RNA–Protein interactions for RNA: ENST00000623529.1

LINC01561-202, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

Gene LINC01561, Length 2,160 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-202ENST00000623529 MRPL34Q9BQ48 92 aaKnown RBP5.79□□□□□ -1.48
LINC01561-202ENST00000623529 A0A1B0GVX0 72 aa5.77□□□□□ -1.49
LINC01561-202ENST00000623529 MT1HL1P0DM35 61 aa5.77□□□□□ -1.49
LINC01561-202ENST00000623529 A0A1B0GU69 56 aa5.76□□□□□ -1.49
LINC01561-202ENST00000623529 UQCR11O14957 56 aa5.76□□□□□ -1.49
LINC01561-202ENST00000623529 LINC00304Q8N9R0 145 aa5.75□□□□□ -1.49
LINC01561-202ENST00000623529 LUZP6Q538Z0 58 aa5.74□□□□□ -1.49
LINC01561-202ENST00000623529 KRTAP9-6A0A140TA67 174 aa5.74□□□□□ -1.49
LINC01561-202ENST00000623529 K7ERS5 55 aa5.73□□□□□ -1.49
LINC01561-202ENST00000623529 Q96NJ1 140 aa5.73□□□□□ -1.49
LINC01561-202ENST00000623529 KRTAP9-2Q9BYQ4 174 aa5.73□□□□□ -1.49
LINC01561-202ENST00000623529 RNF213Q63HN8 5207 aa5.73□□□□□ -1.49
LINC01561-202ENST00000623529 SPINK1P00995 79 aa5.73□□□□□ -1.49
LINC01561-202ENST00000623529 DMAC1Q96GE9 116 aa5.72□□□□□ -1.49
LINC01561-202ENST00000623529 P0C880 135 aa5.72□□□□□ -1.49
LINC01561-202ENST00000623529 RPS29P62273 56 aaKnown RBP5.66□□□□□ -1.5
LINC01561-202ENST00000623529 C20orf166-AS1Q96NR2 134 aa5.66□□□□□ -1.5
LINC01561-202ENST00000623529 KRTAP25-1Q3LHN0 102 aa5.63□□□□□ -1.51
LINC01561-202ENST00000623529 KRTAP13-3Q3SY46 172 aa5.63□□□□□ -1.51
LINC01561-202ENST00000623529 NDUFAF8A1L188 74 aa5.56□□□□□ -1.52
LINC01561-202ENST00000623529 IGKV2-30P06310 120 aa5.56□□□□□ -1.52
LINC01561-202ENST00000623529 LRP2P98164 4655 aa5.55□□□□□ -1.52
LINC01561-202ENST00000623529 Q5W150 140 aa5.54□□□□□ -1.52
LINC01561-202ENST00000623529 LPAP08519 4548 aa5.52□□□□□ -1.53
LINC01561-202ENST00000623529 C9orf92A6NGG3 77 aa5.52□□□□□ -1.53
LINC01561-202ENST00000623529 FAT4Q6V0I7 4981 aa5.48□□□□□ -1.53
LINC01561-202ENST00000623529 CAMK2N1Q7Z7J9 78 aa5.48□□□□□ -1.53
LINC01561-202ENST00000623529 IGKV2D-30A0A075B6S6 120 aa5.47□□□□□ -1.53
LINC01561-202ENST00000623529 A8MUU9 505 aa5.46□□□□□ -1.53
LINC01561-202ENST00000623529 XP32Q5T750 250 aa5.42□□□□□ -1.54
LINC01561-202ENST00000623529 TPRXLQ17RH7 258 aa5.41□□□□□ -1.54
LINC01561-202ENST00000623529 MUC2Q02817 5179 aa5.4□□□□□ -1.55
LINC01561-202ENST00000623529 SPINT4Q6UDR6 99 aa5.37□□□□□ -1.55
LINC01561-202ENST00000623529 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
LINC01561-202ENST00000623529 RPL37P61927 97 aaKnown RBP5.34□□□□□ -1.55
LINC01561-202ENST00000623529 A0A1B0GU33 70 aa5.33□□□□□ -1.56
LINC01561-202ENST00000623529 CRCT1Q9UGL9 99 aa5.32□□□□□ -1.56
LINC01561-202ENST00000623529 H0YAA0 97 aa5.31□□□□□ -1.56
LINC01561-202ENST00000623529 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
LINC01561-202ENST00000623529 H1FX-AS1Q4G0G2 97 aa5.29□□□□□ -1.56
LINC01561-202ENST00000623529 KRTAP4-1Q9BYQ7 146 aa5.24□□□□□ -1.57
LINC01561-202ENST00000623529 LCE2DQ5TA82 110 aaPredicted RBP5.22□□□□□ -1.57
LINC01561-202ENST00000623529 COX6B2Q6YFQ2 88 aa5.22□□□□□ -1.57
LINC01561-202ENST00000623529 MUC17Q685J3 4493 aa5.21□□□□□ -1.57
LINC01561-202ENST00000623529 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
LINC01561-202ENST00000623529 FSIP2Q5CZC0 6907 aa5.2□□□□□ -1.58
LINC01561-202ENST00000623529 KRTAP3-1Q9BYR8 98 aa5.11□□□□□ -1.59
LINC01561-202ENST00000623529 KRTAP9-7A8MTY7 169 aa5.09□□□□□ -1.59
LINC01561-202ENST00000623529 CRIPTQ9P021 101 aa5.08□□□□□ -1.6
LINC01561-202ENST00000623529 KRTAP19-2Q3LHN2 52 aa5.06□□□□□ -1.6
LINC01561-202ENST00000623529 LCE2CQ5TA81 110 aa4.99□□□□□ -1.61
LINC01561-202ENST00000623529 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.98□□□□□ -1.61
LINC01561-202ENST00000623529 FLGP20930 4061 aaPredicted RBP4.95□□□□□ -1.62
LINC01561-202ENST00000623529 PRO2289Q9P1D8 64 aa4.95□□□□□ -1.62
LINC01561-202ENST00000623529 KRTAP3-3Q9BYR6 98 aa4.92□□□□□ -1.62
LINC01561-202ENST00000623529 KRTAP10-6P60371 365 aaPredicted RBP4.89□□□□□ -1.63
LINC01561-202ENST00000623529 S4R3F8 94 aa4.89□□□□□ -1.63
LINC01561-202ENST00000623529 MT1HP80294 61 aa4.87□□□□□ -1.63
LINC01561-202ENST00000623529 A0A0D9SG42 100 aa4.86□□□□□ -1.63
LINC01561-202ENST00000623529 R4GN34 69 aa4.84□□□□□ -1.63
LINC01561-202ENST00000623529 C10orf95Q9H7T3 257 aa4.82□□□□□ -1.64
LINC01561-202ENST00000623529 M0QZ58 72 aa4.82□□□□□ -1.64
LINC01561-202ENST00000623529 KRTAP13-4Q3LI77 160 aa4.81□□□□□ -1.64
LINC01561-202ENST00000623529 KRTAP3-2Q9BYR7 98 aa4.81□□□□□ -1.64
LINC01561-202ENST00000623529 PLAC4Q8WY50 150 aa4.77□□□□□ -1.65
LINC01561-202ENST00000623529 M0R2T5 61 aa4.77□□□□□ -1.65
LINC01561-202ENST00000623529 KRTAP12-1P59990 96 aa4.75□□□□□ -1.65
LINC01561-202ENST00000623529 KRTAP12-2P59991 146 aa4.74□□□□□ -1.65
LINC01561-202ENST00000623529 KRTAP9-8Q9BYQ0 159 aa4.7□□□□□ -1.66
LINC01561-202ENST00000623529 LORP23490 312 aaPredicted RBP4.68□□□□□ -1.66
LINC01561-202ENST00000623529 PP632Q6XCG6 107 aa4.68□□□□□ -1.66
LINC01561-202ENST00000623529 SSPOA2VEC9 5147 aa4.66□□□□□ -1.66
LINC01561-202ENST00000623529 MT2AP02795 61 aa4.64□□□□□ -1.67
LINC01561-202ENST00000623529 INE1O15225 51 aa4.64□□□□□ -1.67
LINC01561-202ENST00000623529 MT1FP04733 61 aa4.63□□□□□ -1.67
LINC01561-202ENST00000623529 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
LINC01561-202ENST00000623529 SYNE2Q8WXH0 6885 aaKnown RBP4.58□□□□□ -1.68
LINC01561-202ENST00000623529 KRTAP10-10P60014 251 aa4.58□□□□□ -1.68
LINC01561-202ENST00000623529 USH2AO75445 5202 aa4.58□□□□□ -1.68
LINC01561-202ENST00000623529 MACF1Q9UPN3 7388 aaKnown RBP4.53□□□□□ -1.68
LINC01561-202ENST00000623529 KRTAP9-3Q9BYQ3 159 aa4.53□□□□□ -1.68
LINC01561-202ENST00000623529 KRTAP19-1Q8IUB9 90 aa4.51□□□□□ -1.69
LINC01561-202ENST00000623529 SPRR2GQ9BYE4 73 aa4.47□□□□□ -1.69
LINC01561-202ENST00000623529 KRTAP6-3Q3LI67 103 aa4.47□□□□□ -1.69
LINC01561-202ENST00000623529 LCE2BO14633 110 aa4.44□□□□□ -1.7
LINC01561-202ENST00000623529 KRTAP20-1Q3LI63 56 aa4.42□□□□□ -1.7
LINC01561-202ENST00000623529 NEBP20929 6669 aa4.42□□□□□ -1.7
LINC01561-202ENST00000623529 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
LINC01561-202ENST00000623529 MT1BP07438 61 aa4.36□□□□□ -1.71
LINC01561-202ENST00000623529 SPRR5A0A1B0GTR4 108 aa4.34□□□□□ -1.71
LINC01561-202ENST00000623529 TNP1P09430 55 aa4.29□□□□□ -1.72
LINC01561-202ENST00000623529 KRTAP19-6Q3LI70 58 aa4.27□□□□□ -1.73
LINC01561-202ENST00000623529 MUC12Q9UKN1 5478 aa4.19□□□□□ -1.74
LINC01561-202ENST00000623529 MT1XP80297 61 aa4.19□□□□□ -1.74
LINC01561-202ENST00000623529 KRTAP10-5P60370 271 aa4.18□□□□□ -1.74
LINC01561-202ENST00000623529 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
LINC01561-202ENST00000623529 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
LINC01561-202ENST00000623529 GPR98Q8WXG9 6306 aa4.07□□□□□ -1.76
LINC01561-202ENST00000623529 KMT2DO14686 5537 aa4.07□□□□□ -1.76
LINC01561-202ENST00000623529 MDN1Q9NU22 5596 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms