RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 A8MUN3 132 aa9.85□□□□□ -0.83
CNOT9-209ENST00000627282 KRTAP19-2Q3LHN2 52 aa9.83□□□□□ -0.84
CNOT9-209ENST00000627282 LCE2CQ5TA81 110 aa9.83□□□□□ -0.84
CNOT9-209ENST00000627282 CHKB-CPT1BH3BT56 60 aa9.82□□□□□ -0.84
CNOT9-209ENST00000627282 LINC01558Q9Y6Z2 57 aa9.75□□□□□ -0.85
CNOT9-209ENST00000627282 KRTAP3-1Q9BYR8 98 aa9.74□□□□□ -0.85
CNOT9-209ENST00000627282 PSPHP1O15172 72 aa9.72□□□□□ -0.85
CNOT9-209ENST00000627282 COX6B2Q6YFQ2 88 aa9.72□□□□□ -0.85
CNOT9-209ENST00000627282 KRTAP9-2Q9BYQ4 174 aa9.7□□□□□ -0.86
CNOT9-209ENST00000627282 MT1HP80294 61 aa9.69□□□□□ -0.86
CNOT9-209ENST00000627282 PRR15LQ9BU68 103 aa9.68□□□□□ -0.86
CNOT9-209ENST00000627282 Q5VV11 94 aa9.66□□□□□ -0.86
CNOT9-209ENST00000627282 FLGP20930 4061 aaPredicted RBP9.65□□□□□ -0.86
CNOT9-209ENST00000627282 SPTSSBQ8NFR3 76 aa9.59□□□□□ -0.87
CNOT9-209ENST00000627282 RBM12B-AS1Q9P1G2 102 aa9.57□□□□□ -0.88
CNOT9-209ENST00000627282 M0R2T5 61 aa9.51□□□□□ -0.89
CNOT9-209ENST00000627282 A0A1B0GU69 56 aa9.5□□□□□ -0.89
CNOT9-209ENST00000627282 LORP23490 312 aaPredicted RBP9.49□□□□□ -0.89
CNOT9-209ENST00000627282 KRTAP10-6P60371 365 aaPredicted RBP9.49□□□□□ -0.89
CNOT9-209ENST00000627282 BRK1Q8WUW1 75 aa9.49□□□□□ -0.89
CNOT9-209ENST00000627282 A6NED7 52 aa9.42□□□□□ -0.9
CNOT9-209ENST00000627282 H1FX-AS1Q4G0G2 97 aa9.42□□□□□ -0.9
CNOT9-209ENST00000627282 PRO0628Q9UI54 55 aa9.41□□□□□ -0.9
CNOT9-209ENST00000627282 S4R3F8 94 aa9.38□□□□□ -0.91
CNOT9-209ENST00000627282 SEC61GP60059 68 aa9.38□□□□□ -0.91
CNOT9-209ENST00000627282 LCA10Q71F78 164 aa9.38□□□□□ -0.91
CNOT9-209ENST00000627282 KRTAP9-6A0A140TA67 174 aa9.34□□□□□ -0.91
CNOT9-209ENST00000627282 CDC42SE1Q9NRR8 79 aa9.31□□□□□ -0.92
CNOT9-209ENST00000627282 A8MU10 97 aa9.27□□□□□ -0.92
CNOT9-209ENST00000627282 UQCR11O14957 56 aa9.26□□□□□ -0.93
CNOT9-209ENST00000627282 SPATA8Q6RVD6 105 aa9.21□□□□□ -0.93
CNOT9-209ENST00000627282 KRTAP9-8Q9BYQ0 159 aa9.19□□□□□ -0.94
CNOT9-209ENST00000627282 MIR22HGQ0VDD5 57 aa9.18□□□□□ -0.94
CNOT9-209ENST00000627282 CRCT1Q9UGL9 99 aa9.18□□□□□ -0.94
CNOT9-209ENST00000627282 FSIP2Q5CZC0 6907 aa9.18□□□□□ -0.94
CNOT9-209ENST00000627282 LCE2BO14633 110 aa9.16□□□□□ -0.94
CNOT9-209ENST00000627282 A0A1B0GU33 70 aa9.16□□□□□ -0.94
CNOT9-209ENST00000627282 SVIPQ8NHG7 77 aa9.16□□□□□ -0.94
CNOT9-209ENST00000627282 CSAG1Q6PB30 78 aa9.15□□□□□ -0.94
CNOT9-209ENST00000627282 MT2AP02795 61 aa9.07□□□□□ -0.96
CNOT9-209ENST00000627282 H0YAA0 97 aa9.04□□□□□ -0.96
CNOT9-209ENST00000627282 ADM2Q7Z4H4 148 aa9.01□□□□□ -0.97
CNOT9-209ENST00000627282 MT1FP04733 61 aa9□□□□□ -0.97
CNOT9-209ENST00000627282 P0C880 135 aa8.99□□□□□ -0.97
CNOT9-209ENST00000627282 PMAIP1Q13794 54 aa8.98□□□□□ -0.97
CNOT9-209ENST00000627282 KRTAP10-10P60014 251 aa8.95□□□□□ -0.98
CNOT9-209ENST00000627282 A6NN06 94 aa8.92□□□□□ -0.98
CNOT9-209ENST00000627282 KRTAP13-4Q3LI77 160 aa8.9□□□□□ -0.99
CNOT9-209ENST00000627282 KRTAP9-3Q9BYQ3 159 aa8.9□□□□□ -0.99
CNOT9-209ENST00000627282 USH2AO75445 5202 aa8.85□□□□□ -0.99
CNOT9-209ENST00000627282 M0QZ58 72 aa8.79□□□□□ -1
CNOT9-209ENST00000627282 SSPOA2VEC9 5147 aa8.76□□□□□ -1.01
CNOT9-209ENST00000627282 A0A0D9SG42 100 aa8.72□□□□□ -1.01
CNOT9-209ENST00000627282 K7ERS5 55 aa8.71□□□□□ -1.02
CNOT9-209ENST00000627282 KTN1-AS1Q86SY8 53 aa8.68□□□□□ -1.02
CNOT9-209ENST00000627282 R4GN34 69 aa8.65□□□□□ -1.03
CNOT9-209ENST00000627282 KRTAP19-1Q8IUB9 90 aa8.64□□□□□ -1.03
CNOT9-209ENST00000627282 KRTAP12-1P59990 96 aa8.57□□□□□ -1.04
CNOT9-209ENST00000627282 FCGBPQ9Y6R7 5405 aaPredicted RBP8.56□□□□□ -1.04
CNOT9-209ENST00000627282 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.55□□□□□ -1.04
CNOT9-209ENST00000627282 SPRR2GQ9BYE4 73 aa8.55□□□□□ -1.04
CNOT9-209ENST00000627282 KRTAP12-2P59991 146 aa8.54□□□□□ -1.04
CNOT9-209ENST00000627282 CRIPTQ9P021 101 aa8.54□□□□□ -1.04
CNOT9-209ENST00000627282 KRTAP19-6Q3LI70 58 aa8.51□□□□□ -1.05
CNOT9-209ENST00000627282 SPINT4Q6UDR6 99 aa8.51□□□□□ -1.05
CNOT9-209ENST00000627282 LINC01554Q52M75 96 aa8.49□□□□□ -1.05
CNOT9-209ENST00000627282 KRTAP19-8Q3LI54 63 aa8.43□□□□□ -1.06
CNOT9-209ENST00000627282 KRTAP9-7A8MTY7 169 aa8.4□□□□□ -1.06
CNOT9-209ENST00000627282 ROMO1P60602 79 aa8.4□□□□□ -1.06
CNOT9-209ENST00000627282 PRAC1Q96KF2 57 aa8.4□□□□□ -1.07
CNOT9-209ENST00000627282 MT1BP07438 61 aa8.39□□□□□ -1.07
CNOT9-209ENST00000627282 MACF1Q9UPN3 7388 aaKnown RBP8.21□□□□□ -1.1
CNOT9-209ENST00000627282 KRTAP25-1Q3LHN0 102 aa8.16□□□□□ -1.1
CNOT9-209ENST00000627282 CAMK2N1Q7Z7J9 78 aa8.13□□□□□ -1.11
CNOT9-209ENST00000627282 C10orf95Q9H7T3 257 aa8.11□□□□□ -1.11
CNOT9-209ENST00000627282 SYNE2Q8WXH0 6885 aaKnown RBP8.1□□□□□ -1.11
CNOT9-209ENST00000627282 PLAC4Q8WY50 150 aa8.09□□□□□ -1.11
CNOT9-209ENST00000627282 KRTAP10-5P60370 271 aa8.07□□□□□ -1.12
CNOT9-209ENST00000627282 KRTAP6-3Q3LI67 103 aa8.02□□□□□ -1.13
CNOT9-209ENST00000627282 MT1XP80297 61 aa7.97□□□□□ -1.13
CNOT9-209ENST00000627282 LOC100996750A0A140TA64 210 aa7.95□□□□□ -1.14
CNOT9-209ENST00000627282 KRTAP4-6Q9BYQ5 205 aa7.95□□□□□ -1.14
CNOT9-209ENST00000627282 PRO2289Q9P1D8 64 aa7.9□□□□□ -1.14
CNOT9-209ENST00000627282 TNP1P09430 55 aa7.79□□□□□ -1.16
CNOT9-209ENST00000627282 KRTAP5-9P26371 169 aa7.7□□□□□ -1.18
CNOT9-209ENST00000627282 PP632Q6XCG6 107 aa7.7□□□□□ -1.18
CNOT9-209ENST00000627282 KRTAP23-1A1A580 65 aa7.66□□□□□ -1.18
CNOT9-209ENST00000627282 MUC12Q9UKN1 5478 aa7.63□□□□□ -1.19
CNOT9-209ENST00000627282 KRTAP10-7P60409 375 aaPredicted RBP7.63□□□□□ -1.19
CNOT9-209ENST00000627282 KMT2DO14686 5537 aa7.61□□□□□ -1.19
CNOT9-209ENST00000627282 NEBP20929 6669 aa7.6□□□□□ -1.19
CNOT9-209ENST00000627282 KRTAP10-12P60413 245 aa7.56□□□□□ -1.2
CNOT9-209ENST00000627282 KRTAP4-8A0A0G2JLE6 195 aa7.49□□□□□ -1.21
CNOT9-209ENST00000627282 KRTAP8-1Q8IUC2 63 aa7.49□□□□□ -1.21
CNOT9-209ENST00000627282 KRTAP4-8Q9BYQ9 185 aa7.49□□□□□ -1.21
CNOT9-209ENST00000627282 SPRR2FQ96RM1 72 aa7.49□□□□□ -1.21
CNOT9-209ENST00000627282 MDN1Q9NU22 5596 aa7.48□□□□□ -1.21
CNOT9-209ENST00000627282 LCE3AQ5TA76 89 aa7.42□□□□□ -1.22
CNOT9-209ENST00000627282 KRTAP20-1Q3LI63 56 aa7.38□□□□□ -1.23
CNOT9-209ENST00000627282 SPRR2EP22531 72 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms