RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 NDUFC1O43677 76 aa7.06□□□□□ -1.28
CACNA1A-230ENST00000636768 KLKP1Q107X0 134 aa7.06□□□□□ -1.28
CACNA1A-230ENST00000636768 KRTAP19-6Q3LI70 58 aa7.03□□□□□ -1.28
CACNA1A-230ENST00000636768 CYSTM1Q9H1C7 97 aa7.03□□□□□ -1.28
CACNA1A-230ENST00000636768 OCR1Q9BZK8 76 aa7.02□□□□□ -1.29
CACNA1A-230ENST00000636768 H7BZZ5 65 aa6.98□□□□□ -1.29
CACNA1A-230ENST00000636768 ATP5EP56381 51 aaPredicted RBP6.98□□□□□ -1.29
CACNA1A-230ENST00000636768 C5orf47Q569G3 176 aa6.97□□□□□ -1.29
CACNA1A-230ENST00000636768 SNURFQ9Y675 71 aa6.97□□□□□ -1.29
CACNA1A-230ENST00000636768 TP53AIP1Q9HCN2 124 aa6.95□□□□□ -1.3
CACNA1A-230ENST00000636768 S4R3F8 94 aa6.94□□□□□ -1.3
CACNA1A-230ENST00000636768 C1orf64Q8NEQ6 169 aa6.93□□□□□ -1.3
CACNA1A-230ENST00000636768 MACF1Q9UPN3 7388 aaKnown RBP6.92□□□□□ -1.3
CACNA1A-230ENST00000636768 KRTAP3-1Q9BYR8 98 aa6.92□□□□□ -1.3
CACNA1A-230ENST00000636768 SERP1Q9Y6X1 66 aa6.92□□□□□ -1.3
CACNA1A-230ENST00000636768 CSAG1Q6PB30 78 aa6.89□□□□□ -1.31
CACNA1A-230ENST00000636768 MP68P56378 58 aa6.87□□□□□ -1.31
CACNA1A-230ENST00000636768 LCA10Q71F78 164 aa6.87□□□□□ -1.31
CACNA1A-230ENST00000636768 H3BPC8 53 aa6.85□□□□□ -1.31
CACNA1A-230ENST00000636768 SYNE2Q8WXH0 6885 aaKnown RBP6.82□□□□□ -1.32
CACNA1A-230ENST00000636768 SMIM26A0A096LP01 95 aa6.8□□□□□ -1.32
CACNA1A-230ENST00000636768 TRAV22A0A0B4J277 110 aa6.8□□□□□ -1.32
CACNA1A-230ENST00000636768 CYP4F30PQ9H0H9 118 aa6.8□□□□□ -1.32
CACNA1A-230ENST00000636768 LOC101927531A0A1B0GV80 90 aa6.77□□□□□ -1.33
CACNA1A-230ENST00000636768 H0Y9P7 68 aa6.77□□□□□ -1.33
CACNA1A-230ENST00000636768 Q5VV11 94 aa6.77□□□□□ -1.33
CACNA1A-230ENST00000636768 LINC00208Q96KT6 92 aa6.75□□□□□ -1.33
CACNA1A-230ENST00000636768 SPRR2GQ9BYE4 73 aa6.75□□□□□ -1.33
CACNA1A-230ENST00000636768 A6NN06 94 aa6.73□□□□□ -1.33
CACNA1A-230ENST00000636768 MT1BP07438 61 aa6.73□□□□□ -1.33
CACNA1A-230ENST00000636768 KRTAP6-3Q3LI67 103 aa6.73□□□□□ -1.33
CACNA1A-230ENST00000636768 KRTAP3-3Q9BYR6 98 aa6.73□□□□□ -1.33
CACNA1A-230ENST00000636768 SPANXA2-OT1Q8N9U9 137 aa6.72□□□□□ -1.33
CACNA1A-230ENST00000636768 KRTAP19-8Q3LI54 63 aa6.71□□□□□ -1.34
CACNA1A-230ENST00000636768 SVIPQ8NHG7 77 aa6.71□□□□□ -1.34
CACNA1A-230ENST00000636768 CRIPTQ9P021 101 aa6.64□□□□□ -1.35
CACNA1A-230ENST00000636768 KRTAP10-5P60370 271 aa6.6□□□□□ -1.35
CACNA1A-230ENST00000636768 KRTAP3-2Q9BYR7 98 aa6.59□□□□□ -1.35
CACNA1A-230ENST00000636768 V9GYY9 64 aa6.58□□□□□ -1.36
CACNA1A-230ENST00000636768 A8MUN3 132 aa6.57□□□□□ -1.36
CACNA1A-230ENST00000636768 Q1T7F1 81 aa6.57□□□□□ -1.36
CACNA1A-230ENST00000636768 H0YAA0 97 aa6.56□□□□□ -1.36
CACNA1A-230ENST00000636768 ADM2Q7Z4H4 148 aa6.51□□□□□ -1.37
CACNA1A-230ENST00000636768 COA5Q86WW8 74 aa6.49□□□□□ -1.37
CACNA1A-230ENST00000636768 PRO0628Q9UI54 55 aa6.45□□□□□ -1.38
CACNA1A-230ENST00000636768 NEBP20929 6669 aa6.44□□□□□ -1.38
CACNA1A-230ENST00000636768 ACYP2P14621 99 aa6.41□□□□□ -1.38
CACNA1A-230ENST00000636768 BRK1Q8WUW1 75 aa6.4□□□□□ -1.38
CACNA1A-230ENST00000636768 PSPHP1O15172 72 aa6.39□□□□□ -1.39
CACNA1A-230ENST00000636768 KRTAP5-9P26371 169 aa6.38□□□□□ -1.39
CACNA1A-230ENST00000636768 PRO2289Q9P1D8 64 aa6.37□□□□□ -1.39
CACNA1A-230ENST00000636768 R4GN34 69 aa6.37□□□□□ -1.39
CACNA1A-230ENST00000636768 MUC12Q9UKN1 5478 aa6.36□□□□□ -1.39
CACNA1A-230ENST00000636768 PLAC4Q8WY50 150 aa6.36□□□□□ -1.39
CACNA1A-230ENST00000636768 DMAC1Q96GE9 116 aa6.36□□□□□ -1.39
CACNA1A-230ENST00000636768 LINC01558Q9Y6Z2 57 aa6.36□□□□□ -1.39
CACNA1A-230ENST00000636768 PRR15LQ9BU68 103 aa6.35□□□□□ -1.39
CACNA1A-230ENST00000636768 CHKB-CPT1BH3BT56 60 aa6.33□□□□□ -1.4
CACNA1A-230ENST00000636768 P0C880 135 aa6.33□□□□□ -1.4
CACNA1A-230ENST00000636768 M0QZ58 72 aa6.31□□□□□ -1.4
CACNA1A-230ENST00000636768 MT1XP80297 61 aa6.31□□□□□ -1.4
CACNA1A-230ENST00000636768 KRTAP20-1Q3LI63 56 aa6.28□□□□□ -1.4
CACNA1A-230ENST00000636768 KMT2DO14686 5537 aa6.28□□□□□ -1.4
CACNA1A-230ENST00000636768 LINC01554Q52M75 96 aa6.24□□□□□ -1.41
CACNA1A-230ENST00000636768 A6NED7 52 aa6.23□□□□□ -1.41
CACNA1A-230ENST00000636768 SPRR2FQ96RM1 72 aa6.22□□□□□ -1.41
CACNA1A-230ENST00000636768 MDN1Q9NU22 5596 aa6.22□□□□□ -1.41
CACNA1A-230ENST00000636768 KRTAP8-1Q8IUC2 63 aa6.18□□□□□ -1.42
CACNA1A-230ENST00000636768 CDC42SE1Q9NRR8 79 aa6.18□□□□□ -1.42
CACNA1A-230ENST00000636768 SPTSSBQ8NFR3 76 aa6.17□□□□□ -1.42
CACNA1A-230ENST00000636768 A0A1B0GU69 56 aa6.16□□□□□ -1.42
CACNA1A-230ENST00000636768 KRTAP12-2P59991 146 aa6.16□□□□□ -1.42
CACNA1A-230ENST00000636768 SPRR2EP22531 72 aa6.15□□□□□ -1.42
CACNA1A-230ENST00000636768 SPRR2BP35325 72 aa6.15□□□□□ -1.42
CACNA1A-230ENST00000636768 SPRR2AP35326 72 aa6.15□□□□□ -1.42
CACNA1A-230ENST00000636768 KRTAP2-3P0C7H8 128 aa6.08□□□□□ -1.44
CACNA1A-230ENST00000636768 PMAIP1Q13794 54 aa6.08□□□□□ -1.44
CACNA1A-230ENST00000636768 KRTAP2-4Q9BYR9 128 aa6.08□□□□□ -1.44
CACNA1A-230ENST00000636768 SEC61GP60059 68 aa6.07□□□□□ -1.44
CACNA1A-230ENST00000636768 KRTAP4-8A0A0G2JLE6 195 aa6.05□□□□□ -1.44
CACNA1A-230ENST00000636768 A8MU10 97 aa6.05□□□□□ -1.44
CACNA1A-230ENST00000636768 KRTAP4-8Q9BYQ9 185 aa6.05□□□□□ -1.44
CACNA1A-230ENST00000636768 UQCR11O14957 56 aa6.04□□□□□ -1.44
CACNA1A-230ENST00000636768 LCE1AQ5T7P2 110 aa6.03□□□□□ -1.44
CACNA1A-230ENST00000636768 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.45
CACNA1A-230ENST00000636768 SPATA8Q6RVD6 105 aa6.02□□□□□ -1.45
CACNA1A-230ENST00000636768 MIR22HGQ0VDD5 57 aa5.99□□□□□ -1.45
CACNA1A-230ENST00000636768 KRTAP10-12P60413 245 aa5.98□□□□□ -1.45
CACNA1A-230ENST00000636768 SPRR2DP22532 72 aa5.95□□□□□ -1.46
CACNA1A-230ENST00000636768 KTN1-AS1Q86SY8 53 aa5.93□□□□□ -1.46
CACNA1A-230ENST00000636768 KRTAP2-2Q9BYT5 123 aa5.89□□□□□ -1.47
CACNA1A-230ENST00000636768 KRTAP2-1Q9BYU5 128 aa5.89□□□□□ -1.47
CACNA1A-230ENST00000636768 KRTAP13-4Q3LI77 160 aa5.88□□□□□ -1.47
CACNA1A-230ENST00000636768 A0A1B0GU33 70 aa5.86□□□□□ -1.47
CACNA1A-230ENST00000636768 CAMK2N1Q7Z7J9 78 aa5.86□□□□□ -1.47
CACNA1A-230ENST00000636768 LCE3BQ5TA77 95 aa5.77□□□□□ -1.49
CACNA1A-230ENST00000636768 A0A0D9SG42 100 aa5.75□□□□□ -1.49
CACNA1A-230ENST00000636768 K7ERS5 55 aa5.73□□□□□ -1.49
CACNA1A-230ENST00000636768 SPINT4Q6UDR6 99 aa5.67□□□□□ -1.5
CACNA1A-230ENST00000636768 H3BS24 57 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms