RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 RPL37P61927 97 aaKnown RBP10.58□□□□□ -0.72
CLN8-208ENST00000635751 A0A1B0GU69 56 aa10.55□□□□□ -0.72
CLN8-208ENST00000635751 ATP11AUNQ6ZP68 121 aa10.53□□□□□ -0.72
CLN8-208ENST00000635751 SPTSSBQ8NFR3 76 aa10.49□□□□□ -0.73
CLN8-208ENST00000635751 PMAIP1Q13794 54 aa10.47□□□□□ -0.73
CLN8-208ENST00000635751 MUC17Q685J3 4493 aa10.45□□□□□ -0.74
CLN8-208ENST00000635751 SEC61BP60468 96 aaKnown RBP10.44□□□□□ -0.74
CLN8-208ENST00000635751 KRTAP3-1Q9BYR8 98 aa10.37□□□□□ -0.75
CLN8-208ENST00000635751 UBR4Q5T4S7 5183 aa10.34□□□□□ -0.75
CLN8-208ENST00000635751 UQCR11O14957 56 aa10.33□□□□□ -0.76
CLN8-208ENST00000635751 A6NN06 94 aa10.33□□□□□ -0.76
CLN8-208ENST00000635751 SEC61GP60059 68 aa10.31□□□□□ -0.76
CLN8-208ENST00000635751 SPATA8Q6RVD6 105 aa10.31□□□□□ -0.76
CLN8-208ENST00000635751 COX6B2Q6YFQ2 88 aa10.3□□□□□ -0.76
CLN8-208ENST00000635751 KRTAP4-1Q9BYQ7 146 aa10.28□□□□□ -0.76
CLN8-208ENST00000635751 MIR22HGQ0VDD5 57 aa10.28□□□□□ -0.76
CLN8-208ENST00000635751 MUC2Q02817 5179 aa10.23□□□□□ -0.77
CLN8-208ENST00000635751 KTN1-AS1Q86SY8 53 aa10.22□□□□□ -0.77
CLN8-208ENST00000635751 RNF213Q63HN8 5207 aa10.2□□□□□ -0.78
CLN8-208ENST00000635751 A0A1B0GU33 70 aa10.04□□□□□ -0.8
CLN8-208ENST00000635751 H1FX-AS1Q4G0G2 97 aa10.02□□□□□ -0.81
CLN8-208ENST00000635751 H0YAA0 97 aa10□□□□□ -0.81
CLN8-208ENST00000635751 RBM12B-AS1Q9P1G2 102 aa9.98□□□□□ -0.81
CLN8-208ENST00000635751 KRTAP3-3Q9BYR6 98 aa9.96□□□□□ -0.81
CLN8-208ENST00000635751 S4R3F8 94 aa9.96□□□□□ -0.82
CLN8-208ENST00000635751 KRTAP19-2Q3LHN2 52 aa9.92□□□□□ -0.82
CLN8-208ENST00000635751 LCE2CQ5TA81 110 aa9.84□□□□□ -0.83
CLN8-208ENST00000635751 FAT4Q6V0I7 4981 aa9.83□□□□□ -0.84
CLN8-208ENST00000635751 KRTAP10-6P60371 365 aaPredicted RBP9.8□□□□□ -0.84
CLN8-208ENST00000635751 FLGP20930 4061 aaPredicted RBP9.77□□□□□ -0.85
CLN8-208ENST00000635751 ADM2Q7Z4H4 148 aa9.77□□□□□ -0.85
CLN8-208ENST00000635751 PRAC1Q96KF2 57 aa9.76□□□□□ -0.85
CLN8-208ENST00000635751 KRTAP3-2Q9BYR7 98 aa9.76□□□□□ -0.85
CLN8-208ENST00000635751 K7ERS5 55 aa9.69□□□□□ -0.86
CLN8-208ENST00000635751 MT1HP80294 61 aa9.66□□□□□ -0.86
CLN8-208ENST00000635751 CSAG1Q6PB30 78 aa9.64□□□□□ -0.87
CLN8-208ENST00000635751 P0C880 135 aa9.63□□□□□ -0.87
CLN8-208ENST00000635751 KRTAP13-4Q3LI77 160 aa9.63□□□□□ -0.87
CLN8-208ENST00000635751 M0R2T5 61 aa9.56□□□□□ -0.88
CLN8-208ENST00000635751 A0A0D9SG42 100 aa9.54□□□□□ -0.88
CLN8-208ENST00000635751 LCE2AQ5TA79 106 aaPredicted RBP9.52□□□□□ -0.89
CLN8-208ENST00000635751 M0QZ58 72 aa9.41□□□□□ -0.9
CLN8-208ENST00000635751 LINC01554Q52M75 96 aa9.41□□□□□ -0.9
CLN8-208ENST00000635751 ROMO1P60602 79 aa9.4□□□□□ -0.91
CLN8-208ENST00000635751 KRTAP25-1Q3LHN0 102 aa9.36□□□□□ -0.91
CLN8-208ENST00000635751 KRTAP12-2P59991 146 aa9.32□□□□□ -0.92
CLN8-208ENST00000635751 LORP23490 312 aaPredicted RBP9.31□□□□□ -0.92
CLN8-208ENST00000635751 KRTAP12-1P59990 96 aa9.29□□□□□ -0.92
CLN8-208ENST00000635751 SPINT4Q6UDR6 99 aa9.26□□□□□ -0.93
CLN8-208ENST00000635751 KRTAP9-8Q9BYQ0 159 aa9.26□□□□□ -0.93
CLN8-208ENST00000635751 CRIPTQ9P021 101 aa9.21□□□□□ -0.94
CLN8-208ENST00000635751 R4GN34 69 aa9.21□□□□□ -0.94
CLN8-208ENST00000635751 MT2AP02795 61 aa9.19□□□□□ -0.94
CLN8-208ENST00000635751 MT1FP04733 61 aa9.14□□□□□ -0.95
CLN8-208ENST00000635751 KRTAP10-10P60014 251 aa9.12□□□□□ -0.95
CLN8-208ENST00000635751 C10orf95Q9H7T3 257 aa8.96□□□□□ -0.98
CLN8-208ENST00000635751 KRTAP9-3Q9BYQ3 159 aa8.94□□□□□ -0.98
CLN8-208ENST00000635751 KRTAP19-1Q8IUB9 90 aa8.85□□□□□ -0.99
CLN8-208ENST00000635751 SPRR2GQ9BYE4 73 aa8.83□□□□□ -1
CLN8-208ENST00000635751 LCE2DQ5TA82 110 aaPredicted RBP8.76□□□□□ -1.01
CLN8-208ENST00000635751 LCE2BO14633 110 aa8.75□□□□□ -1.01
CLN8-208ENST00000635751 CAMK2N1Q7Z7J9 78 aa8.7□□□□□ -1.02
CLN8-208ENST00000635751 KRTAP19-8Q3LI54 63 aa8.64□□□□□ -1.03
CLN8-208ENST00000635751 KRTAP9-2Q9BYQ4 174 aa8.63□□□□□ -1.03
CLN8-208ENST00000635751 USH2AO75445 5202 aa8.62□□□□□ -1.03
CLN8-208ENST00000635751 MT1BP07438 61 aa8.57□□□□□ -1.04
CLN8-208ENST00000635751 FSIP2Q5CZC0 6907 aa8.48□□□□□ -1.05
CLN8-208ENST00000635751 PLAC4Q8WY50 150 aa8.47□□□□□ -1.05
CLN8-208ENST00000635751 KRTAP15-1Q3LI76 137 aa8.46□□□□□ -1.06
CLN8-208ENST00000635751 PP632Q6XCG6 107 aa8.46□□□□□ -1.06
CLN8-208ENST00000635751 SSPOA2VEC9 5147 aa8.41□□□□□ -1.06
CLN8-208ENST00000635751 TNP1P09430 55 aa8.38□□□□□ -1.07
CLN8-208ENST00000635751 KRTAP19-6Q3LI70 58 aa8.28□□□□□ -1.08
CLN8-208ENST00000635751 KRTAP23-1A1A580 65 aa8.27□□□□□ -1.09
CLN8-208ENST00000635751 CRCT1Q9UGL9 99 aa8.26□□□□□ -1.09
CLN8-208ENST00000635751 KRTAP9-6A0A140TA67 174 aa8.24□□□□□ -1.09
CLN8-208ENST00000635751 MT1XP80297 61 aa8.22□□□□□ -1.09
CLN8-208ENST00000635751 KRTAP10-5P60370 271 aa8.2□□□□□ -1.1
CLN8-208ENST00000635751 PRO2289Q9P1D8 64 aa8.15□□□□□ -1.1
CLN8-208ENST00000635751 H3BS24 57 aa8.14□□□□□ -1.11
CLN8-208ENST00000635751 FCGBPQ9Y6R7 5405 aaPredicted RBP8.11□□□□□ -1.11
CLN8-208ENST00000635751 NDUFAF8A1L188 74 aa8.1□□□□□ -1.11
CLN8-208ENST00000635751 LCE3AQ5TA76 89 aa7.92□□□□□ -1.14
CLN8-208ENST00000635751 KRTAP10-7P60409 375 aaPredicted RBP7.89□□□□□ -1.15
CLN8-208ENST00000635751 LUZP6Q538Z0 58 aa7.82□□□□□ -1.16
CLN8-208ENST00000635751 KRTAP10-12P60413 245 aa7.8□□□□□ -1.16
CLN8-208ENST00000635751 KMT2DO14686 5537 aa7.76□□□□□ -1.17
CLN8-208ENST00000635751 KRTAP8-1Q8IUC2 63 aa7.76□□□□□ -1.17
CLN8-208ENST00000635751 SPRR5A0A1B0GTR4 108 aa7.75□□□□□ -1.17
CLN8-208ENST00000635751 MACF1Q9UPN3 7388 aaKnown RBP7.73□□□□□ -1.17
CLN8-208ENST00000635751 KRTAP4-8A0A0G2JLE6 195 aa7.68□□□□□ -1.18
CLN8-208ENST00000635751 KRTAP4-8Q9BYQ9 185 aa7.68□□□□□ -1.18
CLN8-208ENST00000635751 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.66□□□□□ -1.18
CLN8-208ENST00000635751 KRTAP12-3P60328 96 aa7.58□□□□□ -1.2
CLN8-208ENST00000635751 SYNE2Q8WXH0 6885 aaKnown RBP7.56□□□□□ -1.2
CLN8-208ENST00000635751 KRTAP6-3Q3LI67 103 aa7.38□□□□□ -1.23
CLN8-208ENST00000635751 KRTAP19-5Q3LI72 72 aa7.36□□□□□ -1.23
CLN8-208ENST00000635751 KRTAP9-7A8MTY7 169 aa7.35□□□□□ -1.23
CLN8-208ENST00000635751 KRTAP5-9P26371 169 aa7.34□□□□□ -1.23
CLN8-208ENST00000635751 SPRR2FQ96RM1 72 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 189 ms