RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 KRTAP2-3P0C7H8 128 aa1.14□□□□□ -2.23
NEB-201ENST00000172853 KRTAP2-4Q9BYR9 128 aa1.14□□□□□ -2.23
NEB-201ENST00000172853 SYNE2Q8WXH0 6885 aaKnown RBP1.14□□□□□ -2.23
NEB-201ENST00000172853 KRTAP19-3Q7Z4W3 81 aa1.13□□□□□ -2.23
NEB-201ENST00000172853 KRTAP19-6Q3LI70 58 aa1.12□□□□□ -2.23
NEB-201ENST00000172853 LCE1CQ5T751 118 aa1.12□□□□□ -2.23
NEB-201ENST00000172853 LCE1EQ5T753 118 aa1.12□□□□□ -2.23
NEB-201ENST00000172853 LCE1FQ5T754 118 aa1.12□□□□□ -2.23
NEB-201ENST00000172853 LCE1AQ5T7P2 110 aa1.12□□□□□ -2.23
NEB-201ENST00000172853 KRTAP4-7Q9BYR0 210 aa1.11□□□□□ -2.23
NEB-201ENST00000172853 MT1LQ93083 61 aa1.1□□□□□ -2.23
NEB-201ENST00000172853 FSIP2Q5CZC0 6907 aa1.08□□□□□ -2.24
NEB-201ENST00000172853 DSTQ03001 7570 aaKnown RBP1.08□□□□□ -2.24
NEB-201ENST00000172853 MUC12Q9UKN1 5478 aa1.08□□□□□ -2.24
NEB-201ENST00000172853 KRTAP2-2Q9BYT5 123 aa1.07□□□□□ -2.24
NEB-201ENST00000172853 KRTAP2-1Q9BYU5 128 aa1.07□□□□□ -2.24
NEB-201ENST00000172853 LPAP08519 4548 aa1.07□□□□□ -2.24
NEB-201ENST00000172853 KRTAP9-9Q9BYP9 154 aa1.07□□□□□ -2.24
NEB-201ENST00000172853 KRTAP4-9Q9BYQ8 210 aa1.07□□□□□ -2.24
NEB-201ENST00000172853 LCE2AQ5TA79 106 aaPredicted RBP1.07□□□□□ -2.24
NEB-201ENST00000172853 MT1XP80297 61 aa1.07□□□□□ -2.24
NEB-201ENST00000172853 KRTAP6-3Q3LI67 103 aa1.06□□□□□ -2.24
NEB-201ENST00000172853 MDN1Q9NU22 5596 aa1.06□□□□□ -2.24
NEB-201ENST00000172853 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.06□□□□□ -2.24
NEB-201ENST00000172853 LCE4AQ5TA78 99 aa1.06□□□□□ -2.24
NEB-201ENST00000172853 KRTAP19-2Q3LHN2 52 aa1.06□□□□□ -2.24
NEB-201ENST00000172853 KMT2DO14686 5537 aa1.06□□□□□ -2.24
NEB-201ENST00000172853 MT1BP07438 61 aa1.05□□□□□ -2.24
NEB-201ENST00000172853 PRM1P04553 51 aa1.05□□□□□ -2.24
NEB-201ENST00000172853 SSPOA2VEC9 5147 aa1.04□□□□□ -2.24
NEB-201ENST00000172853 KRTAP4-8A0A0G2JLE6 195 aa1.04□□□□□ -2.24
NEB-201ENST00000172853 KRTAP4-8Q9BYQ9 185 aa1.04□□□□□ -2.24
NEB-201ENST00000172853 LOC100996750A0A140TA64 210 aa1.04□□□□□ -2.24
NEB-201ENST00000172853 MT1MQ8N339 61 aa1.04□□□□□ -2.24
NEB-201ENST00000172853 MT1EP04732 61 aa1.03□□□□□ -2.24
NEB-201ENST00000172853 USH2AO75445 5202 aa1.03□□□□□ -2.25
NEB-201ENST00000172853 KRTAP4-3Q9BYR4 195 aa1.02□□□□□ -2.25
NEB-201ENST00000172853 MUC2Q02817 5179 aa1.02□□□□□ -2.25
NEB-201ENST00000172853 KRTAP9-8Q9BYQ0 159 aa1.02□□□□□ -2.25
NEB-201ENST00000172853 KRTAP9-6A8MVA2 160 aa1.01□□□□□ -2.25
NEB-201ENST00000172853 KRTAP9-3Q9BYQ3 159 aa1.01□□□□□ -2.25
NEB-201ENST00000172853 OBSCNQ5VST9 7968 aa0.99□□□□□ -2.25
NEB-201ENST00000172853 MT1AP04731 61 aa0.99□□□□□ -2.25
NEB-201ENST00000172853 AHNAKQ09666 5890 aaKnown RBP0.98□□□□□ -2.25
NEB-201ENST00000172853 AHNAK2Q8IVF2 5795 aa0.97□□□□□ -2.25
NEB-201ENST00000172853 SYNE1Q8NF91 8797 aaKnown RBP0.95□□□□□ -2.26
NEB-201ENST00000172853 MACF1Q9UPN3 7388 aaKnown RBP0.94□□□□□ -2.26
NEB-201ENST00000172853 KRTAP9-4Q9BYQ2 154 aa0.94□□□□□ -2.26
NEB-201ENST00000172853 FCGBPQ9Y6R7 5405 aaPredicted RBP0.94□□□□□ -2.26
NEB-201ENST00000172853 HMCN1Q96RW7 5635 aa0.92□□□□□ -2.26
NEB-201ENST00000172853 KRTAP19-7Q3SYF9 63 aa0.9□□□□□ -2.26
NEB-201ENST00000172853 KRTAP20-2Q3LI61 65 aa0.89□□□□□ -2.27
NEB-201ENST00000172853 KRTAP6-2Q3LI66 62 aa0.89□□□□□ -2.27
NEB-201ENST00000172853 MUC5BQ9HC84 5762 aaPredicted RBP0.88□□□□□ -2.27
NEB-201ENST00000172853 KRTAP4-11Q9BYQ6 195 aa0.84□□□□□ -2.28
NEB-201ENST00000172853 KRTAP6-1Q3LI64 71 aa0.84□□□□□ -2.28
NEB-201ENST00000172853 KRTAP4-2Q9BYR5 136 aa0.83□□□□□ -2.28
NEB-201ENST00000172853 KRTAP5-5Q701N2 237 aaPredicted RBP0.82□□□□□ -2.28
NEB-201ENST00000172853 KRTAP5-9P26371 169 aa0.78□□□□□ -2.28
NEB-201ENST00000172853 KRTAP4-6Q9BYQ5 205 aa0.74□□□□□ -2.29
NEB-201ENST00000172853 KRTAP4-4Q9BYR3 166 aa0.74□□□□□ -2.29
NEB-201ENST00000172853 KRTAP5-4Q6L8H1 288 aa0.74□□□□□ -2.29
NEB-201ENST00000172853 PHGR1C9JFL3 82 aa0.73□□□□□ -2.29
NEB-201ENST00000172853 KRTAP4-12Q9BQ66 201 aa0.72□□□□□ -2.29
NEB-201ENST00000172853 MUC5ACP98088 5654 aa0.72□□□□□ -2.29
NEB-201ENST00000172853 KRTAP5-3Q6L8H2 238 aa0.69□□□□□ -2.3
NEB-201ENST00000172853 MUC19Q7Z5P9 8384 aa0.67□□□□□ -2.3
NEB-201ENST00000172853 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
NEB-201ENST00000172853 KRTAP5-2Q701N4 177 aa0.62□□□□□ -2.31
NEB-201ENST00000172853 KRTAP5-7Q6L8G8 165 aa0.58□□□□□ -2.32
NEB-201ENST00000172853 KRTAP5-8O75690 187 aa0.58□□□□□ -2.32
NEB-201ENST00000172853 KRTAP5-10Q6L8G5 202 aa0.55□□□□□ -2.32
NEB-201ENST00000172853 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
NEB-201ENST00000172853 KRTAP21-2Q3LI59 83 aa0.5□□□□□ -2.33
NEB-201ENST00000172853 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.48□□□□□ -2.33
NEB-201ENST00000172853 KRTAP5-11Q6L8G4 156 aa0.48□□□□□ -2.33
NEB-201ENST00000172853 KRTAP5-1Q6L8H4 278 aa0.47□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 57.6 ms