RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 DMAC1Q96GE9 116 aa8.63□□□□□ -1.03
PHGDH-230ENST00000641927 MT1HP80294 61 aa8.6□□□□□ -1.03
PHGDH-230ENST00000641927 FLGP20930 4061 aaPredicted RBP8.6□□□□□ -1.03
PHGDH-230ENST00000641927 S4R3F8 94 aa8.58□□□□□ -1.04
PHGDH-230ENST00000641927 M0R2T5 61 aa8.57□□□□□ -1.04
PHGDH-230ENST00000641927 ACYP2P14621 99 aa8.57□□□□□ -1.04
PHGDH-230ENST00000641927 LCA10Q71F78 164 aa8.53□□□□□ -1.04
PHGDH-230ENST00000641927 COA5Q86WW8 74 aa8.51□□□□□ -1.05
PHGDH-230ENST00000641927 CHKB-CPT1BH3BT56 60 aa8.46□□□□□ -1.05
PHGDH-230ENST00000641927 LCE2AQ5TA79 106 aaPredicted RBP8.46□□□□□ -1.05
PHGDH-230ENST00000641927 CSAG1Q6PB30 78 aa8.43□□□□□ -1.06
PHGDH-230ENST00000641927 KRTAP3-3Q9BYR6 98 aa8.43□□□□□ -1.06
PHGDH-230ENST00000641927 PRO0628Q9UI54 55 aa8.43□□□□□ -1.06
PHGDH-230ENST00000641927 Q1T7F1 81 aa8.4□□□□□ -1.07
PHGDH-230ENST00000641927 SPTSSBQ8NFR3 76 aa8.34□□□□□ -1.07
PHGDH-230ENST00000641927 KRTAP10-6P60371 365 aaPredicted RBP8.34□□□□□ -1.08
PHGDH-230ENST00000641927 BRK1Q8WUW1 75 aa8.31□□□□□ -1.08
PHGDH-230ENST00000641927 V9GYY9 64 aa8.31□□□□□ -1.08
PHGDH-230ENST00000641927 LORP23490 312 aaPredicted RBP8.28□□□□□ -1.08
PHGDH-230ENST00000641927 KRTAP9-8Q9BYQ0 159 aa8.21□□□□□ -1.09
PHGDH-230ENST00000641927 PSPHP1O15172 72 aa8.21□□□□□ -1.1
PHGDH-230ENST00000641927 MT2AP02795 61 aa8.18□□□□□ -1.1
PHGDH-230ENST00000641927 LINC01558Q9Y6Z2 57 aa8.18□□□□□ -1.1
PHGDH-230ENST00000641927 Q5VV11 94 aa8.16□□□□□ -1.1
PHGDH-230ENST00000641927 ADM2Q7Z4H4 148 aa8.16□□□□□ -1.1
PHGDH-230ENST00000641927 H0YAA0 97 aa8.14□□□□□ -1.11
PHGDH-230ENST00000641927 KRTAP10-10P60014 251 aa8.14□□□□□ -1.11
PHGDH-230ENST00000641927 MT1FP04733 61 aa8.12□□□□□ -1.11
PHGDH-230ENST00000641927 PRR15LQ9BU68 103 aa8.11□□□□□ -1.11
PHGDH-230ENST00000641927 A0A1B0GU69 56 aa8.06□□□□□ -1.12
PHGDH-230ENST00000641927 SEC61GP60059 68 aa8.06□□□□□ -1.12
PHGDH-230ENST00000641927 P0C880 135 aa8.05□□□□□ -1.12
PHGDH-230ENST00000641927 KRTAP3-2Q9BYR7 98 aa8.04□□□□□ -1.12
PHGDH-230ENST00000641927 A6NED7 52 aa7.95□□□□□ -1.14
PHGDH-230ENST00000641927 CRIPTQ9P021 101 aa7.94□□□□□ -1.14
PHGDH-230ENST00000641927 A8MU10 97 aa7.93□□□□□ -1.14
PHGDH-230ENST00000641927 KRTAP9-3Q9BYQ3 159 aa7.93□□□□□ -1.14
PHGDH-230ENST00000641927 CDC42SE1Q9NRR8 79 aa7.92□□□□□ -1.14
PHGDH-230ENST00000641927 R4GN34 69 aa7.91□□□□□ -1.14
PHGDH-230ENST00000641927 M0QZ58 72 aa7.88□□□□□ -1.15
PHGDH-230ENST00000641927 PMAIP1Q13794 54 aa7.87□□□□□ -1.15
PHGDH-230ENST00000641927 A0A1B0GU33 70 aa7.84□□□□□ -1.15
PHGDH-230ENST00000641927 KRTAP19-1Q8IUB9 90 aa7.84□□□□□ -1.15
PHGDH-230ENST00000641927 SPRR2GQ9BYE4 73 aa7.83□□□□□ -1.16
PHGDH-230ENST00000641927 UQCR11O14957 56 aa7.82□□□□□ -1.16
PHGDH-230ENST00000641927 LCE2DQ5TA82 110 aaPredicted RBP7.82□□□□□ -1.16
PHGDH-230ENST00000641927 LCE2BO14633 110 aa7.77□□□□□ -1.17
PHGDH-230ENST00000641927 LINC01554Q52M75 96 aa7.77□□□□□ -1.17
PHGDH-230ENST00000641927 A6NN06 94 aa7.76□□□□□ -1.17
PHGDH-230ENST00000641927 KRTAP13-4Q3LI77 160 aa7.76□□□□□ -1.17
PHGDH-230ENST00000641927 SPATA8Q6RVD6 105 aa7.74□□□□□ -1.17
PHGDH-230ENST00000641927 KRTAP9-2Q9BYQ4 174 aa7.73□□□□□ -1.17
PHGDH-230ENST00000641927 KTN1-AS1Q86SY8 53 aa7.73□□□□□ -1.17
PHGDH-230ENST00000641927 MIR22HGQ0VDD5 57 aa7.72□□□□□ -1.17
PHGDH-230ENST00000641927 KRTAP19-8Q3LI54 63 aa7.67□□□□□ -1.18
PHGDH-230ENST00000641927 USH2AO75445 5202 aa7.65□□□□□ -1.18
PHGDH-230ENST00000641927 A0A0D9SG42 100 aa7.65□□□□□ -1.18
PHGDH-230ENST00000641927 FSIP2Q5CZC0 6907 aa7.65□□□□□ -1.19
PHGDH-230ENST00000641927 MT1BP07438 61 aa7.6□□□□□ -1.19
PHGDH-230ENST00000641927 PLAC4Q8WY50 150 aa7.57□□□□□ -1.2
PHGDH-230ENST00000641927 SPINT4Q6UDR6 99 aa7.5□□□□□ -1.21
PHGDH-230ENST00000641927 SSPOA2VEC9 5147 aa7.45□□□□□ -1.22
PHGDH-230ENST00000641927 KRTAP12-1P59990 96 aa7.44□□□□□ -1.22
PHGDH-230ENST00000641927 KRTAP12-2P59991 146 aa7.42□□□□□ -1.22
PHGDH-230ENST00000641927 CRCT1Q9UGL9 99 aa7.41□□□□□ -1.22
PHGDH-230ENST00000641927 K7ERS5 55 aa7.4□□□□□ -1.23
PHGDH-230ENST00000641927 CAMK2N1Q7Z7J9 78 aa7.38□□□□□ -1.23
PHGDH-230ENST00000641927 KRTAP19-6Q3LI70 58 aa7.37□□□□□ -1.23
PHGDH-230ENST00000641927 PRAC1Q96KF2 57 aa7.33□□□□□ -1.24
PHGDH-230ENST00000641927 PRO2289Q9P1D8 64 aa7.3□□□□□ -1.24
PHGDH-230ENST00000641927 KRTAP10-5P60370 271 aa7.29□□□□□ -1.24
PHGDH-230ENST00000641927 MT1XP80297 61 aa7.28□□□□□ -1.24
PHGDH-230ENST00000641927 KRTAP9-6A0A140TA67 174 aa7.25□□□□□ -1.25
PHGDH-230ENST00000641927 FCGBPQ9Y6R7 5405 aaPredicted RBP7.22□□□□□ -1.25
PHGDH-230ENST00000641927 ROMO1P60602 79 aa7.06□□□□□ -1.28
PHGDH-230ENST00000641927 C10orf95Q9H7T3 257 aa7.06□□□□□ -1.28
PHGDH-230ENST00000641927 KRTAP25-1Q3LHN0 102 aa7□□□□□ -1.29
PHGDH-230ENST00000641927 KRTAP10-7P60409 375 aaPredicted RBP7□□□□□ -1.29
PHGDH-230ENST00000641927 MACF1Q9UPN3 7388 aaKnown RBP6.98□□□□□ -1.29
PHGDH-230ENST00000641927 TNP1P09430 55 aa6.93□□□□□ -1.3
PHGDH-230ENST00000641927 KRTAP10-12P60413 245 aa6.9□□□□□ -1.3
PHGDH-230ENST00000641927 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.86□□□□□ -1.31
PHGDH-230ENST00000641927 KMT2DO14686 5537 aa6.86□□□□□ -1.31
PHGDH-230ENST00000641927 SYNE2Q8WXH0 6885 aaKnown RBP6.83□□□□□ -1.32
PHGDH-230ENST00000641927 KRTAP4-8A0A0G2JLE6 195 aa6.81□□□□□ -1.32
PHGDH-230ENST00000641927 KRTAP4-8Q9BYQ9 185 aa6.81□□□□□ -1.32
PHGDH-230ENST00000641927 KRTAP8-1Q8IUC2 63 aa6.74□□□□□ -1.33
PHGDH-230ENST00000641927 LCE3AQ5TA76 89 aa6.69□□□□□ -1.34
PHGDH-230ENST00000641927 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
PHGDH-230ENST00000641927 KRTAP6-3Q3LI67 103 aa6.59□□□□□ -1.35
PHGDH-230ENST00000641927 KRTAP23-1A1A580 65 aa6.58□□□□□ -1.36
PHGDH-230ENST00000641927 PP632Q6XCG6 107 aa6.58□□□□□ -1.36
PHGDH-230ENST00000641927 SPRR2FQ96RM1 72 aa6.57□□□□□ -1.36
PHGDH-230ENST00000641927 KRTAP5-9P26371 169 aa6.54□□□□□ -1.36
PHGDH-230ENST00000641927 KRTAP19-5Q3LI72 72 aa6.53□□□□□ -1.36
PHGDH-230ENST00000641927 KRTAP19-7Q3SYF9 63 aa6.49□□□□□ -1.37
PHGDH-230ENST00000641927 MUC12Q9UKN1 5478 aa6.44□□□□□ -1.38
PHGDH-230ENST00000641927 KRTAP12-3P60328 96 aa6.44□□□□□ -1.38
PHGDH-230ENST00000641927 MT1EP04732 61 aa6.42□□□□□ -1.38
PHGDH-230ENST00000641927 H3BS24 57 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms