000220888 FSIP2Q5CZC0 6907 aa2.97□□□□□ -1.93
TRPS1-201ENST00000220888 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.96□□□□□ -1.94
TRPS1-201ENST00000220888 KRTAP4-9Q9BYQ8 210 aa2.96□□□□□ -1.94
TRPS1-201ENST00000220888 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.94
TRPS1-201ENST00000220888 HYDINQ4G0P3 5121 aa2.95□□□□□ -1.94
TRPS1-201ENST00000220888 MUC17Q685J3 4493 aa2.94□□□□□ -1.94
TRPS1-201ENST00000220888 LPAP08519 4548 aa2.93□□□□□ -1.94
TRPS1-201ENST00000220888 RNF213Q63HN8 5207 aa2.92□□□□□ -1.94
TRPS1-201ENST00000220888 FLGP20930 4061 aaPredicted RBP2.91□□□□□ -1.94
TRPS1-201ENST00000220888 MUC2Q02817 5179 aa2.91□□□□□ -1.94
TRPS1-201ENST00000220888 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
TRPS1-201ENST00000220888 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
TRPS1-201ENST00000220888 KRTAP9-4Q9BYQ2 154 aa2.84□□□□□ -1.96
TRPS1-201ENST00000220888 FAT4Q6V0I7 4981 aa2.83□□□□□ -1.96
TRPS1-201ENST00000220888 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
TRPS1-201ENST00000220888 KRTAP9-9Q9BYP9 154 aa2.75□□□□□ -1.97
TRPS1-201ENST00000220888 HMCN2Q8NDA2 5059 aa2.69□□□□□ -1.98
TRPS1-201ENST00000220888 TNXBP22105 4242 aa2.69□□□□□ -1.98
TRPS1-201ENST00000220888 MACF1Q9UPN3 7388 aaKnown RBP2.66□□□□□ -1.98
TRPS1-201ENST00000220888 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
TRPS1-201ENST00000220888 NEBP20929 6669 aa2.55□□□□□ -2
TRPS1-201ENST00000220888 KRTAP9-6A8MVA2 160 aa2.55□□□□□ -2
TRPS1-201ENST00000220888 DSTQ03001 7570 aaKnown RBP2.53□□□□□ -2.01
TRPS1-201ENST00000220888 USH2AO75445 5202 aa2.5□□□□□ -2.01
TRPS1-201ENST00000220888 FCGBPQ9Y6R7 5405 aaPredicted RBP2.4□□□□□ -2.03
TRPS1-201ENST00000220888 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
TRPS1-201ENST00000220888 KMT2DO14686 5537 aa2.39□□□□□ -2.03
TRPS1-201ENST00000220888 KRTAP5-9P26371 169 aa2.38□□□□□ -2.03
TRPS1-201ENST00000220888 KRTAP4-6Q9BYQ5 205 aa2.38□□□□□ -2.03
TRPS1-201ENST00000220888 KRTAP20-2Q3LI61 65 aa2.37□□□□□ -2.03
TRPS1-201ENST00000220888 MDN1Q9NU22 5596 aa2.33□□□□□ -2.04
TRPS1-201ENST00000220888 KRTAP4-11Q9BYQ6 195 aa2.31□□□□□ -2.04
TRPS1-201ENST00000220888 MUC12Q9UKN1 5478 aa2.3□□□□□ -2.04
TRPS1-201ENST00000220888 KRTAP4-12Q9BQ66 201 aa2.28□□□□□ -2.05
TRPS1-201ENST00000220888 KRTAP4-2Q9BYR5 136 aa2.28□□□□□ -2.05
TRPS1-201ENST00000220888 SSPOA2VEC9 5147 aa2.26□□□□□ -2.05
TRPS1-201ENST00000220888 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
TRPS1-201ENST00000220888 KRTAP5-4Q6L8H1 288 aa2.19□□□□□ -2.06
TRPS1-201ENST00000220888 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
TRPS1-201ENST00000220888 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
TRPS1-201ENST00000220888 KRTAP5-5Q701N2 237 aaPredicted RBP1.93□□□□□ -2.1
TRPS1-201ENST00000220888 MUC5ACP98088 5654 aa1.9□□□□□ -2.11
TRPS1-201ENST00000220888 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.12
TRPS1-201ENST00000220888 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
TRPS1-201ENST00000220888 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
TRPS1-201ENST00000220888 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
TRPS1-201ENST00000220888 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
TRPS1-201ENST00000220888 KRTAP5-10Q6L8G5 202 aa1.54□□□□□ -2.16
TRPS1-201ENST00000220888 KRTAP5-2Q701N4 177 aa1.5□□□□□ -2.17
TRPS1-201ENST00000220888 KRTAP5-11Q6L8G4 156 aa1.49□□□□□ -2.17
TRPS1-201ENST00000220888 KRTAP5-1Q6L8H4 278 aa1.41□□□□□ -2.18
TRPS1-201ENST00000220888 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
TRPS1-201ENST00000220888 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
TRPS1-201ENST00000220888 KRTAP5-7Q6L8G8 165 aa1.26□□□□□ -2.21
TRPS1-201ENST00000220888 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.22□□□□□ -2.21
TRPS1-201ENST00000220888 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 70 ms