RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 RhohQ9D3G9 191 aa15.8■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Nit2Q9JHW2 276 aa15.8■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Gm94Q3V2D2 93 aa15.8■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Nhlrc1Q8BR37 401 aa15.8■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Adcyap1O70176 175 aa15.79■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Vsig8Q6P3A4 417 aa15.79■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Crip3Q6Q6R3 243 aa15.79■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Spink2Q8BMY7 86 aa15.79■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Rab4bQ91ZR1 213 aa15.79■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Gm9047B9EJX3 177 aa15.78■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Atp5iQ06185 71 aaKnown RBP15.78■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 H1fxQ80ZM5 188 aa15.78■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 A830031A19RikQ8BNT5 113 aa15.78■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Olfr984Q8VFN1 314 aa15.78■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 LhbO09108 141 aa15.77■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Olfr312Q7TRZ9 308 aa15.77■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Ube2tQ9CQ37 204 aa15.77■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 PerpQ9JK95 193 aa15.77■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Ube2l6Q9QZU9 153 aa15.77■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 1810032O08RikE9PZV8 113 aa15.77■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 SnrpeP62305 92 aaKnown RBP15.77■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Olfr365Q8VFT2 312 aa15.77■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Npc2Q9Z0J0 149 aa15.77■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Olfr311Q5NC59 308 aa15.76■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Aqp11Q8BHH1 271 aa15.76■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 TctaQ8VEA7 122 aa15.76■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 MNCb-2875Q9DCB3 74 aa15.76■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Trav19A0A0B4J1K4 119 aa15.75■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 TcapO70548 167 aa15.75■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Sap30O88574 220 aa15.75■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Slc16a4Q8R0M8 500 aa15.75■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Trav14d-1A0A075B6B1 121 aa15.74■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Q8CF25 301 aa15.74■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Q9CR34 168 aa15.74■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Cml3Q9JIY8 226 aa15.74■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Ighv1-23A0A0A6YVW3 117 aa15.74■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Vmn1r119E9Q4H3 307 aa15.74■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Gm4133K9J7G6 307 aa15.74■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Gpr82Q8BZR0 328 aa15.74■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Smim10l1A0A087WNQ7 89 aa15.73■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Trav12d-3A0A075B6A4 115 aa15.72■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Gm7075D3Z497 112 aa15.72■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Scgb2a2J3KMP9 96 aa15.72■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 SriQ6P069 198 aa15.72■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 4930564D02RikQ9D4S4 103 aa15.72■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Gm5218F6YH22 154 aa15.71■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Gtsf1lQ9CWD0 151 aa15.71■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Wfdc2Q9DAU7 174 aa15.71■□□□□ 0.11
Ccdc88a-202ENSMUST00000109477 Igkv4-62A0A0G2JDW9 117 aa15.71■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Gm6176J3QK59 301 aa15.71■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Gm4567Q3UTA8 301 aa15.71■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Ndufa4l2Q4FZG9 87 aa15.71■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Olfr1431Q8VF59 312 aa15.71■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Ifitm2Q99J93 144 aa15.71■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Ndufb4Q9CQC7 129 aa15.71■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Tmem160Q9D938 188 aa15.7■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Rbmxl2Q9DAE2 385 aaKnown RBP15.7■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Thy1P01831 162 aa15.69■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Cdx4Q07424 282 aa15.69■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Klk15Q8CGR4 254 aa15.69■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Hcfc2Q9D968 241 aa15.69■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Zfp930A0A1D5RM15 441 aa15.68■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 9130204L05RikG3UWB8 92 aa15.68■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Fam110dQ80X91 271 aa15.68■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Rabac1Q9Z0S9 185 aa15.68■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Hspg2Q05793 3707 aaKnown RBP15.68■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Ighv1-75A0A075B5Y2 117 aa15.68■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Ly6c2P0CW03 131 aa15.68■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Tmem241Q3UME2 297 aa15.68■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 SnrpcQ62241 159 aa15.68■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Megf10Q6DIB5 1147 aa15.68■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Mapk1ip1Q9D7G9 263 aa15.68■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Ighv3-3A0A0A6YWL2 116 aa15.67■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Gm12845A0A0N4SUM5 588 aa15.67■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Psmg4P0C7N9 123 aa15.67■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Arl14eplQ3UKZ7 152 aa15.67■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 7420426K07RikQ3UX66 186 aa15.67■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Mrpl20Q9CQL4 149 aa15.67■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Gm9602J3QPD5 205 aa15.66■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Hoxa5P09021 270 aa15.66■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Timm8bP62077 83 aaKnown RBP15.66■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Gm11733Q8BQP1 125 aa15.66■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Ly6g5bQ8K1T4 194 aa15.66■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Borcs7Q9CRC6 105 aa15.66■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Ighv1-63A0A075B5X2 117 aa15.65■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Gm20379A0A087WR34 119 aa15.65■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Gm9944Q8C559 102 aa15.65■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Fmc1Q9CR13 113 aa15.65■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Gm29666A0A087WQ99 126 aa15.65■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Gm36176A0A1W2P8D5 158 aa15.65■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Khdc1aQ3UWR2 166 aa15.65■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 CnfnQ6PCW6 111 aa15.65■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Olfr983Q8VG90 315 aa15.65■□□□□ 0.1
Ccdc88a-202ENSMUST00000109477 Olfr1191-ps1A0A1L1STD5 311 aa15.64■□□□□ 0.09
Ccdc88a-202ENSMUST00000109477 4930447F04RikA2AFR2 126 aa15.64■□□□□ 0.09
Ccdc88a-202ENSMUST00000109477 Il19Q8CJ70 176 aa15.64■□□□□ 0.09
Ccdc88a-202ENSMUST00000109477 Arhgap32Q811P8 2089 aa15.64■□□□□ 0.09
Ccdc88a-202ENSMUST00000109477 Synj2bpQ9D6K5 145 aa15.63■□□□□ 0.09
Ccdc88a-202ENSMUST00000109477 Brwd1Q921C3 2304 aa15.63■□□□□ 0.09
Ccdc88a-202ENSMUST00000109477 Srrm2Q8BTI8 2703 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms