RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 Cep295Q8BQ48 2412 aa4.46□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Ighv7-3A0A075B5R2 120 aa4.46□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm15128A2ADW8 449 aa4.46□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Luzp4B1AV09 449 aa4.46□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm15127B1AVZ5 449 aa4.46□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm15091B1AZM2 449 aa4.46□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm15107B1B0X0 449 aa4.46□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm15097E9QA14 449 aa4.46□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 A630023A22RikJ3QP60 199 aa4.46□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 P01837 106 aa4.46□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Znf691Q3TDE8 283 aa4.46□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Foxc1Q61572 553 aa4.46□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Cysrt1Q9D1E4 142 aa4.46□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Rnf7Q9WTZ1 113 aa4.46□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Ramp3Q9WUP1 147 aa4.46□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Pcsk5Q04592 1877 aa4.46□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 A0A1L1SR50 188 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Myod1P10085 318 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Defa4P28311 92 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Defa25Q5G864 92 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Rbmy1bQ60990 380 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Olfr312Q7TRZ9 308 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm10295Q8CCF3 114 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Klk13Q8CGR6 276 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Ebi3O35228 228 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 TtrP07309 147 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Ube2d1P61080 147 aaKnown RBP4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Cdx4Q07424 282 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Khdc1cQ4KL78 166 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Olfr553Q7TRS6 326 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Lypd1Q8BLC3 141 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Rnf185Q91YT2 192 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Wdr38Q9D994 303 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Dchs2A0A0A6YW72 3346 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm42674D3YUT9 64 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Cd5P13379 494 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 P18527 97 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Psmb8P28063 276 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Mrpl33Q9CQP0 65 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Fstl3Q9EQC7 256 aa4.45□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Shisal2aA2A9G7 189 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm12830F6XVH0 157 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 P01630 113 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Q5BN45 167 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Ube2wQ8VDW4 151 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm26938S4R185 226 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Prrc2aQ7TSC1 2158 aaKnown RBP4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Ighv14-2A0A075B5R7 117 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm33815A0A087WNV3 176 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 9830107B12RikD3Z5D6 160 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Onecut1O08755 465 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gsx1P31315 261 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Pla2g2cP48076 150 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm10767Q3TQP0 103 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm6040Q4QY32 63 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Dlx1Q64317 255 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Rnf182Q8C432 247 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Rnf183Q8QZS5 190 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Ormdl2Q9CQZ0 153 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 EppinQ9DA01 134 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Zfp407G3UVV3 2246 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Smim10l1A0A087WNQ7 89 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Q08AU9 97 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Defb47Q30KN1 79 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Dmrt3Q80WT2 476 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Tmem101Q91VP7 257 aa4.44□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Ighv5-6A0A075B5Q0 117 aa4.43□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Olfr311Q5NC59 308 aa4.43□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Prima1Q810F0 153 aa4.43□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Znf672Q99LH4 468 aa4.43□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Mfap4Q9D1H9 257 aa4.43□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Trav4n-4A0A075B615 110 aa4.43□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Dynlrb1P62627 96 aa4.43□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Tcf15Q60756 195 aa4.43□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Prss58Q8BW11 241 aa4.43□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Col6a3E9PWQ3 3284 aa4.43□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Flg2Q2VIS4 2362 aa4.43□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Trav19A0A0B4J1K4 119 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm35549A0A0N4SUS7 141 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm26661M0QWV4 156 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Ly6c1P0CW02 131 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Rpl32-psP17932 135 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Pde6hP61249 83 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Defb45Q3V490 66 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Zfp248Q640N4 576 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 RflnaQ7TS73 204 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Gm10118Q8C8J5 116 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Rasl11bQ922H7 247 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Triap1Q9D8Z2 76 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Mettl26Q9DCS2 204 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Snai3Q9QY31 287 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Ighv1-7A0A075B5T7 117 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Apoc4Q61268 124 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 GalmQ8K157 342 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Parm1Q923D3 296 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Arpc1aQ9R0Q6 370 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Timm23Q9WTQ8 209 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Prune2Q52KR3 3084 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 P01812 117 aa4.42□□□□□ -1.7
Rc3h1-201ENSMUST00000035911 Ighv3-6P18531 116 aa4.42□□□□□ -1.7
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms