RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	IGKV2-30	P06310	120 aa		4.79	□□□□□ -1.64
CACNA1A-256	ENST00000637981	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.79	□□□□□ -1.64
CACNA1A-256	ENST00000637981	FAM236D	A0A1B0GTK5	79 aa		4.78	□□□□□ -1.64
CACNA1A-256	ENST00000637981	FAM236C	P0DP71	79 aa		4.78	□□□□□ -1.64
CACNA1A-256	ENST00000637981	HRES1	P13985	223 aa		4.77	□□□□□ -1.65
CACNA1A-256	ENST00000637981	SMIM20	Q8N5G0	67 aa		4.76	□□□□□ -1.65
CACNA1A-256	ENST00000637981	LOC101927531	A0A1B0GV80	90 aa		4.75	□□□□□ -1.65
CACNA1A-256	ENST00000637981	MP68	P56378	58 aa		4.75	□□□□□ -1.65
CACNA1A-256	ENST00000637981	MPLKIP	Q8TAP9	179 aa		4.75	□□□□□ -1.65
CACNA1A-256	ENST00000637981		H0Y9P7	68 aa		4.74	□□□□□ -1.65
CACNA1A-256	ENST00000637981	MT2A	P02795	61 aa		4.74	□□□□□ -1.65
CACNA1A-256	ENST00000637981	C5orf47	Q569G3	176 aa		4.74	□□□□□ -1.65
CACNA1A-256	ENST00000637981	OCR1	Q9BZK8	76 aa		4.74	□□□□□ -1.65
CACNA1A-256	ENST00000637981	FAM236A	A0A1B0GUQ0	79 aa		4.73	□□□□□ -1.65
CACNA1A-256	ENST00000637981	FAM236B	A0A1B0GV22	79 aa		4.73	□□□□□ -1.65
CACNA1A-256	ENST00000637981		H3BPC8	53 aa		4.72	□□□□□ -1.65
CACNA1A-256	ENST00000637981	MT1F	P04733	61 aa		4.72	□□□□□ -1.65
CACNA1A-256	ENST00000637981	CYP4F30P	Q9H0H9	118 aa		4.72	□□□□□ -1.65
CACNA1A-256	ENST00000637981	MACF1	Q9UPN3	7388 aa	Known RBP	4.7	□□□□□ -1.66
CACNA1A-256	ENST00000637981	C1orf64	Q8NEQ6	169 aa		4.7	□□□□□ -1.66
CACNA1A-256	ENST00000637981	TRAV7	A0A075B6U4	112 aa		4.69	□□□□□ -1.66
CACNA1A-256	ENST00000637981	KRTAP10-10	P60014	251 aa		4.69	□□□□□ -1.66
CACNA1A-256	ENST00000637981	LINC00208	Q96KT6	92 aa		4.69	□□□□□ -1.66
CACNA1A-256	ENST00000637981	PCP4	P48539	62 aa		4.67	□□□□□ -1.66
CACNA1A-256	ENST00000637981	C4orf26	Q17RF5	130 aa		4.67	□□□□□ -1.66
CACNA1A-256	ENST00000637981	H1FX-AS1	Q4G0G2	97 aa		4.66	□□□□□ -1.66
CACNA1A-256	ENST00000637981	SYNE2	Q8WXH0	6885 aa	Known RBP	4.65	□□□□□ -1.67
CACNA1A-256	ENST00000637981	KRTAP23-1	A1A580	65 aa		4.65	□□□□□ -1.67
CACNA1A-256	ENST00000637981	SERP2	Q8N6R1	65 aa		4.63	□□□□□ -1.67
CACNA1A-256	ENST00000637981	KRTAP19-6	Q3LI70	58 aa		4.62	□□□□□ -1.67
CACNA1A-256	ENST00000637981		A8MUN3	132 aa		4.6	□□□□□ -1.67
CACNA1A-256	ENST00000637981	KLKP1	Q107X0	134 aa		4.58	□□□□□ -1.68
CACNA1A-256	ENST00000637981	KRTAP6-3	Q3LI67	103 aa		4.58	□□□□□ -1.68
CACNA1A-256	ENST00000637981	KRTAP3-1	Q9BYR8	98 aa		4.56	□□□□□ -1.68
CACNA1A-256	ENST00000637981		S4R3F8	94 aa		4.56	□□□□□ -1.68
CACNA1A-256	ENST00000637981	C20orf197	Q8N268	126 aa		4.55	□□□□□ -1.68
CACNA1A-256	ENST00000637981	ANAPC13	Q9BS18	74 aa		4.55	□□□□□ -1.68
CACNA1A-256	ENST00000637981	COX7C	P15954	63 aa		4.54	□□□□□ -1.68
CACNA1A-256	ENST00000637981	SNURF	Q9Y675	71 aa		4.53	□□□□□ -1.68
CACNA1A-256	ENST00000637981	CSAG1	Q6PB30	78 aa		4.52	□□□□□ -1.69
CACNA1A-256	ENST00000637981	DMAC1	Q96GE9	116 aa		4.5	□□□□□ -1.69
CACNA1A-256	ENST00000637981	NDUFC1	O43677	76 aa		4.49	□□□□□ -1.69
CACNA1A-256	ENST00000637981	LCA10	Q71F78	164 aa		4.49	□□□□□ -1.69
CACNA1A-256	ENST00000637981	SPANXA2-OT1	Q8N9U9	137 aa		4.49	□□□□□ -1.69
CACNA1A-256	ENST00000637981	ACYP2	P14621	99 aa		4.48	□□□□□ -1.69
CACNA1A-256	ENST00000637981		A0A0A0MQY5	61 aa		4.43	□□□□□ -1.7
CACNA1A-256	ENST00000637981	SPTSSB	Q8NFR3	76 aa		4.43	□□□□□ -1.7
CACNA1A-256	ENST00000637981	CHKB-CPT1B	H3BT56	60 aa		4.41	□□□□□ -1.7
CACNA1A-256	ENST00000637981		H7BZZ5	65 aa		4.4	□□□□□ -1.71
CACNA1A-256	ENST00000637981	KRTAP20-1	Q3LI63	56 aa		4.39	□□□□□ -1.71
CACNA1A-256	ENST00000637981	CCDC179	H3BU77	68 aa		4.38	□□□□□ -1.71
CACNA1A-256	ENST00000637981	NEB	P20929	6669 aa		4.37	□□□□□ -1.71
CACNA1A-256	ENST00000637981		H0YAA0	97 aa		4.37	□□□□□ -1.71
CACNA1A-256	ENST00000637981	MUC12	Q9UKN1	5478 aa		4.35	□□□□□ -1.71
CACNA1A-256	ENST00000637981	ATP5E	P56381	51 aa	Predicted RBP	4.34	□□□□□ -1.71
CACNA1A-256	ENST00000637981	CYSTM1	Q9H1C7	97 aa		4.34	□□□□□ -1.71
CACNA1A-256	ENST00000637981		A6NN06	94 aa		4.32	□□□□□ -1.72
CACNA1A-256	ENST00000637981	CRIPT	Q9P021	101 aa		4.32	□□□□□ -1.72
CACNA1A-256	ENST00000637981	TMEM258	P61165	79 aa		4.31	□□□□□ -1.72
CACNA1A-256	ENST00000637981	COA5	Q86WW8	74 aa		4.31	□□□□□ -1.72
CACNA1A-256	ENST00000637981	ADM2	Q7Z4H4	148 aa		4.3	□□□□□ -1.72
CACNA1A-256	ENST00000637981	KRTAP5-9	P26371	169 aa		4.25	□□□□□ -1.73
CACNA1A-256	ENST00000637981	MT1B	P07438	61 aa		4.24	□□□□□ -1.73
CACNA1A-256	ENST00000637981	SEC61G	P60059	68 aa		4.23	□□□□□ -1.73
CACNA1A-256	ENST00000637981		Q5VV11	94 aa		4.23	□□□□□ -1.73
CACNA1A-256	ENST00000637981	SPRR2G	Q9BYE4	73 aa		4.22	□□□□□ -1.73
CACNA1A-256	ENST00000637981		R4GN34	69 aa		4.21	□□□□□ -1.73
CACNA1A-256	ENST00000637981		P0C880	135 aa		4.21	□□□□□ -1.74
CACNA1A-256	ENST00000637981	KRTAP10-5	P60370	271 aa		4.21	□□□□□ -1.74
CACNA1A-256	ENST00000637981	SERP1	Q9Y6X1	66 aa		4.21	□□□□□ -1.74
CACNA1A-256	ENST00000637981	KRTAP2-3	P0C7H8	128 aa		4.19	□□□□□ -1.74
CACNA1A-256	ENST00000637981	KRTAP19-8	Q3LI54	63 aa		4.19	□□□□□ -1.74
CACNA1A-256	ENST00000637981	KRTAP2-4	Q9BYR9	128 aa		4.19	□□□□□ -1.74
CACNA1A-256	ENST00000637981	RPS28	P62857	69 aa	Known RBP	4.18	□□□□□ -1.74
CACNA1A-256	ENST00000637981	MDN1	Q9NU22	5596 aa		4.17	□□□□□ -1.74
CACNA1A-256	ENST00000637981	KMT2D	O14686	5537 aa		4.17	□□□□□ -1.74
CACNA1A-256	ENST00000637981		M0QZ58	72 aa		4.17	□□□□□ -1.74
CACNA1A-256	ENST00000637981		A0A1B0GU69	56 aa		4.13	□□□□□ -1.75
CACNA1A-256	ENST00000637981	PRR15L	Q9BU68	103 aa		4.12	□□□□□ -1.75
CACNA1A-256	ENST00000637981	SPRR2E	P22531	72 aa		4.09	□□□□□ -1.75
CACNA1A-256	ENST00000637981	SPRR2B	P35325	72 aa		4.09	□□□□□ -1.75
CACNA1A-256	ENST00000637981	SPRR2A	P35326	72 aa		4.09	□□□□□ -1.75
CACNA1A-256	ENST00000637981	PLAC4	Q8WY50	150 aa		4.09	□□□□□ -1.75
CACNA1A-256	ENST00000637981		A0A1B0GU33	70 aa		4.08	□□□□□ -1.76
CACNA1A-256	ENST00000637981	LINC01554	Q52M75	96 aa		4.08	□□□□□ -1.76
CACNA1A-256	ENST00000637981	SMIM26	A0A096LP01	95 aa		4.07	□□□□□ -1.76
CACNA1A-256	ENST00000637981	SPRR2F	Q96RM1	72 aa		4.07	□□□□□ -1.76
CACNA1A-256	ENST00000637981	LINC01558	Q9Y6Z2	57 aa		4.07	□□□□□ -1.76
CACNA1A-256	ENST00000637981		V9GYY9	64 aa		4.06	□□□□□ -1.76
CACNA1A-256	ENST00000637981	KRTAP2-2	Q9BYT5	123 aa		4.04	□□□□□ -1.76
CACNA1A-256	ENST00000637981	KRTAP2-1	Q9BYU5	128 aa		4.04	□□□□□ -1.76
CACNA1A-256	ENST00000637981	PRO2289	Q9P1D8	64 aa		4	□□□□□ -1.77
CACNA1A-256	ENST00000637981	KRTAP13-4	Q3LI77	160 aa		3.99	□□□□□ -1.77
CACNA1A-256	ENST00000637981		Q1T7F1	81 aa		3.98	□□□□□ -1.77
CACNA1A-256	ENST00000637981	LCE1A	Q5T7P2	110 aa		3.98	□□□□□ -1.77
CACNA1A-256	ENST00000637981	SPATA8	Q6RVD6	105 aa		3.98	□□□□□ -1.77
CACNA1A-256	ENST00000637981	UQCR11	O14957	56 aa		3.96	□□□□□ -1.77
CACNA1A-256	ENST00000637981	KRTAP8-1	Q8IUC2	63 aa		3.96	□□□□□ -1.77
CACNA1A-256	ENST00000637981		A0A0D9SG42	100 aa		3.95	□□□□□ -1.78
CACNA1A-256	ENST00000637981	SPRR2D	P22532	72 aa		3.95	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms