RNA–Protein interactions for RNA: ENST00000639394.1

PAX6-256, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,988 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-256ENST00000639394 NISCHQ9Y2I1 1504 aa20.83■□□□□ 0.92
PAX6-256ENST00000639394 PELP1Q8IZL8 1130 aaKnown RBP20.15■□□□□ 0.82
PAX6-256ENST00000639394 MYT1Q01538 1121 aa20.08■□□□□ 0.81
PAX6-256ENST00000639394 TTBK1Q5TCY1 1321 aaPredicted RBP19.46■□□□□ 0.71
PAX6-256ENST00000639394 SLC24A1O60721 1099 aa18.46■□□□□ 0.55
PAX6-256ENST00000639394 ERICH6Q7L0X2 663 aa18.44■□□□□ 0.54
PAX6-256ENST00000639394 PRKCSHP14314 528 aaPredicted RBP18.3■□□□□ 0.52
PAX6-256ENST00000639394 CCDC180Q9P1Z9 1646 aa18.24■□□□□ 0.51
PAX6-256ENST00000639394 APLP2Q06481 763 aa18.22■□□□□ 0.51
PAX6-256ENST00000639394 HRCP23327 699 aa17.96■□□□□ 0.47
PAX6-256ENST00000639394 BCL11AQ9H165 835 aa17.75■□□□□ 0.43
PAX6-256ENST00000639394 DAXXQ9UER7 740 aaPredicted RBP17.73■□□□□ 0.43
PAX6-256ENST00000639394 SCAF1Q9H7N4 1312 aaKnown RBP17.57■□□□□ 0.4
PAX6-256ENST00000639394 ZCCHC6Q5VYS8 1495 aaKnown RBP17.48■□□□□ 0.39
PAX6-256ENST00000639394 FAM9AQ8IZU1 332 aaPredicted RBP17.4■□□□□ 0.38
PAX6-256ENST00000639394 CENPBP07199 599 aaPredicted RBP17.37■□□□□ 0.37
PAX6-256ENST00000639394 ABCC9O60706 1549 aa17.34■□□□□ 0.37
PAX6-256ENST00000639394 DCAF1Q9Y4B6 1507 aa17.25■□□□□ 0.35
PAX6-256ENST00000639394 DCAF8L2P0C7V8 631 aa17.17■□□□□ 0.34
PAX6-256ENST00000639394 EIF5BO60841 1220 aaKnown RBP17.11■□□□□ 0.33
PAX6-256ENST00000639394 MYO15BQ96JP2 1530 aa17.1■□□□□ 0.33
PAX6-256ENST00000639394 NACADO15069 1562 aa17.02■□□□□ 0.31
PAX6-256ENST00000639394 ACIN1Q9UKV3 1341 aaKnown RBP16.93■□□□□ 0.3
PAX6-256ENST00000639394 PPARGC1BQ86YN6 1023 aaKnown RBP16.93■□□□□ 0.3
PAX6-256ENST00000639394 ANP32EQ9BTT0 268 aa16.9■□□□□ 0.3
PAX6-256ENST00000639394 RB1CC1Q8TDY2 1594 aa16.9■□□□□ 0.3
PAX6-256ENST00000639394 SHROOM4Q9ULL8 1493 aa16.82■□□□□ 0.28
PAX6-256ENST00000639394 ZEB1P37275 1124 aaPredicted RBP16.79■□□□□ 0.28
PAX6-256ENST00000639394 UBE2Q2Q8WVN8 375 aa16.73■□□□□ 0.27
PAX6-256ENST00000639394 SCRIBQ14160 1630 aa16.72■□□□□ 0.27
PAX6-256ENST00000639394 GTF3C3Q9Y5Q9 886 aa16.66■□□□□ 0.26
PAX6-256ENST00000639394 NEUROD1Q13562 356 aa16.55■□□□□ 0.24
PAX6-256ENST00000639394 UNC13AQ9UPW8 1703 aa16.54■□□□□ 0.24
PAX6-256ENST00000639394 PCGF6Q9BYE7 350 aa16.49■□□□□ 0.23
PAX6-256ENST00000639394 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
PAX6-256ENST00000639394 BICRAQ9NZM4 1560 aa16.4■□□□□ 0.22
PAX6-256ENST00000639394 NCBP3Q53F19 620 aaKnown RBP16.4■□□□□ 0.22
PAX6-256ENST00000639394 PODXL2Q9NZ53 605 aa16.37■□□□□ 0.21
PAX6-256ENST00000639394 PLEKHG5O94827 1062 aa16.33■□□□□ 0.2
PAX6-256ENST00000639394 MYT1LQ9UL68 1186 aa16.31■□□□□ 0.2
PAX6-256ENST00000639394 RANGAP1P46060 587 aaPredicted RBP16.31■□□□□ 0.2
PAX6-256ENST00000639394 ERICH6BQ5W0A0 696 aa16.31■□□□□ 0.2
PAX6-256ENST00000639394 PABPN1Q86U42 306 aaKnown RBP eCLIP16.31■□□□□ 0.2
PAX6-256ENST00000639394 ANO8Q9HCE9 1232 aaPredicted RBP16.27■□□□□ 0.2
PAX6-256ENST00000639394 PKNOX2Q96KN3 472 aa16.26■□□□□ 0.19
PAX6-256ENST00000639394 ARXQ96QS3 562 aa16.25■□□□□ 0.19
PAX6-256ENST00000639394 CLSPNQ9HAW4 1339 aa16.22■□□□□ 0.19
PAX6-256ENST00000639394 CECR2Q9BXF3 1484 aa16.18■□□□□ 0.18
PAX6-256ENST00000639394 SUPT5HO00267 1087 aaKnown RBP16.11■□□□□ 0.17
PAX6-256ENST00000639394 RSF1Q96T23 1441 aaPredicted RBP16.1■□□□□ 0.17
PAX6-256ENST00000639394 NEFLP07196 543 aa16.09■□□□□ 0.17
PAX6-256ENST00000639394 BAZ1AQ9NRL2 1556 aaPredicted RBP16.09■□□□□ 0.17
PAX6-256ENST00000639394 MROH2BQ7Z745 1585 aa16.08■□□□□ 0.16
PAX6-256ENST00000639394 SMARCA4P51532 1647 aa16.04■□□□□ 0.16
PAX6-256ENST00000639394 TRIM26Q12899 539 aaPredicted RBP15.98■□□□□ 0.15
PAX6-256ENST00000639394 TSHZ2Q9NRE2 1034 aa15.93■□□□□ 0.14
PAX6-256ENST00000639394 WIZO95785 1651 aa15.93■□□□□ 0.14
PAX6-256ENST00000639394 EIF4G1Q04637 1599 aaKnown RBP15.91■□□□□ 0.14
PAX6-256ENST00000639394 SALL2Q9Y467 1007 aaPredicted RBP15.89■□□□□ 0.13
PAX6-256ENST00000639394 PEG3Q9GZU2 1588 aa15.87■□□□□ 0.13
PAX6-256ENST00000639394 PDIA4P13667 645 aaKnown RBP15.84■□□□□ 0.13
PAX6-256ENST00000639394 ATAD2BQ9ULI0 1458 aa15.81■□□□□ 0.12
PAX6-256ENST00000639394 PDE4CQ08493 712 aa15.8■□□□□ 0.12
PAX6-256ENST00000639394 SMARCA2P51531 1590 aa15.8■□□□□ 0.12
PAX6-256ENST00000639394 GLIPR1L2Q4G1C9 344 aa15.78■□□□□ 0.12
PAX6-256ENST00000639394 TOP2AP11388 1531 aaKnown RBP15.78■□□□□ 0.12
PAX6-256ENST00000639394 KLHL34Q8N239 644 aa15.77■□□□□ 0.12
PAX6-256ENST00000639394 DIEXFQ68CQ4 756 aaKnown RBP15.73■□□□□ 0.11
PAX6-256ENST00000639394 NCAPD3P42695 1498 aa15.71■□□□□ 0.11
PAX6-256ENST00000639394 BAZ1BQ9UIG0 1483 aaKnown RBP15.7■□□□□ 0.1
PAX6-256ENST00000639394 CC2D2AQ9P2K1 1620 aa15.7■□□□□ 0.1
PAX6-256ENST00000639394 HMGXB3Q12766 1538 aa15.68■□□□□ 0.1
PAX6-256ENST00000639394 CCDC136Q96JN2 1154 aa15.67■□□□□ 0.1
PAX6-256ENST00000639394 DEKP35659 375 aaKnown RBP15.66■□□□□ 0.1
PAX6-256ENST00000639394 FGD1P98174 961 aa15.64■□□□□ 0.09
PAX6-256ENST00000639394 HOMEZQ8IX15 550 aa15.63■□□□□ 0.09
PAX6-256ENST00000639394 TAF7LQ5H9L4 462 aa15.61■□□□□ 0.09
PAX6-256ENST00000639394 CCDC88BA6NC98 1476 aa15.61■□□□□ 0.09
PAX6-256ENST00000639394 SUPT16HQ9Y5B9 1047 aaKnown RBP15.59■□□□□ 0.09
PAX6-256ENST00000639394 TIMELESSQ9UNS1 1208 aa15.57■□□□□ 0.08
PAX6-256ENST00000639394 RTN4Q9NQC3 1192 aaKnown RBP15.49■□□□□ 0.07
PAX6-256ENST00000639394 FANCIQ9NVI1 1328 aa15.47■□□□□ 0.07
PAX6-256ENST00000639394 AAMPQ13685 434 aa15.45■□□□□ 0.06
PAX6-256ENST00000639394 RBM19Q9Y4C8 960 aaKnown RBP15.44■□□□□ 0.06
PAX6-256ENST00000639394 ZMYND15Q9H091 742 aa15.43■□□□□ 0.06
PAX6-256ENST00000639394 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
PAX6-256ENST00000639394 ZNF326Q5BKZ1 582 aaKnown RBP15.42■□□□□ 0.06
PAX6-256ENST00000639394 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.41■□□□□ 0.06
PAX6-256ENST00000639394 TRIM41Q8WV44 630 aa15.4■□□□□ 0.06
PAX6-256ENST00000639394 BCL11BQ9C0K0 894 aaPredicted RBP15.4■□□□□ 0.06
PAX6-256ENST00000639394 CCER1Q8TC90 406 aaPredicted RBP15.39■□□□□ 0.05
PAX6-256ENST00000639394 CHIC1Q5VXU3 224 aa15.38■□□□□ 0.05
PAX6-256ENST00000639394 RSPH6AQ9H0K4 717 aa15.35■□□□□ 0.05
PAX6-256ENST00000639394 RBM10P98175 930 aaKnown RBP15.33■□□□□ 0.04
PAX6-256ENST00000639394 PLPPR3Q6T4P5 718 aa15.33■□□□□ 0.04
PAX6-256ENST00000639394 CFTRP13569 1480 aa15.32■□□□□ 0.04
PAX6-256ENST00000639394 MSH5O43196 834 aa15.31■□□□□ 0.04
PAX6-256ENST00000639394 CADPSQ9ULU8 1353 aa15.29■□□□□ 0.04
PAX6-256ENST00000639394 BRD2P25440 801 aaKnown RBP15.28■□□□□ 0.04
PAX6-256ENST00000639394 TULP1O00294 542 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms