RNA–Protein interactions for RNA: ENST00000636410.1

CHD2-224, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-224ENST00000636410 SNURFQ9Y675 71 aa2.52□□□□□ -2.01
CHD2-224ENST00000636410 COX7CP15954 63 aa2.51□□□□□ -2.01
CHD2-224ENST00000636410 KRTAP10-10P60014 251 aa2.51□□□□□ -2.01
CHD2-224ENST00000636410 KRTAP3-3Q9BYR6 98 aa2.51□□□□□ -2.01
CHD2-224ENST00000636410 NDUFC1O43677 76 aa2.5□□□□□ -2.01
CHD2-224ENST00000636410 SPANXA2-OT1Q8N9U9 137 aa2.49□□□□□ -2.01
CHD2-224ENST00000636410 ANAPC13Q9BS18 74 aa2.48□□□□□ -2.01
CHD2-224ENST00000636410 ACYP2P14621 99 aa2.47□□□□□ -2.01
CHD2-224ENST00000636410 KRTAP9-3Q9BYQ3 159 aa2.47□□□□□ -2.01
CHD2-224ENST00000636410 H0YAA0 97 aa2.46□□□□□ -2.02
CHD2-224ENST00000636410 USH2AO75445 5202 aa2.44□□□□□ -2.02
CHD2-224ENST00000636410 CHKB-CPT1BH3BT56 60 aa2.44□□□□□ -2.02
CHD2-224ENST00000636410 H7BZZ5 65 aa2.44□□□□□ -2.02
CHD2-224ENST00000636410 LCE2BO14633 110 aa2.44□□□□□ -2.02
CHD2-224ENST00000636410 CYSTM1Q9H1C7 97 aa2.44□□□□□ -2.02
CHD2-224ENST00000636410 SPTSSBQ8NFR3 76 aa2.43□□□□□ -2.02
CHD2-224ENST00000636410 CCDC179H3BU77 68 aa2.42□□□□□ -2.02
CHD2-224ENST00000636410 ADM2Q7Z4H4 148 aa2.42□□□□□ -2.02
CHD2-224ENST00000636410 CRIPTQ9P021 101 aa2.42□□□□□ -2.02
CHD2-224ENST00000636410 CRCT1Q9UGL9 99 aa2.42□□□□□ -2.02
CHD2-224ENST00000636410 FSIP2Q5CZC0 6907 aa2.41□□□□□ -2.02
CHD2-224ENST00000636410 KRTAP9-6A0A140TA67 174 aa2.41□□□□□ -2.02
CHD2-224ENST00000636410 COA5Q86WW8 74 aa2.41□□□□□ -2.02
CHD2-224ENST00000636410 KRTAP19-1Q8IUB9 90 aa2.41□□□□□ -2.02
CHD2-224ENST00000636410 SPRR2GQ9BYE4 73 aa2.41□□□□□ -2.02
CHD2-224ENST00000636410 SSPOA2VEC9 5147 aa2.4□□□□□ -2.03
CHD2-224ENST00000636410 ATP5EP56381 51 aaPredicted RBP2.38□□□□□ -2.03
CHD2-224ENST00000636410 KRTAP3-2Q9BYR7 98 aa2.38□□□□□ -2.03
CHD2-224ENST00000636410 P0C880 135 aa2.37□□□□□ -2.03
CHD2-224ENST00000636410 KRTAP19-8Q3LI54 63 aa2.37□□□□□ -2.03
CHD2-224ENST00000636410 TMEM258P61165 79 aa2.36□□□□□ -2.03
CHD2-224ENST00000636410 Q5VV11 94 aa2.36□□□□□ -2.03
CHD2-224ENST00000636410 R4GN34 69 aa2.36□□□□□ -2.03
CHD2-224ENST00000636410 MT1BP07438 61 aa2.35□□□□□ -2.03
CHD2-224ENST00000636410 M0QZ58 72 aa2.34□□□□□ -2.03
CHD2-224ENST00000636410 KRTAP19-6Q3LI70 58 aa2.34□□□□□ -2.03
CHD2-224ENST00000636410 SEC61GP60059 68 aa2.32□□□□□ -2.04
CHD2-224ENST00000636410 FCGBPQ9Y6R7 5405 aaPredicted RBP2.31□□□□□ -2.04
CHD2-224ENST00000636410 SERP1Q9Y6X1 66 aa2.3□□□□□ -2.04
CHD2-224ENST00000636410 LINC01554Q52M75 96 aa2.29□□□□□ -2.04
CHD2-224ENST00000636410 A0A1B0GU69 56 aa2.28□□□□□ -2.04
CHD2-224ENST00000636410 A6NN06 94 aa2.28□□□□□ -2.04
CHD2-224ENST00000636410 KRTAP10-5P60370 271 aa2.28□□□□□ -2.04
CHD2-224ENST00000636410 PLAC4Q8WY50 150 aa2.28□□□□□ -2.04
CHD2-224ENST00000636410 PCP4P48539 62 aa2.27□□□□□ -2.05
CHD2-224ENST00000636410 KRTAP13-4Q3LI77 160 aa2.27□□□□□ -2.05
CHD2-224ENST00000636410 A0A1B0GU33 70 aa2.26□□□□□ -2.05
CHD2-224ENST00000636410 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.25□□□□□ -2.05
CHD2-224ENST00000636410 PRR15LQ9BU68 103 aa2.25□□□□□ -2.05
CHD2-224ENST00000636410 PRO2289Q9P1D8 64 aa2.25□□□□□ -2.05
CHD2-224ENST00000636410 LINC01558Q9Y6Z2 57 aa2.25□□□□□ -2.05
CHD2-224ENST00000636410 MT1XP80297 61 aa2.23□□□□□ -2.05
CHD2-224ENST00000636410 SPATA8Q6RVD6 105 aa2.23□□□□□ -2.05
CHD2-224ENST00000636410 MACF1Q9UPN3 7388 aaKnown RBP2.22□□□□□ -2.05
CHD2-224ENST00000636410 A0A0D9SG42 100 aa2.21□□□□□ -2.06
CHD2-224ENST00000636410 SMIM26A0A096LP01 95 aa2.2□□□□□ -2.06
CHD2-224ENST00000636410 V9GYY9 64 aa2.2□□□□□ -2.06
CHD2-224ENST00000636410 SYNE2Q8WXH0 6885 aaKnown RBP2.2□□□□□ -2.06
CHD2-224ENST00000636410 KRTAP9-7A8MTY7 169 aa2.19□□□□□ -2.06
CHD2-224ENST00000636410 Q1T7F1 81 aa2.19□□□□□ -2.06
CHD2-224ENST00000636410 A8MU10 97 aa2.18□□□□□ -2.06
CHD2-224ENST00000636410 UQCR11O14957 56 aa2.18□□□□□ -2.06
CHD2-224ENST00000636410 KRTAP12-1P59990 96 aa2.18□□□□□ -2.06
CHD2-224ENST00000636410 RPS28P62857 69 aaKnown RBP2.18□□□□□ -2.06
CHD2-224ENST00000636410 CAMK2N1Q7Z7J9 78 aa2.18□□□□□ -2.06
CHD2-224ENST00000636410 KRTAP12-2P59991 146 aa2.17□□□□□ -2.06
CHD2-224ENST00000636410 SPINT4Q6UDR6 99 aa2.17□□□□□ -2.06
CHD2-224ENST00000636410 PSPHP1O15172 72 aa2.16□□□□□ -2.06
CHD2-224ENST00000636410 KRTAP6-3Q3LI67 103 aa2.15□□□□□ -2.07
CHD2-224ENST00000636410 MIR22HGQ0VDD5 57 aa2.14□□□□□ -2.07
CHD2-224ENST00000636410 KRTAP10-7P60409 375 aaPredicted RBP2.13□□□□□ -2.07
CHD2-224ENST00000636410 KRTAP10-12P60413 245 aa2.13□□□□□ -2.07
CHD2-224ENST00000636410 KMT2DO14686 5537 aa2.12□□□□□ -2.07
CHD2-224ENST00000636410 A6NED7 52 aa2.1□□□□□ -2.07
CHD2-224ENST00000636410 KRTAP5-9P26371 169 aa2.1□□□□□ -2.07
CHD2-224ENST00000636410 KRTAP8-1Q8IUC2 63 aa2.1□□□□□ -2.07
CHD2-224ENST00000636410 KRTAP4-8A0A0G2JLE6 195 aa2.08□□□□□ -2.08
CHD2-224ENST00000636410 K7ERS5 55 aa2.08□□□□□ -2.08
CHD2-224ENST00000636410 KRTAP4-8Q9BYQ9 185 aa2.08□□□□□ -2.08
CHD2-224ENST00000636410 MUC12Q9UKN1 5478 aa2.07□□□□□ -2.08
CHD2-224ENST00000636410 SPRR2FQ96RM1 72 aa2.06□□□□□ -2.08
CHD2-224ENST00000636410 C10orf95Q9H7T3 257 aa2.06□□□□□ -2.08
CHD2-224ENST00000636410 TNP1P09430 55 aa2.05□□□□□ -2.08
CHD2-224ENST00000636410 NEBP20929 6669 aa2.04□□□□□ -2.08
CHD2-224ENST00000636410 CDC42SE1Q9NRR8 79 aa2.04□□□□□ -2.08
CHD2-224ENST00000636410 MDN1Q9NU22 5596 aa2.02□□□□□ -2.09
CHD2-224ENST00000636410 SPRR2EP22531 72 aa2□□□□□ -2.09
CHD2-224ENST00000636410 SPRR2BP35325 72 aa2□□□□□ -2.09
CHD2-224ENST00000636410 SPRR2AP35326 72 aa2□□□□□ -2.09
CHD2-224ENST00000636410 KRTAP19-7Q3SYF9 63 aa2□□□□□ -2.09
CHD2-224ENST00000636410 KRTAP25-1Q3LHN0 102 aa1.99□□□□□ -2.09
CHD2-224ENST00000636410 LCE1AQ5T7P2 110 aa1.99□□□□□ -2.09
CHD2-224ENST00000636410 LCE3AQ5TA76 89 aa1.99□□□□□ -2.09
CHD2-224ENST00000636410 MT1EP04732 61 aa1.97□□□□□ -2.09
CHD2-224ENST00000636410 KRTAP19-5Q3LI72 72 aa1.97□□□□□ -2.09
CHD2-224ENST00000636410 ROMO1P60602 79 aa1.96□□□□□ -2.1
CHD2-224ENST00000636410 SPRR2DP22532 72 aa1.94□□□□□ -2.1
CHD2-224ENST00000636410 BRK1Q8WUW1 75 aa1.94□□□□□ -2.1
CHD2-224ENST00000636410 KRTAP23-1A1A580 65 aa1.93□□□□□ -2.1
CHD2-224ENST00000636410 KRTAP20-1Q3LI63 56 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms