RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Igkv4-74A0A0B4J1I3 119 aa11.69□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Rbm3O89086 153 aaKnown RBP11.69□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Dcaf12l1Q8CBW4 501 aa11.69□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Pcsk5Q04592 1877 aa11.69□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Wdr90Q6ZPG2 1874 aa11.69□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Spink8Q09TK9 105 aa11.69□□□□□ -0.54
Col7a1-201ENSMUST00000026740 4931422A03RikA2BHN9 113 aa11.69□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Ear14F6YUX7 155 aa11.69□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Wipf3P0C7L0 485 aa11.69□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Asphd1Q2TA57 360 aa11.69□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Ndufa4Q62425 82 aaKnown RBP11.69□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Igkv6-23A0A140T8N5 115 aa11.68□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Minos1Q7TNS2 76 aa11.68□□□□□ -0.54
Col7a1-201ENSMUST00000026740 9430097D07RikQ8BS47 195 aa11.68□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Fam241bQ9D882 120 aa11.68□□□□□ -0.54
Col7a1-201ENSMUST00000026740 C1qtnf5Q8K479 243 aa11.68□□□□□ -0.54
Col7a1-201ENSMUST00000026740 COA4Q8BT51 87 aa11.68□□□□□ -0.54
Col7a1-201ENSMUST00000026740 1700001C19RikQ8K168 210 aa11.68□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Shisa3Q3UPR0 238 aa11.68□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Wbp1P97764 304 aa11.68□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Ube2e1P52482 193 aa11.68□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Wisp1O54775 367 aa11.67□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Cdkn2aQ64364 169 aa11.67□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Id3P41133 119 aa11.67□□□□□ -0.54
Col7a1-201ENSMUST00000026740 A530064D06RikQ8BNV8 229 aa11.67□□□□□ -0.54
Col7a1-201ENSMUST00000026740 GlrxQ9QUH0 107 aa11.67□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Gm43517E9PYS1 339 aa11.67□□□□□ -0.54
Col7a1-201ENSMUST00000026740 GfyJ3KML8 504 aa11.67□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Gm5105Q8C6Y9 112 aa11.67□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Gm4763Q8CFJ5 196 aa11.67□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Trbv31A0A075B5J5 111 aa11.67□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Trav14n-2A0A0G2JDF5 121 aa11.67□□□□□ -0.54
Col7a1-201ENSMUST00000026740 PcolceQ61398 468 aa11.67□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Trav4-3A0A0B4J1K1 110 aa11.66□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Tmem200bD3Z0P8 284 aa11.66□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Erdr1J3QMM0 206 aa11.66□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Pglyrp1O88593 182 aa11.66□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Gm20499D3Z4G5 72 aa11.66□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Ighv1-69A0A0G2JFS5 117 aa11.66□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Cpsf4lE9Q2N0 280 aa11.66□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Zfp462B1AWL2 2495 aaKnown RBP11.66□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Sox16Q62247 57 aa11.66□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Ighv3-8A0A075B5T0 131 aa11.66□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Gm15080A2BI02 449 aa11.66□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Zc2hc1bQ9D534 172 aa11.66□□□□□ -0.54
Col7a1-201ENSMUST00000026740 P01756 117 aa11.65□□□□□ -0.54
Col7a1-201ENSMUST00000026740 P01757 117 aa11.65□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Gm10306Q9CUK2 115 aa11.65□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Igkv20-101-2A0A0G2JDU3 113 aa11.65□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Tmem243B2RVB9 118 aa11.65□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Zfp11P10751 647 aa11.65□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Igkv4-57A0A0A6YYE7 117 aa11.65□□□□□ -0.54
Col7a1-201ENSMUST00000026740 P04946 108 aa11.65□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Sp5Q9JHX2 398 aa11.65□□□□□ -0.54
Col7a1-201ENSMUST00000026740 Ighv1-36A0A0A6YXT2 117 aa11.65□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Rspo3Q2TJ95 277 aa11.65□□□□□ -0.55
Col7a1-201ENSMUST00000026740 CtsgP28293 261 aa11.64□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Cox6a1P43024 111 aa11.64□□□□□ -0.55
Col7a1-201ENSMUST00000026740 CrygbP04344 175 aa11.64□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Ighv8-6A0A0A6YXA3 118 aa11.64□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Polr3kQ9CQZ7 108 aa11.64□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Pth2Q91W27 100 aa11.64□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Card19Q9D1I2 183 aa11.64□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Ighv3-4A0A0A6YXF1 117 aa11.63□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Rpp25lQ99JH1 163 aa11.63□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Dpm3Q9D1Q4 92 aa11.63□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Trav14-2A0A075B694 121 aa11.63□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Ccl17F6R5P4 103 aa11.63□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Klhdc3Q8VEM9 382 aa11.63□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Igkv19-93A0A0G2JFZ3 115 aa11.63□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Smr2O09133 150 aa11.63□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Wipf2Q6PEV3 440 aa11.63□□□□□ -0.55
Col7a1-201ENSMUST00000026740 RtbdnQ8QZY4 247 aa11.63□□□□□ -0.55
Col7a1-201ENSMUST00000026740 ArtnQ9Z0L2 224 aa11.63□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Gata1P17679 413 aa11.63□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Defb6Q91VD6 63 aa11.63□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Smim20D3Z7Q2 69 aa11.63□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Znf664Q4VA44 261 aa11.62□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Tmem256Q5F285 113 aa11.62□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Sec61gP60060 68 aa11.62□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Pfn2Q9JJV2 140 aa11.62□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Adamts20P59511 1906 aa11.62□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Gm9936Q8C864 160 aa11.62□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Lynx1P0DP60 116 aa11.62□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Gm815Q3UWS2 115 aa11.62□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Igkv13-85A0A075B666 115 aa11.61□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Ccl25O35903 144 aa11.61□□□□□ -0.55
Col7a1-201ENSMUST00000026740 P01837 106 aa11.61□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Prop1P97458 223 aa11.61□□□□□ -0.55
Col7a1-201ENSMUST00000026740 SostQ99P68 211 aa11.61□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Tmem14cQ9CQN6 114 aa11.61□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Myo9aQ8C170 2542 aa11.61□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Igkv8-26A0A075B5N5 123 aa11.61□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Fam24aQ8CF27 98 aa11.61□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Pmaip1Q9JM54 103 aa11.61□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Kiaa1549Q68FD9 1940 aa11.61□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Atp5eP56382 52 aa11.61□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Trav4d-3A0A075B625 110 aa11.61□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Atp5g3P56384 141 aa11.6□□□□□ -0.55
Col7a1-201ENSMUST00000026740 Ube2e2Q91W82 201 aa11.6□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 91.7 ms