RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
USP31-201ENST00000219689 MT1AP04731 61 aa3.05□□□□□ -1.92
USP31-201ENST00000219689 DNHD1Q96M86 4753 aa3.05□□□□□ -1.92
USP31-201ENST00000219689 KRTAP19-2Q3LHN2 52 aa3.02□□□□□ -1.93
USP31-201ENST00000219689 RYR3Q15413 4870 aa3.01□□□□□ -1.93
USP31-201ENST00000219689 KMT2CQ8NEZ4 4911 aaKnown RBP3.01□□□□□ -1.93
USP31-201ENST00000219689 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.94
USP31-201ENST00000219689 SYNE1Q8NF91 8797 aaKnown RBP2.96□□□□□ -1.94
USP31-201ENST00000219689 SYNE2Q8WXH0 6885 aaKnown RBP2.94□□□□□ -1.94
USP31-201ENST00000219689 KRTAP2-2Q9BYT5 123 aa2.93□□□□□ -1.94
USP31-201ENST00000219689 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
USP31-201ENST00000219689 BIRC6Q9NR09 4857 aa2.91□□□□□ -1.94
USP31-201ENST00000219689 LCE5AQ5TCM9 118 aa2.89□□□□□ -1.95
USP31-201ENST00000219689 HYDINQ4G0P3 5121 aa2.86□□□□□ -1.95
USP31-201ENST00000219689 HERC1Q15751 4861 aa2.85□□□□□ -1.95
USP31-201ENST00000219689 LCE4AQ5TA78 99 aa2.78□□□□□ -1.96
USP31-201ENST00000219689 LCE1AQ5T7P2 110 aa2.78□□□□□ -1.96
USP31-201ENST00000219689 KRTAP19-6Q3LI70 58 aa2.78□□□□□ -1.96
USP31-201ENST00000219689 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
USP31-201ENST00000219689 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
USP31-201ENST00000219689 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
USP31-201ENST00000219689 KRTAP9-4Q9BYQ2 154 aa2.76□□□□□ -1.97
USP31-201ENST00000219689 KRTAP9-6A0A140TA67 174 aa2.76□□□□□ -1.97
USP31-201ENST00000219689 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
USP31-201ENST00000219689 HERC2O95714 4834 aa2.67□□□□□ -1.98
USP31-201ENST00000219689 RYR2Q92736 4967 aa2.6□□□□□ -1.99
USP31-201ENST00000219689 HMCN2Q8NDA2 5059 aa2.59□□□□□ -1.99
USP31-201ENST00000219689 ABCA13Q86UQ4 5058 aa2.54□□□□□ -2
USP31-201ENST00000219689 MUC2Q02817 5179 aa2.52□□□□□ -2.01
USP31-201ENST00000219689 KRTAP6-3Q3LI67 103 aa2.5□□□□□ -2.01
USP31-201ENST00000219689 KIAA1109Q2LD37 5005 aa2.5□□□□□ -2.01
USP31-201ENST00000219689 EPPK1P58107 5090 aaKnown RBP2.48□□□□□ -2.01
USP31-201ENST00000219689 KRTAP5-5Q701N2 237 aaPredicted RBP2.46□□□□□ -2.02
USP31-201ENST00000219689 KRTAP20-1Q3LI63 56 aa2.45□□□□□ -2.02
USP31-201ENST00000219689 KMT2DO14686 5537 aa2.43□□□□□ -2.02
USP31-201ENST00000219689 FSIP2Q5CZC0 6907 aa2.43□□□□□ -2.02
USP31-201ENST00000219689 UBR4Q5T4S7 5183 aa2.42□□□□□ -2.02
USP31-201ENST00000219689 RNF213Q63HN8 5207 aa2.36□□□□□ -2.03
USP31-201ENST00000219689 FAT4Q6V0I7 4981 aa2.35□□□□□ -2.03
USP31-201ENST00000219689 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
USP31-201ENST00000219689 LCE2AQ5TA79 106 aaPredicted RBP2.33□□□□□ -2.04
USP31-201ENST00000219689 KRTAP9-9Q9BYP9 154 aa2.32□□□□□ -2.04
USP31-201ENST00000219689 KRTAP20-2Q3LI61 65 aa2.3□□□□□ -2.04
USP31-201ENST00000219689 FCGBPQ9Y6R7 5405 aaPredicted RBP2.22□□□□□ -2.05
USP31-201ENST00000219689 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.15□□□□□ -2.06
USP31-201ENST00000219689 USH2AO75445 5202 aa2.14□□□□□ -2.07
USP31-201ENST00000219689 KRTAP4-6Q9BYQ5 205 aa2.13□□□□□ -2.07
USP31-201ENST00000219689 KRTAP4-12Q9BQ66 201 aa2.11□□□□□ -2.07
USP31-201ENST00000219689 KRTAP4-2Q9BYR5 136 aa2.11□□□□□ -2.07
USP31-201ENST00000219689 DSTQ03001 7570 aaKnown RBP2.1□□□□□ -2.07
USP31-201ENST00000219689 MDN1Q9NU22 5596 aa2.05□□□□□ -2.08
USP31-201ENST00000219689 OBSCNQ5VST9 7968 aa2.03□□□□□ -2.08
USP31-201ENST00000219689 KRTAP5-9P26371 169 aa1.93□□□□□ -2.1
USP31-201ENST00000219689 MUC12Q9UKN1 5478 aa1.9□□□□□ -2.1
USP31-201ENST00000219689 SSPOA2VEC9 5147 aa1.89□□□□□ -2.11
USP31-201ENST00000219689 KRTAP5-4Q6L8H1 288 aa1.86□□□□□ -2.11
USP31-201ENST00000219689 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
USP31-201ENST00000219689 NEBP20929 6669 aa1.8□□□□□ -2.12
USP31-201ENST00000219689 KRTAP5-2Q701N4 177 aa1.78□□□□□ -2.12
USP31-201ENST00000219689 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
USP31-201ENST00000219689 MACF1Q9UPN3 7388 aaKnown RBP1.73□□□□□ -2.13
USP31-201ENST00000219689 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
USP31-201ENST00000219689 HMCN1Q96RW7 5635 aa1.67□□□□□ -2.14
USP31-201ENST00000219689 MUC5ACP98088 5654 aa1.65□□□□□ -2.15
USP31-201ENST00000219689 MUC5BQ9HC84 5762 aaPredicted RBP1.63□□□□□ -2.15
USP31-201ENST00000219689 KRTAP5-3Q6L8H2 238 aa1.59□□□□□ -2.15
USP31-201ENST00000219689 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
USP31-201ENST00000219689 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.16
USP31-201ENST00000219689 KRTAP5-1Q6L8H4 278 aa1.51□□□□□ -2.17
USP31-201ENST00000219689 KRTAP5-8O75690 187 aa1.43□□□□□ -2.18
USP31-201ENST00000219689 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
USP31-201ENST00000219689 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
USP31-201ENST00000219689 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
USP31-201ENST00000219689 KRTAP5-11Q6L8G4 156 aa1.34□□□□□ -2.2
USP31-201ENST00000219689 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.21□□□□□ -2.22
USP31-201ENST00000219689 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
USP31-201ENST00000219689 KRTAP5-7Q6L8G8 165 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms