RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 KRTAP19-3Q7Z4W3 81 aa4.83□□□□□ -1.64
NDFIP2-201ENST00000218652 MT1LQ93083 61 aa4.81□□□□□ -1.64
NDFIP2-201ENST00000218652 FLGP20930 4061 aaPredicted RBP4.79□□□□□ -1.64
NDFIP2-201ENST00000218652 MT1EP04732 61 aa4.74□□□□□ -1.65
NDFIP2-201ENST00000218652 USH2AO75445 5202 aa4.63□□□□□ -1.67
NDFIP2-201ENST00000218652 LOC100996750A0A140TA64 210 aa4.63□□□□□ -1.67
NDFIP2-201ENST00000218652 PRM1P04553 51 aa4.63□□□□□ -1.67
NDFIP2-201ENST00000218652 LCE2DQ5TA82 110 aaPredicted RBP4.63□□□□□ -1.67
NDFIP2-201ENST00000218652 MT1MQ8N339 61 aa4.61□□□□□ -1.67
NDFIP2-201ENST00000218652 KRTAP4-3Q9BYR4 195 aa4.6□□□□□ -1.67
NDFIP2-201ENST00000218652 MT3P25713 68 aa4.59□□□□□ -1.68
NDFIP2-201ENST00000218652 DSTQ03001 7570 aaKnown RBP4.54□□□□□ -1.68
NDFIP2-201ENST00000218652 MT4P47944 62 aa4.52□□□□□ -1.69
NDFIP2-201ENST00000218652 KRTAP2-3P0C7H8 128 aa4.5□□□□□ -1.69
NDFIP2-201ENST00000218652 KRTAP2-4Q9BYR9 128 aa4.5□□□□□ -1.69
NDFIP2-201ENST00000218652 KRTAP2-1Q9BYU5 128 aa4.5□□□□□ -1.69
NDFIP2-201ENST00000218652 LCE1BQ5T7P3 118 aa4.49□□□□□ -1.69
NDFIP2-201ENST00000218652 FCGBPQ9Y6R7 5405 aaPredicted RBP4.48□□□□□ -1.69
NDFIP2-201ENST00000218652 MACF1Q9UPN3 7388 aaKnown RBP4.47□□□□□ -1.69
NDFIP2-201ENST00000218652 LCE1DQ5T752 114 aa4.45□□□□□ -1.7
NDFIP2-201ENST00000218652 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
NDFIP2-201ENST00000218652 KRTAP4-9Q9BYQ8 210 aa4.41□□□□□ -1.7
NDFIP2-201ENST00000218652 KRTAP19-7Q3SYF9 63 aa4.41□□□□□ -1.7
NDFIP2-201ENST00000218652 SYNE2Q8WXH0 6885 aaKnown RBP4.4□□□□□ -1.71
NDFIP2-201ENST00000218652 KRTAP19-6Q3LI70 58 aa4.39□□□□□ -1.71
NDFIP2-201ENST00000218652 KMT2DO14686 5537 aa4.39□□□□□ -1.71
NDFIP2-201ENST00000218652 MUC19Q7Z5P9 8384 aa4.36□□□□□ -1.71
NDFIP2-201ENST00000218652 MT1AP04731 61 aa4.28□□□□□ -1.72
NDFIP2-201ENST00000218652 KRTAP9-2Q9BYQ4 174 aa4.24□□□□□ -1.73
NDFIP2-201ENST00000218652 LCE2AQ5TA79 106 aaPredicted RBP4.15□□□□□ -1.74
NDFIP2-201ENST00000218652 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
NDFIP2-201ENST00000218652 KRTAP6-1Q3LI64 71 aa4.07□□□□□ -1.76
NDFIP2-201ENST00000218652 SSPOA2VEC9 5147 aa4.05□□□□□ -1.76
NDFIP2-201ENST00000218652 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
NDFIP2-201ENST00000218652 MUC12Q9UKN1 5478 aa3.98□□□□□ -1.77
NDFIP2-201ENST00000218652 KRTAP9-7A8MTY7 169 aa3.94□□□□□ -1.78
NDFIP2-201ENST00000218652 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
NDFIP2-201ENST00000218652 KRTAP9-6A0A140TA67 174 aa3.91□□□□□ -1.78
NDFIP2-201ENST00000218652 KRTAP9-4Q9BYQ2 154 aa3.89□□□□□ -1.79
NDFIP2-201ENST00000218652 MDN1Q9NU22 5596 aa3.84□□□□□ -1.79
NDFIP2-201ENST00000218652 KRTAP20-1Q3LI63 56 aa3.8□□□□□ -1.8
NDFIP2-201ENST00000218652 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
NDFIP2-201ENST00000218652 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
NDFIP2-201ENST00000218652 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
NDFIP2-201ENST00000218652 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
NDFIP2-201ENST00000218652 KRTAP6-3Q3LI67 103 aa3.75□□□□□ -1.81
NDFIP2-201ENST00000218652 GPR98Q8WXG9 6306 aa3.69□□□□□ -1.82
NDFIP2-201ENST00000218652 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
NDFIP2-201ENST00000218652 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.64□□□□□ -1.83
NDFIP2-201ENST00000218652 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
NDFIP2-201ENST00000218652 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
NDFIP2-201ENST00000218652 NEBP20929 6669 aa3.42□□□□□ -1.86
NDFIP2-201ENST00000218652 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
NDFIP2-201ENST00000218652 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
NDFIP2-201ENST00000218652 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
NDFIP2-201ENST00000218652 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
NDFIP2-201ENST00000218652 KRTAP20-2Q3LI61 65 aa3.17□□□□□ -1.9
NDFIP2-201ENST00000218652 MUC5ACP98088 5654 aa3.15□□□□□ -1.9
NDFIP2-201ENST00000218652 HMCN1Q96RW7 5635 aa3.14□□□□□ -1.91
NDFIP2-201ENST00000218652 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
NDFIP2-201ENST00000218652 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
NDFIP2-201ENST00000218652 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
NDFIP2-201ENST00000218652 KRTAP5-4Q6L8H1 288 aa2.76□□□□□ -1.97
NDFIP2-201ENST00000218652 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
NDFIP2-201ENST00000218652 KRTAP5-3Q6L8H2 238 aa2.54□□□□□ -2
NDFIP2-201ENST00000218652 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
NDFIP2-201ENST00000218652 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
NDFIP2-201ENST00000218652 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
NDFIP2-201ENST00000218652 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
NDFIP2-201ENST00000218652 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
NDFIP2-201ENST00000218652 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
NDFIP2-201ENST00000218652 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
NDFIP2-201ENST00000218652 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
NDFIP2-201ENST00000218652 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
NDFIP2-201ENST00000218652 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
NDFIP2-201ENST00000218652 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
NDFIP2-201ENST00000218652 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 142.2 ms