RNA–Protein interactions for RNA: ENST00000640352.1

CNTN2-231, Transcript of contactin 2, human

TSL 5

Gene CNTN2, Length 4,000 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTN2-231	ENST00000640352	PKHD1	P08F94	4074 aa		4.89	□□□□□ -1.63
CNTN2-231	ENST00000640352	LRP1B	Q9NZR2	4599 aa		4.88	□□□□□ -1.63
CNTN2-231	ENST00000640352	HECTD4	Q9Y4D8	3996 aa		4.87	□□□□□ -1.63
CNTN2-231	ENST00000640352	KRTAP13-3	Q3SY46	172 aa		4.87	□□□□□ -1.63
CNTN2-231	ENST00000640352	DNAH6	Q9C0G6	4158 aa		4.86	□□□□□ -1.63
CNTN2-231	ENST00000640352	DNAH2	Q9P225	4427 aa		4.86	□□□□□ -1.63
CNTN2-231	ENST00000640352	COX6B2	Q6YFQ2	88 aa		4.85	□□□□□ -1.63
CNTN2-231	ENST00000640352	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.84	□□□□□ -1.63
CNTN2-231	ENST00000640352		H0YAA0	97 aa		4.78	□□□□□ -1.64
CNTN2-231	ENST00000640352	RPS29	P62273	56 aa	Known RBP	4.78	□□□□□ -1.64
CNTN2-231	ENST00000640352	APOB	P04114	4563 aa	Known RBP	4.77	□□□□□ -1.65
CNTN2-231	ENST00000640352	MYCBP2	O75592	4640 aa		4.77	□□□□□ -1.65
CNTN2-231	ENST00000640352	KRTAP17-1	Q9BYP8	105 aa		4.76	□□□□□ -1.65
CNTN2-231	ENST00000640352	KRTAP1-4	P0C5Y4	121 aa		4.75	□□□□□ -1.65
CNTN2-231	ENST00000640352	VPS13B	Q7Z7G8	4022 aa		4.75	□□□□□ -1.65
CNTN2-231	ENST00000640352	BIRC6	Q9NR09	4857 aa		4.74	□□□□□ -1.65
CNTN2-231	ENST00000640352	FAT3	Q8TDW7	4589 aa		4.74	□□□□□ -1.65
CNTN2-231	ENST00000640352	HERC2	O95714	4834 aa		4.74	□□□□□ -1.65
CNTN2-231	ENST00000640352	LRP1	Q07954	4544 aa	Known RBP	4.74	□□□□□ -1.65
CNTN2-231	ENST00000640352		S4R3F8	94 aa		4.73	□□□□□ -1.65
CNTN2-231	ENST00000640352	PLAC4	Q8WY50	150 aa		4.7	□□□□□ -1.66
CNTN2-231	ENST00000640352	FAT2	Q9NYQ8	4349 aa		4.67	□□□□□ -1.66
CNTN2-231	ENST00000640352	ABCA13	Q86UQ4	5058 aa		4.63	□□□□□ -1.67
CNTN2-231	ENST00000640352	PKD1	P98161	4303 aa		4.62	□□□□□ -1.67
CNTN2-231	ENST00000640352	KRTAP10-4	P60372	401 aa	Predicted RBP	4.62	□□□□□ -1.67
CNTN2-231	ENST00000640352	TPRXL	Q17RH7	258 aa		4.61	□□□□□ -1.67
CNTN2-231	ENST00000640352		R4GN34	69 aa		4.61	□□□□□ -1.67
CNTN2-231	ENST00000640352		M0R2T5	61 aa		4.6	□□□□□ -1.67
CNTN2-231	ENST00000640352	KRTAP10-8	P60410	259 aa		4.6	□□□□□ -1.67
CNTN2-231	ENST00000640352	HSPG2	P98160	4391 aa		4.6	□□□□□ -1.67
CNTN2-231	ENST00000640352	MT1HL1	P0DM35	61 aa		4.59	□□□□□ -1.67
CNTN2-231	ENST00000640352	KRTAP3-1	Q9BYR8	98 aa		4.59	□□□□□ -1.68
CNTN2-231	ENST00000640352		M0QZ58	72 aa		4.57	□□□□□ -1.68
CNTN2-231	ENST00000640352	HERC1	Q15751	4861 aa		4.57	□□□□□ -1.68
CNTN2-231	ENST00000640352	KRTAP15-1	Q3LI76	137 aa		4.55	□□□□□ -1.68
CNTN2-231	ENST00000640352	PCLO	Q9Y6V0	5065 aa		4.54	□□□□□ -1.68
CNTN2-231	ENST00000640352	LRP2	P98164	4655 aa		4.53	□□□□□ -1.68
CNTN2-231	ENST00000640352	XP32	Q5T750	250 aa		4.46	□□□□□ -1.69
CNTN2-231	ENST00000640352	RNF213	Q63HN8	5207 aa		4.45	□□□□□ -1.7
CNTN2-231	ENST00000640352	KRTAP13-4	Q3LI77	160 aa		4.43	□□□□□ -1.7
CNTN2-231	ENST00000640352	UBR4	Q5T4S7	5183 aa		4.42	□□□□□ -1.7
CNTN2-231	ENST00000640352	KRTAP12-2	P59991	146 aa		4.39	□□□□□ -1.71
CNTN2-231	ENST00000640352	LPA	P08519	4548 aa		4.38	□□□□□ -1.71
CNTN2-231	ENST00000640352	KRTAP10-6	P60371	365 aa	Predicted RBP	4.36	□□□□□ -1.71
CNTN2-231	ENST00000640352	MUC2	Q02817	5179 aa		4.35	□□□□□ -1.71
CNTN2-231	ENST00000640352	PP632	Q6XCG6	107 aa		4.35	□□□□□ -1.71
CNTN2-231	ENST00000640352	KRTAP3-3	Q9BYR6	98 aa		4.34	□□□□□ -1.71
CNTN2-231	ENST00000640352	KRTAP12-1	P59990	96 aa		4.31	□□□□□ -1.72
CNTN2-231	ENST00000640352	PRO2289	Q9P1D8	64 aa		4.31	□□□□□ -1.72
CNTN2-231	ENST00000640352	KRTAP3-2	Q9BYR7	98 aa		4.3	□□□□□ -1.72
CNTN2-231	ENST00000640352	PKHD1L1	Q86WI1	4243 aa		4.28	□□□□□ -1.72
CNTN2-231	ENST00000640352	FSIP2	Q5CZC0	6907 aa		4.26	□□□□□ -1.73
CNTN2-231	ENST00000640352	TNP1	P09430	55 aa		4.21	□□□□□ -1.74
CNTN2-231	ENST00000640352	KRTAP4-1	Q9BYQ7	146 aa		4.19	□□□□□ -1.74
CNTN2-231	ENST00000640352	FAT4	Q6V0I7	4981 aa		4.19	□□□□□ -1.74
CNTN2-231	ENST00000640352	TNXB	P22105	4242 aa		4.16	□□□□□ -1.74
CNTN2-231	ENST00000640352	HMCN2	Q8NDA2	5059 aa		4.16	□□□□□ -1.74
CNTN2-231	ENST00000640352	INE1	O15225	51 aa		4.13	□□□□□ -1.75
CNTN2-231	ENST00000640352	KRTAP10-10	P60014	251 aa		4.1	□□□□□ -1.75
CNTN2-231	ENST00000640352	KRTAP23-1	A1A580	65 aa		4.07	□□□□□ -1.76
CNTN2-231	ENST00000640352	LOR	P23490	312 aa	Predicted RBP	4.07	□□□□□ -1.76
CNTN2-231	ENST00000640352	MT1H	P80294	61 aa		3.92	□□□□□ -1.78
CNTN2-231	ENST00000640352	LCE2C	Q5TA81	110 aa		3.81	□□□□□ -1.8
CNTN2-231	ENST00000640352	USH2A	O75445	5202 aa		3.8	□□□□□ -1.8
CNTN2-231	ENST00000640352	MUC17	Q685J3	4493 aa		3.8	□□□□□ -1.8
CNTN2-231	ENST00000640352	MT2A	P02795	61 aa		3.75	□□□□□ -1.81
CNTN2-231	ENST00000640352	MT1F	P04733	61 aa		3.75	□□□□□ -1.81
CNTN2-231	ENST00000640352	KRTAP19-2	Q3LHN2	52 aa		3.75	□□□□□ -1.81
CNTN2-231	ENST00000640352	LCE2A	Q5TA79	106 aa	Predicted RBP	3.68	□□□□□ -1.82
CNTN2-231	ENST00000640352	FLG	P20930	4061 aa	Predicted RBP	3.66	□□□□□ -1.82
CNTN2-231	ENST00000640352	LCE3A	Q5TA76	89 aa		3.65	□□□□□ -1.83
CNTN2-231	ENST00000640352	KRTAP9-8	Q9BYQ0	159 aa		3.65	□□□□□ -1.83
CNTN2-231	ENST00000640352	KRTAP9-2	Q9BYQ4	174 aa		3.62	□□□□□ -1.83
CNTN2-231	ENST00000640352	KRTAP10-12	P60413	245 aa		3.56	□□□□□ -1.84
CNTN2-231	ENST00000640352	KRTAP12-3	P60328	96 aa		3.56	□□□□□ -1.84
CNTN2-231	ENST00000640352	OBSCN	Q5VST9	7968 aa		3.55	□□□□□ -1.84
CNTN2-231	ENST00000640352	LCE2B	O14633	110 aa		3.54	□□□□□ -1.84
CNTN2-231	ENST00000640352	SPRR2G	Q9BYE4	73 aa		3.53	□□□□□ -1.84
CNTN2-231	ENST00000640352	KRTAP19-1	Q8IUB9	90 aa		3.52	□□□□□ -1.85
CNTN2-231	ENST00000640352	KRTAP9-3	Q9BYQ3	159 aa		3.51	□□□□□ -1.85
CNTN2-231	ENST00000640352	CRCT1	Q9UGL9	99 aa		3.49	□□□□□ -1.85
CNTN2-231	ENST00000640352	SPRR5	A0A1B0GTR4	108 aa		3.44	□□□□□ -1.86
CNTN2-231	ENST00000640352	SSPO	A2VEC9	5147 aa		3.44	□□□□□ -1.86
CNTN2-231	ENST00000640352	KRTAP9-6	A0A140TA67	174 aa		3.43	□□□□□ -1.86
CNTN2-231	ENST00000640352	KMT2D	O14686	5537 aa		3.43	□□□□□ -1.86
CNTN2-231	ENST00000640352	SYNE2	Q8WXH0	6885 aa	Known RBP	3.42	□□□□□ -1.86
CNTN2-231	ENST00000640352	LCE2D	Q5TA82	110 aa	Predicted RBP	3.41	□□□□□ -1.86
CNTN2-231	ENST00000640352	MT1B	P07438	61 aa		3.41	□□□□□ -1.86
CNTN2-231	ENST00000640352	KRTAP8-1	Q8IUC2	63 aa		3.4	□□□□□ -1.87
CNTN2-231	ENST00000640352	SYNE1	Q8NF91	8797 aa	Known RBP	3.39	□□□□□ -1.87
CNTN2-231	ENST00000640352	MACF1	Q9UPN3	7388 aa	Known RBP	3.37	□□□□□ -1.87
CNTN2-231	ENST00000640352	DST	Q03001	7570 aa	Known RBP	3.37	□□□□□ -1.87
CNTN2-231	ENST00000640352	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.36	□□□□□ -1.87
CNTN2-231	ENST00000640352	KRTAP4-8	A0A0G2JLE6	195 aa		3.34	□□□□□ -1.88
CNTN2-231	ENST00000640352	KRTAP4-8	Q9BYQ9	185 aa		3.34	□□□□□ -1.88
CNTN2-231	ENST00000640352	KRTAP10-7	P60409	375 aa	Predicted RBP	3.33	□□□□□ -1.88
CNTN2-231	ENST00000640352	KRTAP10-5	P60370	271 aa		3.32	□□□□□ -1.88
CNTN2-231	ENST00000640352	KRTAP19-8	Q3LI54	63 aa		3.31	□□□□□ -1.88
CNTN2-231	ENST00000640352	MT1X	P80297	61 aa		3.31	□□□□□ -1.88
CNTN2-231	ENST00000640352	SPRR2F	Q96RM1	72 aa		3.31	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms