RNA–Protein interactions for RNA: ENST00000622534.1

GTF3C2-214, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5 BASIC

Gene GTF3C2, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-214ENST00000622534 KRTAP3-1Q9BYR8 98 aa7.24□□□□□ -1.25
GTF3C2-214ENST00000622534 SPANXA2-OT1Q8N9U9 137 aa7.23□□□□□ -1.25
GTF3C2-214ENST00000622534 A8MUN3 132 aa7.22□□□□□ -1.25
GTF3C2-214ENST00000622534 FAT4Q6V0I7 4981 aa7.21□□□□□ -1.25
GTF3C2-214ENST00000622534 H1FX-AS1Q4G0G2 97 aa7.21□□□□□ -1.25
GTF3C2-214ENST00000622534 DMAC1Q96GE9 116 aa7.19□□□□□ -1.26
GTF3C2-214ENST00000622534 FLGP20930 4061 aaPredicted RBP7.17□□□□□ -1.26
GTF3C2-214ENST00000622534 MT1HP80294 61 aa7.12□□□□□ -1.27
GTF3C2-214ENST00000622534 ACYP2P14621 99 aa7.1□□□□□ -1.27
GTF3C2-214ENST00000622534 S4R3F8 94 aa7.08□□□□□ -1.28
GTF3C2-214ENST00000622534 PSPHP1O15172 72 aa7.06□□□□□ -1.28
GTF3C2-214ENST00000622534 LCE2AQ5TA79 106 aaPredicted RBP7.06□□□□□ -1.28
GTF3C2-214ENST00000622534 Q5VV11 94 aa7.05□□□□□ -1.28
GTF3C2-214ENST00000622534 LCA10Q71F78 164 aa7.04□□□□□ -1.28
GTF3C2-214ENST00000622534 KRTAP3-3Q9BYR6 98 aa7.01□□□□□ -1.29
GTF3C2-214ENST00000622534 H3BS24 57 aa7□□□□□ -1.29
GTF3C2-214ENST00000622534 M0R2T5 61 aa6.99□□□□□ -1.29
GTF3C2-214ENST00000622534 CHKB-CPT1BH3BT56 60 aa6.97□□□□□ -1.29
GTF3C2-214ENST00000622534 CSAG1Q6PB30 78 aa6.97□□□□□ -1.29
GTF3C2-214ENST00000622534 KTN1-AS1Q86SY8 53 aa6.96□□□□□ -1.29
GTF3C2-214ENST00000622534 COA5Q86WW8 74 aa6.96□□□□□ -1.3
GTF3C2-214ENST00000622534 PRR15LQ9BU68 103 aa6.93□□□□□ -1.3
GTF3C2-214ENST00000622534 SPTSSBQ8NFR3 76 aa6.92□□□□□ -1.3
GTF3C2-214ENST00000622534 LINC01558Q9Y6Z2 57 aa6.92□□□□□ -1.3
GTF3C2-214ENST00000622534 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
GTF3C2-214ENST00000622534 KRTAP10-6P60371 365 aaPredicted RBP6.91□□□□□ -1.3
GTF3C2-214ENST00000622534 LORP23490 312 aaPredicted RBP6.88□□□□□ -1.31
GTF3C2-214ENST00000622534 A6NN06 94 aa6.87□□□□□ -1.31
GTF3C2-214ENST00000622534 A6NED7 52 aa6.87□□□□□ -1.31
GTF3C2-214ENST00000622534 H0YAA0 97 aa6.83□□□□□ -1.32
GTF3C2-214ENST00000622534 KRTAP9-8Q9BYQ0 159 aa6.83□□□□□ -1.32
GTF3C2-214ENST00000622534 A8MU10 97 aa6.82□□□□□ -1.32
GTF3C2-214ENST00000622534 MT2AP02795 61 aa6.77□□□□□ -1.33
GTF3C2-214ENST00000622534 MT1FP04733 61 aa6.72□□□□□ -1.33
GTF3C2-214ENST00000622534 ADM2Q7Z4H4 148 aa6.72□□□□□ -1.33
GTF3C2-214ENST00000622534 KRTAP3-2Q9BYR7 98 aa6.7□□□□□ -1.34
GTF3C2-214ENST00000622534 KRTAP10-10P60014 251 aa6.69□□□□□ -1.34
GTF3C2-214ENST00000622534 CRIPTQ9P021 101 aa6.64□□□□□ -1.35
GTF3C2-214ENST00000622534 P0C880 135 aa6.63□□□□□ -1.35
GTF3C2-214ENST00000622534 KRTAP9-3Q9BYQ3 159 aa6.6□□□□□ -1.35
GTF3C2-214ENST00000622534 A0A1B0GU69 56 aa6.59□□□□□ -1.35
GTF3C2-214ENST00000622534 SPATA8Q6RVD6 105 aa6.59□□□□□ -1.35
GTF3C2-214ENST00000622534 LCE2DQ5TA82 110 aaPredicted RBP6.55□□□□□ -1.36
GTF3C2-214ENST00000622534 SPRR2GQ9BYE4 73 aa6.53□□□□□ -1.36
GTF3C2-214ENST00000622534 LINC01554Q52M75 96 aa6.53□□□□□ -1.36
GTF3C2-214ENST00000622534 A0A0A0MQY5 61 aa6.51□□□□□ -1.37
GTF3C2-214ENST00000622534 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
GTF3C2-214ENST00000622534 M0QZ58 72 aa6.5□□□□□ -1.37
GTF3C2-214ENST00000622534 UQCR11O14957 56 aa6.5□□□□□ -1.37
GTF3C2-214ENST00000622534 R4GN34 69 aa6.5□□□□□ -1.37
GTF3C2-214ENST00000622534 A0A1B0GU33 70 aa6.48□□□□□ -1.37
GTF3C2-214ENST00000622534 MIR22HGQ0VDD5 57 aa6.47□□□□□ -1.37
GTF3C2-214ENST00000622534 KRTAP9-2Q9BYQ4 174 aa6.46□□□□□ -1.38
GTF3C2-214ENST00000622534 LCE2BO14633 110 aa6.43□□□□□ -1.38
GTF3C2-214ENST00000622534 KRTAP19-8Q3LI54 63 aa6.41□□□□□ -1.38
GTF3C2-214ENST00000622534 KRTAP13-4Q3LI77 160 aa6.41□□□□□ -1.38
GTF3C2-214ENST00000622534 PRAC1Q96KF2 57 aa6.41□□□□□ -1.38
GTF3C2-214ENST00000622534 USH2AO75445 5202 aa6.34□□□□□ -1.39
GTF3C2-214ENST00000622534 MT1BP07438 61 aa6.32□□□□□ -1.4
GTF3C2-214ENST00000622534 KRTAP9-6A0A140TA67 174 aa6.29□□□□□ -1.4
GTF3C2-214ENST00000622534 A0A0D9SG42 100 aa6.24□□□□□ -1.41
GTF3C2-214ENST00000622534 PLAC4Q8WY50 150 aa6.24□□□□□ -1.41
GTF3C2-214ENST00000622534 KRTAP12-1P59990 96 aa6.17□□□□□ -1.42
GTF3C2-214ENST00000622534 SSPOA2VEC9 5147 aa6.17□□□□□ -1.42
GTF3C2-214ENST00000622534 KRTAP25-1Q3LHN0 102 aa6.16□□□□□ -1.42
GTF3C2-214ENST00000622534 KRTAP19-6Q3LI70 58 aa6.15□□□□□ -1.43
GTF3C2-214ENST00000622534 CRCT1Q9UGL9 99 aa6.15□□□□□ -1.43
GTF3C2-214ENST00000622534 FSIP2Q5CZC0 6907 aa6.14□□□□□ -1.43
GTF3C2-214ENST00000622534 KRTAP12-2P59991 146 aa6.13□□□□□ -1.43
GTF3C2-214ENST00000622534 SPINT4Q6UDR6 99 aa6.13□□□□□ -1.43
GTF3C2-214ENST00000622534 K7ERS5 55 aa6.07□□□□□ -1.44
GTF3C2-214ENST00000622534 KRTAP10-5P60370 271 aa6.07□□□□□ -1.44
GTF3C2-214ENST00000622534 ROMO1P60602 79 aa6.06□□□□□ -1.44
GTF3C2-214ENST00000622534 CAMK2N1Q7Z7J9 78 aa6.05□□□□□ -1.44
GTF3C2-214ENST00000622534 MT1XP80297 61 aa6.05□□□□□ -1.44
GTF3C2-214ENST00000622534 PRO2289Q9P1D8 64 aa6.05□□□□□ -1.44
GTF3C2-214ENST00000622534 FCGBPQ9Y6R7 5405 aaPredicted RBP5.95□□□□□ -1.46
GTF3C2-214ENST00000622534 C10orf95Q9H7T3 257 aa5.85□□□□□ -1.47
GTF3C2-214ENST00000622534 KRTAP10-12P60413 245 aa5.77□□□□□ -1.49
GTF3C2-214ENST00000622534 KRTAP10-7P60409 375 aaPredicted RBP5.77□□□□□ -1.49
GTF3C2-214ENST00000622534 TNP1P09430 55 aa5.74□□□□□ -1.49
GTF3C2-214ENST00000622534 MACF1Q9UPN3 7388 aaKnown RBP5.71□□□□□ -1.5
GTF3C2-214ENST00000622534 LUZP6Q538Z0 58 aa5.7□□□□□ -1.5
GTF3C2-214ENST00000622534 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.68□□□□□ -1.5
GTF3C2-214ENST00000622534 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
GTF3C2-214ENST00000622534 KRTAP9-7A8MTY7 169 aa5.65□□□□□ -1.5
GTF3C2-214ENST00000622534 KRTAP4-8A0A0G2JLE6 195 aa5.59□□□□□ -1.51
GTF3C2-214ENST00000622534 KRTAP4-8Q9BYQ9 185 aa5.59□□□□□ -1.51
GTF3C2-214ENST00000622534 NDUFAF8A1L188 74 aa5.58□□□□□ -1.52
GTF3C2-214ENST00000622534 KMT2DO14686 5537 aa5.57□□□□□ -1.52
GTF3C2-214ENST00000622534 SYNE2Q8WXH0 6885 aaKnown RBP5.55□□□□□ -1.52
GTF3C2-214ENST00000622534 KRTAP23-1A1A580 65 aa5.55□□□□□ -1.52
GTF3C2-214ENST00000622534 KRTAP8-1Q8IUC2 63 aa5.54□□□□□ -1.52
GTF3C2-214ENST00000622534 LCE3AQ5TA76 89 aa5.52□□□□□ -1.53
GTF3C2-214ENST00000622534 KRTAP6-3Q3LI67 103 aa5.5□□□□□ -1.53
GTF3C2-214ENST00000622534 KRTAP5-9P26371 169 aa5.47□□□□□ -1.53
GTF3C2-214ENST00000622534 PP632Q6XCG6 107 aa5.45□□□□□ -1.54
GTF3C2-214ENST00000622534 KRTAP19-7Q3SYF9 63 aa5.41□□□□□ -1.54
GTF3C2-214ENST00000622534 KRTAP19-5Q3LI72 72 aa5.39□□□□□ -1.55
GTF3C2-214ENST00000622534 SPRR2FQ96RM1 72 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms