RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 LOC101927531A0A1B0GV80 90 aa4.62□□□□□ -1.67
SCARB2-225ENST00000640900 IGKV2D-30A0A075B6S6 120 aa4.61□□□□□ -1.67
SCARB2-225ENST00000640900 SERP2Q8N6R1 65 aa4.61□□□□□ -1.67
SCARB2-225ENST00000640900 MP68P56378 58 aa4.6□□□□□ -1.67
SCARB2-225ENST00000640900 C1orf64Q8NEQ6 169 aa4.59□□□□□ -1.67
SCARB2-225ENST00000640900 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
SCARB2-225ENST00000640900 LINC00208Q96KT6 92 aa4.58□□□□□ -1.68
SCARB2-225ENST00000640900 A0A0U1RQV1 116 aa4.57□□□□□ -1.68
SCARB2-225ENST00000640900 KLKP1Q107X0 134 aa4.55□□□□□ -1.68
SCARB2-225ENST00000640900 COX6B2Q6YFQ2 88 aa4.55□□□□□ -1.68
SCARB2-225ENST00000640900 RBM12B-AS1Q9P1G2 102 aa4.55□□□□□ -1.68
SCARB2-225ENST00000640900 COX7CP15954 63 aa4.54□□□□□ -1.68
SCARB2-225ENST00000640900 MT1HP80294 61 aa4.53□□□□□ -1.68
SCARB2-225ENST00000640900 C4orf26Q17RF5 130 aa4.53□□□□□ -1.68
SCARB2-225ENST00000640900 H1FX-AS1Q4G0G2 97 aa4.5□□□□□ -1.69
SCARB2-225ENST00000640900 C20orf197Q8N268 126 aa4.49□□□□□ -1.69
SCARB2-225ENST00000640900 ANAPC13Q9BS18 74 aa4.49□□□□□ -1.69
SCARB2-225ENST00000640900 SNURFQ9Y675 71 aa4.48□□□□□ -1.69
SCARB2-225ENST00000640900 FAM236DA0A1B0GTK5 79 aa4.47□□□□□ -1.69
SCARB2-225ENST00000640900 FAM236CP0DP71 79 aa4.47□□□□□ -1.69
SCARB2-225ENST00000640900 A8MUN3 132 aa4.46□□□□□ -1.7
SCARB2-225ENST00000640900 CYSTM1Q9H1C7 97 aa4.46□□□□□ -1.7
SCARB2-225ENST00000640900 PCP4P48539 62 aa4.45□□□□□ -1.7
SCARB2-225ENST00000640900 SPANXA2-OT1Q8N9U9 137 aa4.45□□□□□ -1.7
SCARB2-225ENST00000640900 DMAC1Q96GE9 116 aa4.45□□□□□ -1.7
SCARB2-225ENST00000640900 H7BZZ5 65 aa4.44□□□□□ -1.7
SCARB2-225ENST00000640900 CCDC179H3BU77 68 aa4.43□□□□□ -1.7
SCARB2-225ENST00000640900 NDUFC1O43677 76 aa4.43□□□□□ -1.7
SCARB2-225ENST00000640900 KRTAP10-6P60371 365 aaPredicted RBP4.39□□□□□ -1.71
SCARB2-225ENST00000640900 LCA10Q71F78 164 aa4.38□□□□□ -1.71
SCARB2-225ENST00000640900 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
SCARB2-225ENST00000640900 S4R3F8 94 aa4.37□□□□□ -1.71
SCARB2-225ENST00000640900 ACYP2P14621 99 aa4.35□□□□□ -1.71
SCARB2-225ENST00000640900 M0R2T5 61 aa4.34□□□□□ -1.71
SCARB2-225ENST00000640900 CSAG1Q6PB30 78 aa4.32□□□□□ -1.72
SCARB2-225ENST00000640900 MT2AP02795 61 aa4.3□□□□□ -1.72
SCARB2-225ENST00000640900 ATP5EP56381 51 aaPredicted RBP4.29□□□□□ -1.72
SCARB2-225ENST00000640900 TMEM258P61165 79 aa4.28□□□□□ -1.72
SCARB2-225ENST00000640900 H0YAA0 97 aa4.27□□□□□ -1.73
SCARB2-225ENST00000640900 MT1FP04733 61 aa4.27□□□□□ -1.73
SCARB2-225ENST00000640900 COA5Q86WW8 74 aa4.26□□□□□ -1.73
SCARB2-225ENST00000640900 SVIPQ8NHG7 77 aa4.23□□□□□ -1.73
SCARB2-225ENST00000640900 CHKB-CPT1BH3BT56 60 aa4.21□□□□□ -1.74
SCARB2-225ENST00000640900 SPTSSBQ8NFR3 76 aa4.21□□□□□ -1.74
SCARB2-225ENST00000640900 KRTAP10-10P60014 251 aa4.19□□□□□ -1.74
SCARB2-225ENST00000640900 ADM2Q7Z4H4 148 aa4.15□□□□□ -1.75
SCARB2-225ENST00000640900 P0C880 135 aa4.14□□□□□ -1.75
SCARB2-225ENST00000640900 CRIPTQ9P021 101 aa4.14□□□□□ -1.75
SCARB2-225ENST00000640900 SERP1Q9Y6X1 66 aa4.14□□□□□ -1.75
SCARB2-225ENST00000640900 SPRR2GQ9BYE4 73 aa4.13□□□□□ -1.75
SCARB2-225ENST00000640900 RPS28P62857 69 aaKnown RBP4.12□□□□□ -1.75
SCARB2-225ENST00000640900 USH2AO75445 5202 aa4.08□□□□□ -1.76
SCARB2-225ENST00000640900 KRTAP19-8Q3LI54 63 aa4.07□□□□□ -1.76
SCARB2-225ENST00000640900 LINC01558Q9Y6Z2 57 aa4.06□□□□□ -1.76
SCARB2-225ENST00000640900 SMIM26A0A096LP01 95 aa4.02□□□□□ -1.77
SCARB2-225ENST00000640900 M0QZ58 72 aa4.02□□□□□ -1.77
SCARB2-225ENST00000640900 MT1BP07438 61 aa4.02□□□□□ -1.77
SCARB2-225ENST00000640900 SEC61GP60059 68 aa4.01□□□□□ -1.77
SCARB2-225ENST00000640900 Q1T7F1 81 aa4.01□□□□□ -1.77
SCARB2-225ENST00000640900 A0A1B0GU69 56 aa4□□□□□ -1.77
SCARB2-225ENST00000640900 KRTAP13-4Q3LI77 160 aa4□□□□□ -1.77
SCARB2-225ENST00000640900 R4GN34 69 aa4□□□□□ -1.77
SCARB2-225ENST00000640900 V9GYY9 64 aa4□□□□□ -1.77
SCARB2-225ENST00000640900 Q5VV11 94 aa3.99□□□□□ -1.77
SCARB2-225ENST00000640900 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
SCARB2-225ENST00000640900 A0A1B0GU33 70 aa3.97□□□□□ -1.77
SCARB2-225ENST00000640900 KRTAP5-3Q6L8H2 238 aa3.96□□□□□ -1.78
SCARB2-225ENST00000640900 PRR15LQ9BU68 103 aa3.95□□□□□ -1.78
SCARB2-225ENST00000640900 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
SCARB2-225ENST00000640900 A6NN06 94 aa3.94□□□□□ -1.78
SCARB2-225ENST00000640900 KRTAP19-6Q3LI70 58 aa3.94□□□□□ -1.78
SCARB2-225ENST00000640900 FSIP2Q5CZC0 6907 aa3.92□□□□□ -1.78
SCARB2-225ENST00000640900 CRCT1Q9UGL9 99 aa3.92□□□□□ -1.78
SCARB2-225ENST00000640900 SPATA8Q6RVD6 105 aa3.9□□□□□ -1.79
SCARB2-225ENST00000640900 PSPHP1O15172 72 aa3.87□□□□□ -1.79
SCARB2-225ENST00000640900 LINC01554Q52M75 96 aa3.87□□□□□ -1.79
SCARB2-225ENST00000640900 FCGBPQ9Y6R7 5405 aaPredicted RBP3.87□□□□□ -1.79
SCARB2-225ENST00000640900 UQCR11O14957 56 aa3.86□□□□□ -1.79
SCARB2-225ENST00000640900 KRTAP10-5P60370 271 aa3.86□□□□□ -1.79
SCARB2-225ENST00000640900 PLAC4Q8WY50 150 aa3.85□□□□□ -1.79
SCARB2-225ENST00000640900 KRTAP12-1P59990 96 aa3.84□□□□□ -1.79
SCARB2-225ENST00000640900 MT1XP80297 61 aa3.84□□□□□ -1.79
SCARB2-225ENST00000640900 A8MU10 97 aa3.82□□□□□ -1.8
SCARB2-225ENST00000640900 A0A0D9SG42 100 aa3.81□□□□□ -1.8
SCARB2-225ENST00000640900 KRTAP12-2P59991 146 aa3.8□□□□□ -1.8
SCARB2-225ENST00000640900 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
SCARB2-225ENST00000640900 MIR22HGQ0VDD5 57 aa3.79□□□□□ -1.8
SCARB2-225ENST00000640900 PRO2289Q9P1D8 64 aa3.75□□□□□ -1.81
SCARB2-225ENST00000640900 A6NED7 52 aa3.74□□□□□ -1.81
SCARB2-225ENST00000640900 SPINT4Q6UDR6 99 aa3.73□□□□□ -1.81
SCARB2-225ENST00000640900 CDC42SE1Q9NRR8 79 aa3.71□□□□□ -1.82
SCARB2-225ENST00000640900 MT3P25713 68 aa3.7□□□□□ -1.82
SCARB2-225ENST00000640900 CAMK2N1Q7Z7J9 78 aa3.7□□□□□ -1.82
SCARB2-225ENST00000640900 BRK1Q8WUW1 75 aa3.67□□□□□ -1.82
SCARB2-225ENST00000640900 KRTAP10-12P60413 245 aa3.66□□□□□ -1.82
SCARB2-225ENST00000640900 K7ERS5 55 aa3.64□□□□□ -1.83
SCARB2-225ENST00000640900 KRTAP10-7P60409 375 aaPredicted RBP3.64□□□□□ -1.83
SCARB2-225ENST00000640900 C10orf95Q9H7T3 257 aa3.64□□□□□ -1.83
SCARB2-225ENST00000640900 MACF1Q9UPN3 7388 aaKnown RBP3.62□□□□□ -1.83
SCARB2-225ENST00000640900 PRO0628Q9UI54 55 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms