RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 RBM12B-AS1Q9P1G2 102 aa4.73□□□□□ -1.65
CACNA1A-239ENST00000637297 SPINK7P58062 85 aa4.72□□□□□ -1.65
CACNA1A-239ENST00000637297 KRTAP19-2Q3LHN2 52 aa4.71□□□□□ -1.66
CACNA1A-239ENST00000637297 M0R2T5 61 aa4.69□□□□□ -1.66
CACNA1A-239ENST00000637297 CHKB-CPT1BH3BT56 60 aa4.68□□□□□ -1.66
CACNA1A-239ENST00000637297 A8MUN3 132 aa4.67□□□□□ -1.66
CACNA1A-239ENST00000637297 C4orf26Q17RF5 130 aa4.67□□□□□ -1.66
CACNA1A-239ENST00000637297 MPLKIPQ8TAP9 179 aa4.67□□□□□ -1.66
CACNA1A-239ENST00000637297 MT1HP80294 61 aa4.66□□□□□ -1.66
CACNA1A-239ENST00000637297 V9GYY9 64 aa4.66□□□□□ -1.66
CACNA1A-239ENST00000637297 Q1T7F1 81 aa4.64□□□□□ -1.67
CACNA1A-239ENST00000637297 SPTSSBQ8NFR3 76 aa4.59□□□□□ -1.67
CACNA1A-239ENST00000637297 KRTAP3-1Q9BYR8 98 aa4.57□□□□□ -1.68
CACNA1A-239ENST00000637297 LINC01558Q9Y6Z2 57 aa4.57□□□□□ -1.68
CACNA1A-239ENST00000637297 PSPHP1O15172 72 aa4.56□□□□□ -1.68
CACNA1A-239ENST00000637297 PRR15LQ9BU68 103 aa4.56□□□□□ -1.68
CACNA1A-239ENST00000637297 KRTAP10-6P60371 365 aaPredicted RBP4.55□□□□□ -1.68
CACNA1A-239ENST00000637297 FLGP20930 4061 aaPredicted RBP4.55□□□□□ -1.68
CACNA1A-239ENST00000637297 H1FX-AS1Q4G0G2 97 aa4.54□□□□□ -1.68
CACNA1A-239ENST00000637297 A0A1B0GU69 56 aa4.5□□□□□ -1.69
CACNA1A-239ENST00000637297 Q5VV11 94 aa4.5□□□□□ -1.69
CACNA1A-239ENST00000637297 SEC61GP60059 68 aa4.48□□□□□ -1.69
CACNA1A-239ENST00000637297 KRTAP9-2Q9BYQ4 174 aa4.47□□□□□ -1.69
CACNA1A-239ENST00000637297 S4R3F8 94 aa4.47□□□□□ -1.69
CACNA1A-239ENST00000637297 A6NED7 52 aa4.44□□□□□ -1.7
CACNA1A-239ENST00000637297 LCA10Q71F78 164 aa4.44□□□□□ -1.7
CACNA1A-239ENST00000637297 BRK1Q8WUW1 75 aa4.44□□□□□ -1.7
CACNA1A-239ENST00000637297 KRTAP9-8Q9BYQ0 159 aa4.43□□□□□ -1.7
CACNA1A-239ENST00000637297 KRTAP10-10P60014 251 aa4.41□□□□□ -1.7
CACNA1A-239ENST00000637297 MT2AP02795 61 aa4.39□□□□□ -1.71
CACNA1A-239ENST00000637297 CSAG1Q6PB30 78 aa4.39□□□□□ -1.71
CACNA1A-239ENST00000637297 PRO0628Q9UI54 55 aa4.38□□□□□ -1.71
CACNA1A-239ENST00000637297 UQCR11O14957 56 aa4.37□□□□□ -1.71
CACNA1A-239ENST00000637297 CDC42SE1Q9NRR8 79 aa4.36□□□□□ -1.71
CACNA1A-239ENST00000637297 H3BS24 57 aa4.35□□□□□ -1.71
CACNA1A-239ENST00000637297 MT1FP04733 61 aa4.35□□□□□ -1.71
CACNA1A-239ENST00000637297 A0A1B0GU33 70 aa4.33□□□□□ -1.72
CACNA1A-239ENST00000637297 MIR22HGQ0VDD5 57 aa4.33□□□□□ -1.72
CACNA1A-239ENST00000637297 SPATA8Q6RVD6 105 aa4.31□□□□□ -1.72
CACNA1A-239ENST00000637297 A8MU10 97 aa4.28□□□□□ -1.72
CACNA1A-239ENST00000637297 ADM2Q7Z4H4 148 aa4.28□□□□□ -1.72
CACNA1A-239ENST00000637297 KRTAP9-3Q9BYQ3 159 aa4.28□□□□□ -1.72
CACNA1A-239ENST00000637297 FSIP2Q5CZC0 6907 aa4.28□□□□□ -1.72
CACNA1A-239ENST00000637297 KRTAP9-6A0A140TA67 174 aa4.27□□□□□ -1.73
CACNA1A-239ENST00000637297 H0YAA0 97 aa4.27□□□□□ -1.73
CACNA1A-239ENST00000637297 CRCT1Q9UGL9 99 aa4.27□□□□□ -1.73
CACNA1A-239ENST00000637297 P0C880 135 aa4.23□□□□□ -1.73
CACNA1A-239ENST00000637297 PMAIP1Q13794 54 aa4.21□□□□□ -1.74
CACNA1A-239ENST00000637297 M0QZ58 72 aa4.18□□□□□ -1.74
CACNA1A-239ENST00000637297 USH2AO75445 5202 aa4.18□□□□□ -1.74
CACNA1A-239ENST00000637297 SVIPQ8NHG7 77 aa4.17□□□□□ -1.74
CACNA1A-239ENST00000637297 CRIPTQ9P021 101 aa4.17□□□□□ -1.74
CACNA1A-239ENST00000637297 K7ERS5 55 aa4.16□□□□□ -1.74
CACNA1A-239ENST00000637297 KRTAP13-4Q3LI77 160 aa4.16□□□□□ -1.74
CACNA1A-239ENST00000637297 A6NN06 94 aa4.15□□□□□ -1.75
CACNA1A-239ENST00000637297 A0A0D9SG42 100 aa4.14□□□□□ -1.75
CACNA1A-239ENST00000637297 KRTAP19-1Q8IUB9 90 aa4.14□□□□□ -1.75
CACNA1A-239ENST00000637297 R4GN34 69 aa4.13□□□□□ -1.75
CACNA1A-239ENST00000637297 SPRR2GQ9BYE4 73 aa4.12□□□□□ -1.75
CACNA1A-239ENST00000637297 SSPOA2VEC9 5147 aa4.1□□□□□ -1.75
CACNA1A-239ENST00000637297 KRTAP19-8Q3LI54 63 aa4.06□□□□□ -1.76
CACNA1A-239ENST00000637297 KRTAP19-6Q3LI70 58 aa4.06□□□□□ -1.76
CACNA1A-239ENST00000637297 LINC01554Q52M75 96 aa4.06□□□□□ -1.76
CACNA1A-239ENST00000637297 SPINT4Q6UDR6 99 aa4.05□□□□□ -1.76
CACNA1A-239ENST00000637297 KTN1-AS1Q86SY8 53 aa4.04□□□□□ -1.76
CACNA1A-239ENST00000637297 MT1BP07438 61 aa4.03□□□□□ -1.76
CACNA1A-239ENST00000637297 KRTAP12-1P59990 96 aa4.03□□□□□ -1.76
CACNA1A-239ENST00000637297 KRTAP12-2P59991 146 aa4.02□□□□□ -1.77
CACNA1A-239ENST00000637297 PLAC4Q8WY50 150 aa4.01□□□□□ -1.77
CACNA1A-239ENST00000637297 FCGBPQ9Y6R7 5405 aaPredicted RBP3.98□□□□□ -1.77
CACNA1A-239ENST00000637297 ROMO1P60602 79 aa3.97□□□□□ -1.77
CACNA1A-239ENST00000637297 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.94□□□□□ -1.78
CACNA1A-239ENST00000637297 KRTAP10-5P60370 271 aa3.92□□□□□ -1.78
CACNA1A-239ENST00000637297 PRO2289Q9P1D8 64 aa3.92□□□□□ -1.78
CACNA1A-239ENST00000637297 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
CACNA1A-239ENST00000637297 CAMK2N1Q7Z7J9 78 aa3.9□□□□□ -1.79
CACNA1A-239ENST00000637297 LOC100996750A0A140TA64 210 aa3.88□□□□□ -1.79
CACNA1A-239ENST00000637297 KRTAP4-6Q9BYQ5 205 aa3.88□□□□□ -1.79
CACNA1A-239ENST00000637297 KRTAP9-7A8MTY7 169 aa3.86□□□□□ -1.79
CACNA1A-239ENST00000637297 MACF1Q9UPN3 7388 aaKnown RBP3.85□□□□□ -1.79
CACNA1A-239ENST00000637297 KRTAP19-4Q3LI73 84 aa3.84□□□□□ -1.79
CACNA1A-239ENST00000637297 MT1XP80297 61 aa3.82□□□□□ -1.8
CACNA1A-239ENST00000637297 KRTAP25-1Q3LHN0 102 aa3.82□□□□□ -1.8
CACNA1A-239ENST00000637297 SYNE2Q8WXH0 6885 aaKnown RBP3.81□□□□□ -1.8
CACNA1A-239ENST00000637297 C10orf95Q9H7T3 257 aa3.8□□□□□ -1.8
CACNA1A-239ENST00000637297 KRTAP6-3Q3LI67 103 aa3.75□□□□□ -1.81
CACNA1A-239ENST00000637297 TNP1P09430 55 aa3.71□□□□□ -1.82
CACNA1A-239ENST00000637297 KRTAP23-1A1A580 65 aa3.67□□□□□ -1.82
CACNA1A-239ENST00000637297 KRTAP10-7P60409 375 aaPredicted RBP3.67□□□□□ -1.82
CACNA1A-239ENST00000637297 KRTAP4-8Q9BYQ9 185 aa3.67□□□□□ -1.82
CACNA1A-239ENST00000637297 PP632Q6XCG6 107 aa3.66□□□□□ -1.82
CACNA1A-239ENST00000637297 KRTAP8-1Q8IUC2 63 aa3.66□□□□□ -1.82
CACNA1A-239ENST00000637297 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
CACNA1A-239ENST00000637297 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
CACNA1A-239ENST00000637297 KMT2DO14686 5537 aa3.63□□□□□ -1.83
CACNA1A-239ENST00000637297 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
CACNA1A-239ENST00000637297 KRTAP4-8A0A0G2JLE6 195 aa3.62□□□□□ -1.83
CACNA1A-239ENST00000637297 SPRR2FQ96RM1 72 aa3.61□□□□□ -1.83
CACNA1A-239ENST00000637297 MUC12Q9UKN1 5478 aa3.56□□□□□ -1.84
CACNA1A-239ENST00000637297 SPRR2EP22531 72 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms