RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 MP68P56378 58 aa4.34□□□□□ -1.71
SGMS1-211ENST00000626236 C5orf47Q569G3 176 aa4.34□□□□□ -1.71
SGMS1-211ENST00000626236 RBM12B-AS1Q9P1G2 102 aa4.34□□□□□ -1.71
SGMS1-211ENST00000626236 TRAV7A0A075B6U4 112 aa4.33□□□□□ -1.72
SGMS1-211ENST00000626236 COX6B2Q6YFQ2 88 aa4.33□□□□□ -1.72
SGMS1-211ENST00000626236 LINC00208Q96KT6 92 aa4.33□□□□□ -1.72
SGMS1-211ENST00000626236 FAM236DA0A1B0GTK5 79 aa4.32□□□□□ -1.72
SGMS1-211ENST00000626236 FAM236CP0DP71 79 aa4.32□□□□□ -1.72
SGMS1-211ENST00000626236 KRTAP19-2Q3LHN2 52 aa4.32□□□□□ -1.72
SGMS1-211ENST00000626236 C1orf64Q8NEQ6 169 aa4.32□□□□□ -1.72
SGMS1-211ENST00000626236 MPLKIPQ8TAP9 179 aa4.32□□□□□ -1.72
SGMS1-211ENST00000626236 CYP4F30PQ9H0H9 118 aa4.31□□□□□ -1.72
SGMS1-211ENST00000626236 H3BPC8 53 aa4.29□□□□□ -1.72
SGMS1-211ENST00000626236 C4orf26Q17RF5 130 aa4.29□□□□□ -1.72
SGMS1-211ENST00000626236 SERP2Q8N6R1 65 aa4.29□□□□□ -1.72
SGMS1-211ENST00000626236 KLKP1Q107X0 134 aa4.27□□□□□ -1.73
SGMS1-211ENST00000626236 FLGP20930 4061 aaPredicted RBP4.24□□□□□ -1.73
SGMS1-211ENST00000626236 C20orf197Q8N268 126 aa4.24□□□□□ -1.73
SGMS1-211ENST00000626236 ANAPC13Q9BS18 74 aa4.24□□□□□ -1.73
SGMS1-211ENST00000626236 SNURFQ9Y675 71 aa4.24□□□□□ -1.73
SGMS1-211ENST00000626236 COX7CP15954 63 aa4.23□□□□□ -1.73
SGMS1-211ENST00000626236 MT1HP80294 61 aa4.23□□□□□ -1.73
SGMS1-211ENST00000626236 H1FX-AS1Q4G0G2 97 aa4.22□□□□□ -1.73
SGMS1-211ENST00000626236 M0R2T5 61 aa4.21□□□□□ -1.74
SGMS1-211ENST00000626236 KRTAP9-8Q9BYQ0 159 aa4.19□□□□□ -1.74
SGMS1-211ENST00000626236 A8MUN3 132 aa4.16□□□□□ -1.74
SGMS1-211ENST00000626236 S4R3F8 94 aa4.16□□□□□ -1.74
SGMS1-211ENST00000626236 CCDC179H3BU77 68 aa4.14□□□□□ -1.75
SGMS1-211ENST00000626236 LCA10Q71F78 164 aa4.13□□□□□ -1.75
SGMS1-211ENST00000626236 DMAC1Q96GE9 116 aa4.13□□□□□ -1.75
SGMS1-211ENST00000626236 CYSTM1Q9H1C7 97 aa4.13□□□□□ -1.75
SGMS1-211ENST00000626236 NDUFC1O43677 76 aa4.12□□□□□ -1.75
SGMS1-211ENST00000626236 KRTAP10-6P60371 365 aaPredicted RBP4.11□□□□□ -1.75
SGMS1-211ENST00000626236 SPANXA2-OT1Q8N9U9 137 aa4.11□□□□□ -1.75
SGMS1-211ENST00000626236 H7BZZ5 65 aa4.1□□□□□ -1.75
SGMS1-211ENST00000626236 ACYP2P14621 99 aa4.09□□□□□ -1.75
SGMS1-211ENST00000626236 A0A0A0MQY5 61 aa4.07□□□□□ -1.76
SGMS1-211ENST00000626236 CSAG1Q6PB30 78 aa4.07□□□□□ -1.76
SGMS1-211ENST00000626236 CHKB-CPT1BH3BT56 60 aa4.04□□□□□ -1.76
SGMS1-211ENST00000626236 MT2AP02795 61 aa4.02□□□□□ -1.77
SGMS1-211ENST00000626236 COA5Q86WW8 74 aa4□□□□□ -1.77
SGMS1-211ENST00000626236 MT1FP04733 61 aa3.99□□□□□ -1.77
SGMS1-211ENST00000626236 ATP5EP56381 51 aaPredicted RBP3.99□□□□□ -1.77
SGMS1-211ENST00000626236 KRTAP10-10P60014 251 aa3.99□□□□□ -1.77
SGMS1-211ENST00000626236 TMEM258P61165 79 aa3.99□□□□□ -1.77
SGMS1-211ENST00000626236 SPTSSBQ8NFR3 76 aa3.99□□□□□ -1.77
SGMS1-211ENST00000626236 H0YAA0 97 aa3.94□□□□□ -1.78
SGMS1-211ENST00000626236 ADM2Q7Z4H4 148 aa3.94□□□□□ -1.78
SGMS1-211ENST00000626236 P0C880 135 aa3.87□□□□□ -1.79
SGMS1-211ENST00000626236 FSIP2Q5CZC0 6907 aa3.86□□□□□ -1.79
SGMS1-211ENST00000626236 SERP1Q9Y6X1 66 aa3.86□□□□□ -1.79
SGMS1-211ENST00000626236 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
SGMS1-211ENST00000626236 CRIPTQ9P021 101 aa3.85□□□□□ -1.79
SGMS1-211ENST00000626236 USH2AO75445 5202 aa3.84□□□□□ -1.79
SGMS1-211ENST00000626236 SEC61GP60059 68 aa3.84□□□□□ -1.79
SGMS1-211ENST00000626236 SPRR2GQ9BYE4 73 aa3.82□□□□□ -1.8
SGMS1-211ENST00000626236 R4GN34 69 aa3.82□□□□□ -1.8
SGMS1-211ENST00000626236 M0QZ58 72 aa3.81□□□□□ -1.8
SGMS1-211ENST00000626236 A0A1B0GU69 56 aa3.8□□□□□ -1.8
SGMS1-211ENST00000626236 LINC01558Q9Y6Z2 57 aa3.77□□□□□ -1.81
SGMS1-211ENST00000626236 PRR15LQ9BU68 103 aa3.76□□□□□ -1.81
SGMS1-211ENST00000626236 SSPOA2VEC9 5147 aa3.75□□□□□ -1.81
SGMS1-211ENST00000626236 KRTAP19-8Q3LI54 63 aa3.75□□□□□ -1.81
SGMS1-211ENST00000626236 Q5VV11 94 aa3.75□□□□□ -1.81
SGMS1-211ENST00000626236 A0A1B0GU33 70 aa3.74□□□□□ -1.81
SGMS1-211ENST00000626236 RPS28P62857 69 aaKnown RBP3.74□□□□□ -1.81
SGMS1-211ENST00000626236 LINC01554Q52M75 96 aa3.74□□□□□ -1.81
SGMS1-211ENST00000626236 KRTAP13-4Q3LI77 160 aa3.73□□□□□ -1.81
SGMS1-211ENST00000626236 SMIM26A0A096LP01 95 aa3.72□□□□□ -1.81
SGMS1-211ENST00000626236 MT1BP07438 61 aa3.72□□□□□ -1.81
SGMS1-211ENST00000626236 V9GYY9 64 aa3.72□□□□□ -1.81
SGMS1-211ENST00000626236 Q1T7F1 81 aa3.71□□□□□ -1.82
SGMS1-211ENST00000626236 CRCT1Q9UGL9 99 aa3.71□□□□□ -1.82
SGMS1-211ENST00000626236 SPATA8Q6RVD6 105 aa3.7□□□□□ -1.82
SGMS1-211ENST00000626236 PSPHP1O15172 72 aa3.68□□□□□ -1.82
SGMS1-211ENST00000626236 PLAC4Q8WY50 150 aa3.67□□□□□ -1.82
SGMS1-211ENST00000626236 A0A0D9SG42 100 aa3.66□□□□□ -1.82
SGMS1-211ENST00000626236 KRTAP19-6Q3LI70 58 aa3.64□□□□□ -1.83
SGMS1-211ENST00000626236 A6NN06 94 aa3.63□□□□□ -1.83
SGMS1-211ENST00000626236 UQCR11O14957 56 aa3.63□□□□□ -1.83
SGMS1-211ENST00000626236 FCGBPQ9Y6R7 5405 aaPredicted RBP3.61□□□□□ -1.83
SGMS1-211ENST00000626236 A8MU10 97 aa3.61□□□□□ -1.83
SGMS1-211ENST00000626236 SPINT4Q6UDR6 99 aa3.59□□□□□ -1.83
SGMS1-211ENST00000626236 KRTAP10-5P60370 271 aa3.58□□□□□ -1.84
SGMS1-211ENST00000626236 MIR22HGQ0VDD5 57 aa3.58□□□□□ -1.84
SGMS1-211ENST00000626236 A6NED7 52 aa3.57□□□□□ -1.84
SGMS1-211ENST00000626236 KRTAP12-1P59990 96 aa3.57□□□□□ -1.84
SGMS1-211ENST00000626236 KRTAP12-2P59991 146 aa3.56□□□□□ -1.84
SGMS1-211ENST00000626236 CAMK2N1Q7Z7J9 78 aa3.56□□□□□ -1.84
SGMS1-211ENST00000626236 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
SGMS1-211ENST00000626236 PRO2289Q9P1D8 64 aa3.56□□□□□ -1.84
SGMS1-211ENST00000626236 MT1XP80297 61 aa3.55□□□□□ -1.84
SGMS1-211ENST00000626236 MACF1Q9UPN3 7388 aaKnown RBP3.55□□□□□ -1.84
SGMS1-211ENST00000626236 SYNE2Q8WXH0 6885 aaKnown RBP3.49□□□□□ -1.85
SGMS1-211ENST00000626236 K7ERS5 55 aa3.46□□□□□ -1.86
SGMS1-211ENST00000626236 CDC42SE1Q9NRR8 79 aa3.46□□□□□ -1.86
SGMS1-211ENST00000626236 KRTAP10-7P60409 375 aaPredicted RBP3.41□□□□□ -1.86
SGMS1-211ENST00000626236 KMT2DO14686 5537 aa3.4□□□□□ -1.87
SGMS1-211ENST00000626236 C10orf95Q9H7T3 257 aa3.39□□□□□ -1.87
SGMS1-211ENST00000626236 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms