RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 K7ERU9 68 aa6.44□□□□□ -1.38
SOX2-OT-248ENST00000628496 KRTAP9-3Q9BYQ3 159 aa6.44□□□□□ -1.38
SOX2-OT-248ENST00000628496 FSIP2Q5CZC0 6907 aa6.43□□□□□ -1.38
SOX2-OT-248ENST00000628496 LCE3BQ5TA77 95 aa6.41□□□□□ -1.38
SOX2-OT-248ENST00000628496 S4R3F8 94 aa6.41□□□□□ -1.38
SOX2-OT-248ENST00000628496 C5orf47Q569G3 176 aa6.4□□□□□ -1.38
SOX2-OT-248ENST00000628496 MT-ATP8P03928 68 aa6.39□□□□□ -1.39
SOX2-OT-248ENST00000628496 LCA10Q71F78 164 aa6.39□□□□□ -1.39
SOX2-OT-248ENST00000628496 LINC00208Q96KT6 92 aa6.39□□□□□ -1.39
SOX2-OT-248ENST00000628496 MP68P56378 58 aa6.36□□□□□ -1.39
SOX2-OT-248ENST00000628496 IMUPQ9GZP8 106 aa6.36□□□□□ -1.39
SOX2-OT-248ENST00000628496 KLKP1Q107X0 134 aa6.35□□□□□ -1.39
SOX2-OT-248ENST00000628496 USH2AO75445 5202 aa6.35□□□□□ -1.39
SOX2-OT-248ENST00000628496 CSAG1Q6PB30 78 aa6.32□□□□□ -1.4
SOX2-OT-248ENST00000628496 A0A0A0MQY5 61 aa6.31□□□□□ -1.4
SOX2-OT-248ENST00000628496 H3BPC8 53 aa6.29□□□□□ -1.4
SOX2-OT-248ENST00000628496 FAM236AA0A1B0GUQ0 79 aa6.28□□□□□ -1.4
SOX2-OT-248ENST00000628496 FAM236BA0A1B0GV22 79 aa6.28□□□□□ -1.4
SOX2-OT-248ENST00000628496 A8MUN3 132 aa6.26□□□□□ -1.41
SOX2-OT-248ENST00000628496 KRTAP9-9Q9BYP9 154 aa6.24□□□□□ -1.41
SOX2-OT-248ENST00000628496 KRTAP9-4Q9BYQ2 154 aa6.24□□□□□ -1.41
SOX2-OT-248ENST00000628496 SSPOA2VEC9 5147 aa6.23□□□□□ -1.41
SOX2-OT-248ENST00000628496 TRAV7A0A075B6U4 112 aa6.21□□□□□ -1.42
SOX2-OT-248ENST00000628496 SMIM20Q8N5G0 67 aa6.21□□□□□ -1.42
SOX2-OT-248ENST00000628496 NDUFC1O43677 76 aa6.19□□□□□ -1.42
SOX2-OT-248ENST00000628496 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
SOX2-OT-248ENST00000628496 DMAC1Q96GE9 116 aa6.17□□□□□ -1.42
SOX2-OT-248ENST00000628496 SEC61GP60059 68 aa6.14□□□□□ -1.43
SOX2-OT-248ENST00000628496 H0YAA0 97 aa6.12□□□□□ -1.43
SOX2-OT-248ENST00000628496 SPRR2GQ9BYE4 73 aa6.12□□□□□ -1.43
SOX2-OT-248ENST00000628496 KRTAP19-6Q3LI70 58 aa6.11□□□□□ -1.43
SOX2-OT-248ENST00000628496 SNURFQ9Y675 71 aa6.09□□□□□ -1.43
SOX2-OT-248ENST00000628496 FCGBPQ9Y6R7 5405 aaPredicted RBP6.08□□□□□ -1.44
SOX2-OT-248ENST00000628496 SERP2Q8N6R1 65 aa6.07□□□□□ -1.44
SOX2-OT-248ENST00000628496 RPS28P62857 69 aaKnown RBP6.06□□□□□ -1.44
SOX2-OT-248ENST00000628496 MT1BP07438 61 aa6.05□□□□□ -1.44
SOX2-OT-248ENST00000628496 KRTAP19-8Q3LI54 63 aa6.05□□□□□ -1.44
SOX2-OT-248ENST00000628496 ADM2Q7Z4H4 148 aa6.05□□□□□ -1.44
SOX2-OT-248ENST00000628496 C20orf197Q8N268 126 aa6.05□□□□□ -1.44
SOX2-OT-248ENST00000628496 CRIPTQ9P021 101 aa6.04□□□□□ -1.44
SOX2-OT-248ENST00000628496 ACYP2P14621 99 aa6.02□□□□□ -1.45
SOX2-OT-248ENST00000628496 LCE1DQ5T752 114 aa6.02□□□□□ -1.45
SOX2-OT-248ENST00000628496 Q5VV11 94 aa6.02□□□□□ -1.45
SOX2-OT-248ENST00000628496 KRTAP4-8A0A0G2JLE6 195 aa6.01□□□□□ -1.45
SOX2-OT-248ENST00000628496 V9GYY9 64 aa6□□□□□ -1.45
SOX2-OT-248ENST00000628496 ANAPC13Q9BS18 74 aa5.99□□□□□ -1.45
SOX2-OT-248ENST00000628496 LCE5AQ5TCM9 118 aa5.98□□□□□ -1.45
SOX2-OT-248ENST00000628496 SPANXA2-OT1Q8N9U9 137 aa5.97□□□□□ -1.45
SOX2-OT-248ENST00000628496 P0C880 135 aa5.96□□□□□ -1.46
SOX2-OT-248ENST00000628496 PRO0628Q9UI54 55 aa5.95□□□□□ -1.46
SOX2-OT-248ENST00000628496 COX7CP15954 63 aa5.93□□□□□ -1.46
SOX2-OT-248ENST00000628496 CHKB-CPT1BH3BT56 60 aa5.91□□□□□ -1.46
SOX2-OT-248ENST00000628496 SPTSSBQ8NFR3 76 aa5.9□□□□□ -1.46
SOX2-OT-248ENST00000628496 A6NN06 94 aa5.88□□□□□ -1.47
SOX2-OT-248ENST00000628496 CYSTM1Q9H1C7 97 aa5.87□□□□□ -1.47
SOX2-OT-248ENST00000628496 R4GN34 69 aa5.87□□□□□ -1.47
SOX2-OT-248ENST00000628496 KRTAP10-5P60370 271 aa5.86□□□□□ -1.47
SOX2-OT-248ENST00000628496 M0QZ58 72 aa5.84□□□□□ -1.47
SOX2-OT-248ENST00000628496 H7BZZ5 65 aa5.83□□□□□ -1.48
SOX2-OT-248ENST00000628496 COA5Q86WW8 74 aa5.81□□□□□ -1.48
SOX2-OT-248ENST00000628496 MACF1Q9UPN3 7388 aaKnown RBP5.81□□□□□ -1.48
SOX2-OT-248ENST00000628496 KRTAP4-9Q9BYQ8 210 aa5.78□□□□□ -1.48
SOX2-OT-248ENST00000628496 CCDC179H3BU77 68 aa5.77□□□□□ -1.49
SOX2-OT-248ENST00000628496 KRTAP4-7Q9BYR0 210 aa5.76□□□□□ -1.49
SOX2-OT-248ENST00000628496 LINC01554Q52M75 96 aa5.75□□□□□ -1.49
SOX2-OT-248ENST00000628496 PLAC4Q8WY50 150 aa5.74□□□□□ -1.49
SOX2-OT-248ENST00000628496 MT1XP80297 61 aa5.72□□□□□ -1.49
SOX2-OT-248ENST00000628496 TMEM258P61165 79 aa5.7□□□□□ -1.5
SOX2-OT-248ENST00000628496 SYNE2Q8WXH0 6885 aaKnown RBP5.69□□□□□ -1.5
SOX2-OT-248ENST00000628496 KRTAP6-3Q3LI67 103 aa5.67□□□□□ -1.5
SOX2-OT-248ENST00000628496 PRO2289Q9P1D8 64 aa5.67□□□□□ -1.5
SOX2-OT-248ENST00000628496 KRTAP13-4Q3LI77 160 aa5.66□□□□□ -1.5
SOX2-OT-248ENST00000628496 KRTAP4-11Q9BYQ6 195 aa5.66□□□□□ -1.5
SOX2-OT-248ENST00000628496 PMAIP1Q13794 54 aa5.64□□□□□ -1.51
SOX2-OT-248ENST00000628496 SERP1Q9Y6X1 66 aa5.59□□□□□ -1.51
SOX2-OT-248ENST00000628496 SMIM26A0A096LP01 95 aa5.56□□□□□ -1.52
SOX2-OT-248ENST00000628496 ATP5EP56381 51 aaPredicted RBP5.56□□□□□ -1.52
SOX2-OT-248ENST00000628496 KRTAP12-2P59991 146 aa5.52□□□□□ -1.53
SOX2-OT-248ENST00000628496 A0A1B0GU33 70 aa5.51□□□□□ -1.53
SOX2-OT-248ENST00000628496 KRTAP5-9P26371 169 aa5.5□□□□□ -1.53
SOX2-OT-248ENST00000628496 SPATA8Q6RVD6 105 aa5.5□□□□□ -1.53
SOX2-OT-248ENST00000628496 KRTAP4-2Q9BYR5 136 aa5.5□□□□□ -1.53
SOX2-OT-248ENST00000628496 A0A1B0GU69 56 aa5.48□□□□□ -1.53
SOX2-OT-248ENST00000628496 A0A0D9SG42 100 aa5.47□□□□□ -1.53
SOX2-OT-248ENST00000628496 KMT2DO14686 5537 aa5.47□□□□□ -1.53
SOX2-OT-248ENST00000628496 KRTAP10-7P60409 375 aaPredicted RBP5.46□□□□□ -1.54
SOX2-OT-248ENST00000628496 KRTAP10-12P60413 245 aa5.42□□□□□ -1.54
SOX2-OT-248ENST00000628496 CAMK2N1Q7Z7J9 78 aa5.42□□□□□ -1.54
SOX2-OT-248ENST00000628496 MUC12Q9UKN1 5478 aa5.41□□□□□ -1.54
SOX2-OT-248ENST00000628496 KRTAP8-1Q8IUC2 63 aa5.41□□□□□ -1.54
SOX2-OT-248ENST00000628496 BRK1Q8WUW1 75 aa5.41□□□□□ -1.54
SOX2-OT-248ENST00000628496 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
SOX2-OT-248ENST00000628496 SPINT4Q6UDR6 99 aa5.37□□□□□ -1.55
SOX2-OT-248ENST00000628496 SPRR2FQ96RM1 72 aa5.37□□□□□ -1.55
SOX2-OT-248ENST00000628496 LINC01558Q9Y6Z2 57 aa5.37□□□□□ -1.55
SOX2-OT-248ENST00000628496 PRR15LQ9BU68 103 aa5.35□□□□□ -1.55
SOX2-OT-248ENST00000628496 A8MU10 97 aa5.34□□□□□ -1.55
SOX2-OT-248ENST00000628496 KTN1-AS1Q86SY8 53 aa5.34□□□□□ -1.55
SOX2-OT-248ENST00000628496 MDN1Q9NU22 5596 aa5.33□□□□□ -1.56
SOX2-OT-248ENST00000628496 NEBP20929 6669 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms