RNA–Protein interactions for RNA: ENST00000639394.1

PAX6-256, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 1,988 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-256	ENST00000639394		R4GN34	69 aa		5.68	□□□□□ -1.5
PAX6-256	ENST00000639394	PKD1	P98161	4303 aa		5.68	□□□□□ -1.5
PAX6-256	ENST00000639394	DNAH5	Q8TE73	4624 aa		5.67	□□□□□ -1.5
PAX6-256	ENST00000639394	INE1	O15225	51 aa		5.67	□□□□□ -1.5
PAX6-256	ENST00000639394		A0A1B0GVY2	172 aa		5.66	□□□□□ -1.5
PAX6-256	ENST00000639394	KRTAP10-1	P60331	282 aa		5.66	□□□□□ -1.5
PAX6-256	ENST00000639394		S4R3F8	94 aa		5.66	□□□□□ -1.5
PAX6-256	ENST00000639394	DNAH8	Q96JB1	4490 aa		5.64	□□□□□ -1.51
PAX6-256	ENST00000639394	RYR3	Q15413	4870 aa		5.58	□□□□□ -1.52
PAX6-256	ENST00000639394	PKHD1	P08F94	4074 aa		5.57	□□□□□ -1.52
PAX6-256	ENST00000639394	LRP1B	Q9NZR2	4599 aa		5.56	□□□□□ -1.52
PAX6-256	ENST00000639394	DYNC1H1	Q14204	4646 aa	Known RBP	5.55	□□□□□ -1.52
PAX6-256	ENST00000639394		A0A0D9SG42	100 aa		5.55	□□□□□ -1.52
PAX6-256	ENST00000639394	KRTAP10-6	P60371	365 aa	Predicted RBP	5.49	□□□□□ -1.53
PAX6-256	ENST00000639394	SRRM2	Q9UQ35	2752 aa	Known RBP	5.49	□□□□□ -1.53
PAX6-256	ENST00000639394	APOB	P04114	4563 aa	Known RBP	5.49	□□□□□ -1.53
PAX6-256	ENST00000639394	LCE2A	Q5TA79	106 aa	Predicted RBP	5.49	□□□□□ -1.53
PAX6-256	ENST00000639394	KRTAP13-4	Q3LI77	160 aa		5.47	□□□□□ -1.53
PAX6-256	ENST00000639394	KRTAP12-2	P59991	146 aa		5.46	□□□□□ -1.54
PAX6-256	ENST00000639394	KRTAP3-1	Q9BYR8	98 aa		5.46	□□□□□ -1.54
PAX6-256	ENST00000639394	SMR3B	P02814	79 aa	Predicted RBP	5.45	□□□□□ -1.54
PAX6-256	ENST00000639394	LOC100996750	A0A140TA64	210 aa		5.44	□□□□□ -1.54
PAX6-256	ENST00000639394	PP632	Q6XCG6	107 aa		5.44	□□□□□ -1.54
PAX6-256	ENST00000639394	KRTAP4-6	Q9BYQ5	205 aa		5.44	□□□□□ -1.54
PAX6-256	ENST00000639394	VPS13B	Q7Z7G8	4022 aa		5.44	□□□□□ -1.54
PAX6-256	ENST00000639394	KRTAP10-4	P60372	401 aa	Predicted RBP	5.42	□□□□□ -1.54
PAX6-256	ENST00000639394	KRTAP12-1	P59990	96 aa		5.42	□□□□□ -1.54
PAX6-256	ENST00000639394	HSPG2	P98160	4391 aa		5.38	□□□□□ -1.55
PAX6-256	ENST00000639394	EPPK1	P58107	5090 aa	Known RBP	5.38	□□□□□ -1.55
PAX6-256	ENST00000639394	FAT1	Q14517	4588 aa		5.38	□□□□□ -1.55
PAX6-256	ENST00000639394	KRTAP1-4	P0C5Y4	121 aa		5.37	□□□□□ -1.55
PAX6-256	ENST00000639394	RYR1	P21817	5038 aa		5.36	□□□□□ -1.55
PAX6-256	ENST00000639394		Q5VSD8	79 aa		5.35	□□□□□ -1.55
PAX6-256	ENST00000639394	KRTAP17-1	Q9BYP8	105 aa		5.35	□□□□□ -1.55
PAX6-256	ENST00000639394	PKHD1L1	Q86WI1	4243 aa		5.33	□□□□□ -1.56
PAX6-256	ENST00000639394	SPRR5	A0A1B0GTR4	108 aa		5.32	□□□□□ -1.56
PAX6-256	ENST00000639394	KRTAP13-2	Q52LG2	175 aa		5.32	□□□□□ -1.56
PAX6-256	ENST00000639394	KIAA1109	Q2LD37	5005 aa		5.31	□□□□□ -1.56
PAX6-256	ENST00000639394	KRTAP10-8	P60410	259 aa		5.31	□□□□□ -1.56
PAX6-256	ENST00000639394		M0QZ58	72 aa		5.29	□□□□□ -1.56
PAX6-256	ENST00000639394	LCE2C	Q5TA81	110 aa		5.23	□□□□□ -1.57
PAX6-256	ENST00000639394	BIRC6	Q9NR09	4857 aa		5.22	□□□□□ -1.57
PAX6-256	ENST00000639394	KRTAP4-5	Q9BYR2	181 aa		5.21	□□□□□ -1.58
PAX6-256	ENST00000639394	RPS29	P62273	56 aa	Known RBP	5.17	□□□□□ -1.58
PAX6-256	ENST00000639394	FAT3	Q8TDW7	4589 aa		5.17	□□□□□ -1.58
PAX6-256	ENST00000639394	TNXB	P22105	4242 aa		5.16	□□□□□ -1.58
PAX6-256	ENST00000639394	LRP1	Q07954	4544 aa	Known RBP	5.16	□□□□□ -1.58
PAX6-256	ENST00000639394	HERC2	O95714	4834 aa		5.15	□□□□□ -1.59
PAX6-256	ENST00000639394	MT1HL1	P0DM35	61 aa		5.15	□□□□□ -1.59
PAX6-256	ENST00000639394	LOR	P23490	312 aa	Predicted RBP	5.13	□□□□□ -1.59
PAX6-256	ENST00000639394	MYCBP2	O75592	4640 aa		5.1	□□□□□ -1.59
PAX6-256	ENST00000639394	ABCA13	Q86UQ4	5058 aa		5.07	□□□□□ -1.6
PAX6-256	ENST00000639394	DMBT1	Q9UGM3	2413 aa	Predicted RBP	5.03	□□□□□ -1.6
PAX6-256	ENST00000639394	C9orf92	A6NGG3	77 aa		4.95	□□□□□ -1.62
PAX6-256	ENST00000639394	PCLO	Q9Y6V0	5065 aa		4.93	□□□□□ -1.62
PAX6-256	ENST00000639394	KRTAP4-8	Q9BYQ9	185 aa		4.91	□□□□□ -1.62
PAX6-256	ENST00000639394	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.82	□□□□□ -1.64
PAX6-256	ENST00000639394	KRTAP9-2	Q9BYQ4	174 aa		4.82	□□□□□ -1.64
PAX6-256	ENST00000639394	LPA	P08519	4548 aa		4.8	□□□□□ -1.64
PAX6-256	ENST00000639394	KRTAP9-6	A0A140TA67	174 aa		4.79	□□□□□ -1.64
PAX6-256	ENST00000639394	HERC1	Q15751	4861 aa		4.77	□□□□□ -1.65
PAX6-256	ENST00000639394	LRP2	P98164	4655 aa		4.75	□□□□□ -1.65
PAX6-256	ENST00000639394	HMCN2	Q8NDA2	5059 aa		4.74	□□□□□ -1.65
PAX6-256	ENST00000639394	TNP1	P09430	55 aa		4.71	□□□□□ -1.66
PAX6-256	ENST00000639394	MUC17	Q685J3	4493 aa		4.69	□□□□□ -1.66
PAX6-256	ENST00000639394	LCE3B	Q5TA77	95 aa		4.67	□□□□□ -1.66
PAX6-256	ENST00000639394	KRTAP4-1	Q9BYQ7	146 aa		4.64	□□□□□ -1.67
PAX6-256	ENST00000639394	KRTAP4-12	Q9BQ66	201 aa		4.62	□□□□□ -1.67
PAX6-256	ENST00000639394	KRTAP9-9	Q9BYP9	154 aa		4.57	□□□□□ -1.68
PAX6-256	ENST00000639394	KRTAP9-4	Q9BYQ2	154 aa		4.57	□□□□□ -1.68
PAX6-256	ENST00000639394	KRTAP4-8	A0A0G2JLE6	195 aa		4.56	□□□□□ -1.68
PAX6-256	ENST00000639394	KRTAP10-10	P60014	251 aa		4.56	□□□□□ -1.68
PAX6-256	ENST00000639394	UBR4	Q5T4S7	5183 aa		4.52	□□□□□ -1.69
PAX6-256	ENST00000639394	KRTAP19-2	Q3LHN2	52 aa		4.51	□□□□□ -1.69
PAX6-256	ENST00000639394	MUC2	Q02817	5179 aa		4.49	□□□□□ -1.69
PAX6-256	ENST00000639394	RNF213	Q63HN8	5207 aa		4.49	□□□□□ -1.69
PAX6-256	ENST00000639394	KRTAP19-1	Q8IUB9	90 aa		4.47	□□□□□ -1.69
PAX6-256	ENST00000639394	KRTAP4-7	Q9BYR0	210 aa		4.41	□□□□□ -1.7
PAX6-256	ENST00000639394	FLG	P20930	4061 aa	Predicted RBP	4.38	□□□□□ -1.71
PAX6-256	ENST00000639394	LCE1D	Q5T752	114 aa		4.36	□□□□□ -1.71
PAX6-256	ENST00000639394	MT1H	P80294	61 aa		4.34	□□□□□ -1.71
PAX6-256	ENST00000639394	FAT4	Q6V0I7	4981 aa		4.32	□□□□□ -1.72
PAX6-256	ENST00000639394		M0R2T5	61 aa		4.25	□□□□□ -1.73
PAX6-256	ENST00000639394	KRTAP4-9	Q9BYQ8	210 aa		4.25	□□□□□ -1.73
PAX6-256	ENST00000639394	KRTAP9-8	Q9BYQ0	159 aa		4.23	□□□□□ -1.73
PAX6-256	ENST00000639394	KRTAP4-2	Q9BYR5	136 aa		4.22	□□□□□ -1.73
PAX6-256	ENST00000639394	KRTAP8-1	Q8IUC2	63 aa		4.2	□□□□□ -1.74
PAX6-256	ENST00000639394	KRTAP10-12	P60413	245 aa		4.17	□□□□□ -1.74
PAX6-256	ENST00000639394	KRTAP2-2	Q9BYT5	123 aa		4.17	□□□□□ -1.74
PAX6-256	ENST00000639394	MT2A	P02795	61 aa		4.14	□□□□□ -1.75
PAX6-256	ENST00000639394	KRTAP5-3	Q6L8H2	238 aa		4.14	□□□□□ -1.75
PAX6-256	ENST00000639394	LCE3A	Q5TA76	89 aa		4.14	□□□□□ -1.75
PAX6-256	ENST00000639394	MT1F	P04733	61 aa		4.13	□□□□□ -1.75
PAX6-256	ENST00000639394	KRTAP4-11	Q9BYQ6	195 aa		4.08	□□□□□ -1.76
PAX6-256	ENST00000639394	KRTAP2-3	P0C7H8	128 aa		4.05	□□□□□ -1.76
PAX6-256	ENST00000639394	KRTAP2-4	Q9BYR9	128 aa		4.05	□□□□□ -1.76
PAX6-256	ENST00000639394	KRTAP2-1	Q9BYU5	128 aa		4.05	□□□□□ -1.76
PAX6-256	ENST00000639394	SPRR2G	Q9BYE4	73 aa		4.03	□□□□□ -1.76
PAX6-256	ENST00000639394	KRTAP9-3	Q9BYQ3	159 aa		4.03	□□□□□ -1.76
PAX6-256	ENST00000639394	KRTAP12-3	P60328	96 aa		3.98	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 59 ms