RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 H0Y9P7 68 aa8.48□□□□□ -1.05
CLN6-210ENST00000635747 CSAG1Q6PB30 78 aa8.46□□□□□ -1.06
CLN6-210ENST00000635747 MP68P56378 58 aa8.45□□□□□ -1.06
CLN6-210ENST00000635747 H3BPC8 53 aa8.44□□□□□ -1.06
CLN6-210ENST00000635747 CYP4F30PQ9H0H9 118 aa8.44□□□□□ -1.06
CLN6-210ENST00000635747 TRAV7A0A075B6U4 112 aa8.42□□□□□ -1.06
CLN6-210ENST00000635747 LCA10Q71F78 164 aa8.41□□□□□ -1.06
CLN6-210ENST00000635747 LINC00208Q96KT6 92 aa8.38□□□□□ -1.07
CLN6-210ENST00000635747 MACF1Q9UPN3 7388 aaKnown RBP8.31□□□□□ -1.08
CLN6-210ENST00000635747 SERP2Q8N6R1 65 aa8.31□□□□□ -1.08
CLN6-210ENST00000635747 KRTAP3-3Q9BYR6 98 aa8.27□□□□□ -1.09
CLN6-210ENST00000635747 SPRR2GQ9BYE4 73 aa8.26□□□□□ -1.09
CLN6-210ENST00000635747 KLKP1Q107X0 134 aa8.24□□□□□ -1.09
CLN6-210ENST00000635747 Q5VV11 94 aa8.23□□□□□ -1.09
CLN6-210ENST00000635747 A8MUN3 132 aa8.2□□□□□ -1.1
CLN6-210ENST00000635747 COX7CP15954 63 aa8.19□□□□□ -1.1
CLN6-210ENST00000635747 KRTAP19-8Q3LI54 63 aa8.19□□□□□ -1.1
CLN6-210ENST00000635747 NDUFC1O43677 76 aa8.18□□□□□ -1.1
CLN6-210ENST00000635747 CRIPTQ9P021 101 aa8.18□□□□□ -1.1
CLN6-210ENST00000635747 MT1BP07438 61 aa8.17□□□□□ -1.1
CLN6-210ENST00000635747 C20orf197Q8N268 126 aa8.16□□□□□ -1.1
CLN6-210ENST00000635747 SYNE2Q8WXH0 6885 aaKnown RBP8.15□□□□□ -1.1
CLN6-210ENST00000635747 A6NN06 94 aa8.14□□□□□ -1.11
CLN6-210ENST00000635747 ANAPC13Q9BS18 74 aa8.13□□□□□ -1.11
CLN6-210ENST00000635747 SNURFQ9Y675 71 aa8.13□□□□□ -1.11
CLN6-210ENST00000635747 H0YAA0 97 aa8.1□□□□□ -1.11
CLN6-210ENST00000635747 KRTAP6-3Q3LI67 103 aa8.1□□□□□ -1.11
CLN6-210ENST00000635747 DMAC1Q96GE9 116 aa8.09□□□□□ -1.11
CLN6-210ENST00000635747 SPANXA2-OT1Q8N9U9 137 aa8.06□□□□□ -1.12
CLN6-210ENST00000635747 KRTAP10-5P60370 271 aa8.02□□□□□ -1.13
CLN6-210ENST00000635747 ACYP2P14621 99 aa7.98□□□□□ -1.13
CLN6-210ENST00000635747 ADM2Q7Z4H4 148 aa7.97□□□□□ -1.13
CLN6-210ENST00000635747 H7BZZ5 65 aa7.94□□□□□ -1.14
CLN6-210ENST00000635747 CCDC179H3BU77 68 aa7.91□□□□□ -1.14
CLN6-210ENST00000635747 CYSTM1Q9H1C7 97 aa7.91□□□□□ -1.14
CLN6-210ENST00000635747 SPTSSBQ8NFR3 76 aa7.82□□□□□ -1.16
CLN6-210ENST00000635747 CHKB-CPT1BH3BT56 60 aa7.81□□□□□ -1.16
CLN6-210ENST00000635747 R4GN34 69 aa7.81□□□□□ -1.16
CLN6-210ENST00000635747 PLAC4Q8WY50 150 aa7.79□□□□□ -1.16
CLN6-210ENST00000635747 PRO2289Q9P1D8 64 aa7.79□□□□□ -1.16
CLN6-210ENST00000635747 ATP5EP56381 51 aaPredicted RBP7.78□□□□□ -1.16
CLN6-210ENST00000635747 P0C880 135 aa7.76□□□□□ -1.17
CLN6-210ENST00000635747 MUC12Q9UKN1 5478 aa7.75□□□□□ -1.17
CLN6-210ENST00000635747 COA5Q86WW8 74 aa7.74□□□□□ -1.17
CLN6-210ENST00000635747 M0QZ58 72 aa7.72□□□□□ -1.17
CLN6-210ENST00000635747 TMEM258P61165 79 aa7.72□□□□□ -1.17
CLN6-210ENST00000635747 KRTAP5-9P26371 169 aa7.71□□□□□ -1.18
CLN6-210ENST00000635747 KRTAP3-2Q9BYR7 98 aa7.69□□□□□ -1.18
CLN6-210ENST00000635747 NEBP20929 6669 aa7.67□□□□□ -1.18
CLN6-210ENST00000635747 MT1XP80297 61 aa7.66□□□□□ -1.18
CLN6-210ENST00000635747 KMT2DO14686 5537 aa7.62□□□□□ -1.19
CLN6-210ENST00000635747 PCP4P48539 62 aa7.6□□□□□ -1.19
CLN6-210ENST00000635747 LINC01554Q52M75 96 aa7.59□□□□□ -1.19
CLN6-210ENST00000635747 MDN1Q9NU22 5596 aa7.58□□□□□ -1.2
CLN6-210ENST00000635747 KRTAP12-2P59991 146 aa7.53□□□□□ -1.2
CLN6-210ENST00000635747 KRTAP20-1Q3LI63 56 aa7.5□□□□□ -1.21
CLN6-210ENST00000635747 SPRR2FQ96RM1 72 aa7.48□□□□□ -1.21
CLN6-210ENST00000635747 SEC61GP60059 68 aa7.47□□□□□ -1.21
CLN6-210ENST00000635747 KRTAP8-1Q8IUC2 63 aa7.47□□□□□ -1.21
CLN6-210ENST00000635747 SERP1Q9Y6X1 66 aa7.47□□□□□ -1.21
CLN6-210ENST00000635747 SPRR2EP22531 72 aa7.37□□□□□ -1.23
CLN6-210ENST00000635747 SPRR2BP35325 72 aa7.37□□□□□ -1.23
CLN6-210ENST00000635747 SPRR2AP35326 72 aa7.37□□□□□ -1.23
CLN6-210ENST00000635747 A0A1B0GU69 56 aa7.35□□□□□ -1.23
CLN6-210ENST00000635747 LINC01558Q9Y6Z2 57 aa7.33□□□□□ -1.24
CLN6-210ENST00000635747 KRTAP2-3P0C7H8 128 aa7.32□□□□□ -1.24
CLN6-210ENST00000635747 KRTAP2-4Q9BYR9 128 aa7.32□□□□□ -1.24
CLN6-210ENST00000635747 KRTAP4-8A0A0G2JLE6 195 aa7.31□□□□□ -1.24
CLN6-210ENST00000635747 KRTAP4-8Q9BYQ9 185 aa7.31□□□□□ -1.24
CLN6-210ENST00000635747 KRTAP10-7P60409 375 aaPredicted RBP7.3□□□□□ -1.24
CLN6-210ENST00000635747 KRTAP10-12P60413 245 aa7.3□□□□□ -1.24
CLN6-210ENST00000635747 PRR15LQ9BU68 103 aa7.3□□□□□ -1.24
CLN6-210ENST00000635747 RPS28P62857 69 aaKnown RBP7.28□□□□□ -1.24
CLN6-210ENST00000635747 A0A1B0GU33 70 aa7.27□□□□□ -1.25
CLN6-210ENST00000635747 LCE1AQ5T7P2 110 aa7.26□□□□□ -1.25
CLN6-210ENST00000635747 V9GYY9 64 aa7.24□□□□□ -1.25
CLN6-210ENST00000635747 KRTAP13-4Q3LI77 160 aa7.22□□□□□ -1.25
CLN6-210ENST00000635747 SMIM26A0A096LP01 95 aa7.21□□□□□ -1.26
CLN6-210ENST00000635747 Q1T7F1 81 aa7.19□□□□□ -1.26
CLN6-210ENST00000635747 CAMK2N1Q7Z7J9 78 aa7.18□□□□□ -1.26
CLN6-210ENST00000635747 SPRR2DP22532 72 aa7.13□□□□□ -1.27
CLN6-210ENST00000635747 SPATA8Q6RVD6 105 aa7.12□□□□□ -1.27
CLN6-210ENST00000635747 KRTAP2-2Q9BYT5 123 aa7.1□□□□□ -1.27
CLN6-210ENST00000635747 KRTAP2-1Q9BYU5 128 aa7.1□□□□□ -1.27
CLN6-210ENST00000635747 UQCR11O14957 56 aa7.07□□□□□ -1.28
CLN6-210ENST00000635747 A0A0D9SG42 100 aa7.03□□□□□ -1.28
CLN6-210ENST00000635747 PSPHP1O15172 72 aa7.01□□□□□ -1.29
CLN6-210ENST00000635747 KRTAP12-1P59990 96 aa6.96□□□□□ -1.3
CLN6-210ENST00000635747 SPINT4Q6UDR6 99 aa6.96□□□□□ -1.3
CLN6-210ENST00000635747 A8MU10 97 aa6.94□□□□□ -1.3
CLN6-210ENST00000635747 LCE3BQ5TA77 95 aa6.94□□□□□ -1.3
CLN6-210ENST00000635747 MIR22HGQ0VDD5 57 aa6.92□□□□□ -1.3
CLN6-210ENST00000635747 KRTAP19-7Q3SYF9 63 aa6.84□□□□□ -1.31
CLN6-210ENST00000635747 A6NED7 52 aa6.83□□□□□ -1.32
CLN6-210ENST00000635747 MT1EP04732 61 aa6.79□□□□□ -1.32
CLN6-210ENST00000635747 LCE5AQ5TCM9 118 aa6.78□□□□□ -1.32
CLN6-210ENST00000635747 KRTAP19-3Q7Z4W3 81 aa6.76□□□□□ -1.33
CLN6-210ENST00000635747 K7ERS5 55 aa6.74□□□□□ -1.33
CLN6-210ENST00000635747 CDC42SE1Q9NRR8 79 aa6.68□□□□□ -1.34
CLN6-210ENST00000635747 KRTAP19-5Q3LI72 72 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms