RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 MUC2Q02817 5179 aa3.65□□□□□ -1.82
RGPD5-201ENST00000016946 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
RGPD5-201ENST00000016946 KRTAP4-7Q9BYR0 210 aa3.61□□□□□ -1.83
RGPD5-201ENST00000016946 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
RGPD5-201ENST00000016946 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.84
RGPD5-201ENST00000016946 MT1MQ8N339 61 aa3.57□□□□□ -1.84
RGPD5-201ENST00000016946 SYNE2Q8WXH0 6885 aaKnown RBP3.57□□□□□ -1.84
RGPD5-201ENST00000016946 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
RGPD5-201ENST00000016946 FLGP20930 4061 aaPredicted RBP3.53□□□□□ -1.84
RGPD5-201ENST00000016946 MT4P47944 62 aa3.5□□□□□ -1.85
RGPD5-201ENST00000016946 TNXBP22105 4242 aa3.48□□□□□ -1.85
RGPD5-201ENST00000016946 MT3P25713 68 aa3.47□□□□□ -1.85
RGPD5-201ENST00000016946 KRTAP19-7Q3SYF9 63 aa3.42□□□□□ -1.86
RGPD5-201ENST00000016946 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
RGPD5-201ENST00000016946 KRTAP9-7A8MTY7 169 aa3.41□□□□□ -1.86
RGPD5-201ENST00000016946 LOC100996750A0A140TA64 210 aa3.38□□□□□ -1.87
RGPD5-201ENST00000016946 USH2AO75445 5202 aa3.37□□□□□ -1.87
RGPD5-201ENST00000016946 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
RGPD5-201ENST00000016946 KRTAP20-1Q3LI63 56 aa3.36□□□□□ -1.87
RGPD5-201ENST00000016946 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
RGPD5-201ENST00000016946 MT1AP04731 61 aa3.32□□□□□ -1.88
RGPD5-201ENST00000016946 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
RGPD5-201ENST00000016946 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.29□□□□□ -1.88
RGPD5-201ENST00000016946 LCE1DQ5T752 114 aa3.27□□□□□ -1.89
RGPD5-201ENST00000016946 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
RGPD5-201ENST00000016946 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
RGPD5-201ENST00000016946 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
RGPD5-201ENST00000016946 KMT2DO14686 5537 aa3.19□□□□□ -1.9
RGPD5-201ENST00000016946 KRTAP2-1Q9BYU5 128 aa3.17□□□□□ -1.9
RGPD5-201ENST00000016946 LCE5AQ5TCM9 118 aa3.16□□□□□ -1.9
RGPD5-201ENST00000016946 MACF1Q9UPN3 7388 aaKnown RBP3.15□□□□□ -1.9
RGPD5-201ENST00000016946 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.9
RGPD5-201ENST00000016946 FCGBPQ9Y6R7 5405 aaPredicted RBP3.14□□□□□ -1.91
RGPD5-201ENST00000016946 PRM1P04553 51 aa3.12□□□□□ -1.91
RGPD5-201ENST00000016946 LCE4AQ5TA78 99 aa3.12□□□□□ -1.91
RGPD5-201ENST00000016946 DSTQ03001 7570 aaKnown RBP3.11□□□□□ -1.91
RGPD5-201ENST00000016946 NEBP20929 6669 aa3.1□□□□□ -1.91
RGPD5-201ENST00000016946 SSPOA2VEC9 5147 aa3.09□□□□□ -1.91
RGPD5-201ENST00000016946 KRTAP4-9Q9BYQ8 210 aa3.09□□□□□ -1.92
RGPD5-201ENST00000016946 MDN1Q9NU22 5596 aa3.08□□□□□ -1.92
RGPD5-201ENST00000016946 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
RGPD5-201ENST00000016946 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
RGPD5-201ENST00000016946 KRTAP9-4Q9BYQ2 154 aa3.03□□□□□ -1.92
RGPD5-201ENST00000016946 KRTAP9-6A8MVA2 160 aa3.01□□□□□ -1.93
RGPD5-201ENST00000016946 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
RGPD5-201ENST00000016946 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
RGPD5-201ENST00000016946 MUC12Q9UKN1 5478 aa2.85□□□□□ -1.95
RGPD5-201ENST00000016946 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.97
RGPD5-201ENST00000016946 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
RGPD5-201ENST00000016946 LCE1EQ5T753 118 aa2.77□□□□□ -1.97
RGPD5-201ENST00000016946 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
RGPD5-201ENST00000016946 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
RGPD5-201ENST00000016946 KRTAP4-6Q9BYQ5 205 aa2.66□□□□□ -1.98
RGPD5-201ENST00000016946 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
RGPD5-201ENST00000016946 AHNAK2Q8IVF2 5795 aa2.54□□□□□ -2
RGPD5-201ENST00000016946 KRTAP5-4Q6L8H1 288 aa2.46□□□□□ -2.02
RGPD5-201ENST00000016946 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
RGPD5-201ENST00000016946 KRTAP4-11Q9BYQ6 195 aa2.4□□□□□ -2.03
RGPD5-201ENST00000016946 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
RGPD5-201ENST00000016946 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
RGPD5-201ENST00000016946 KRTAP4-12Q9BQ66 201 aa2.3□□□□□ -2.04
RGPD5-201ENST00000016946 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
RGPD5-201ENST00000016946 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
RGPD5-201ENST00000016946 KRTAP5-3Q6L8H2 238 aa2.24□□□□□ -2.05
RGPD5-201ENST00000016946 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
RGPD5-201ENST00000016946 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
RGPD5-201ENST00000016946 KRTAP5-2Q701N4 177 aa1.94□□□□□ -2.1
RGPD5-201ENST00000016946 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
RGPD5-201ENST00000016946 KRTAP5-10Q6L8G5 202 aa1.81□□□□□ -2.12
RGPD5-201ENST00000016946 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
RGPD5-201ENST00000016946 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
RGPD5-201ENST00000016946 KRTAP5-1Q6L8H4 278 aa1.72□□□□□ -2.13
RGPD5-201ENST00000016946 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
RGPD5-201ENST00000016946 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
RGPD5-201ENST00000016946 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.53□□□□□ -2.17
RGPD5-201ENST00000016946 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
RGPD5-201ENST00000016946 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 72.8 ms