RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 KRTAP9-2Q9BYQ4 174 aa5.16□□□□□ -1.58
POLR2J3-221ENST00000621093 CYSTM1Q9H1C7 97 aa5.16□□□□□ -1.58
POLR2J3-221ENST00000621093 CSAG1Q6PB30 78 aa5.15□□□□□ -1.59
POLR2J3-221ENST00000621093 KRTAP10-10P60014 251 aa5.14□□□□□ -1.59
POLR2J3-221ENST00000621093 CCDC179H3BU77 68 aa5.12□□□□□ -1.59
POLR2J3-221ENST00000621093 LCE2DQ5TA82 110 aaPredicted RBP5.12□□□□□ -1.59
POLR2J3-221ENST00000621093 NDUFC1O43677 76 aa5.11□□□□□ -1.59
POLR2J3-221ENST00000621093 SPANXA2-OT1Q8N9U9 137 aa5.11□□□□□ -1.59
POLR2J3-221ENST00000621093 KRTAP9-6A0A140TA67 174 aa5.1□□□□□ -1.59
POLR2J3-221ENST00000621093 ACYP2P14621 99 aa5.1□□□□□ -1.59
POLR2J3-221ENST00000621093 H7BZZ5 65 aa5.09□□□□□ -1.59
POLR2J3-221ENST00000621093 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
POLR2J3-221ENST00000621093 CHKB-CPT1BH3BT56 60 aa5.01□□□□□ -1.61
POLR2J3-221ENST00000621093 LCE2BO14633 110 aa5.01□□□□□ -1.61
POLR2J3-221ENST00000621093 ADM2Q7Z4H4 148 aa5□□□□□ -1.61
POLR2J3-221ENST00000621093 COA5Q86WW8 74 aa4.99□□□□□ -1.61
POLR2J3-221ENST00000621093 H0YAA0 97 aa4.98□□□□□ -1.61
POLR2J3-221ENST00000621093 PCP4P48539 62 aa4.95□□□□□ -1.62
POLR2J3-221ENST00000621093 KRTAP19-1Q8IUB9 90 aa4.95□□□□□ -1.62
POLR2J3-221ENST00000621093 SPTSSBQ8NFR3 76 aa4.95□□□□□ -1.62
POLR2J3-221ENST00000621093 P0C880 135 aa4.94□□□□□ -1.62
POLR2J3-221ENST00000621093 KRTAP3-2Q9BYR7 98 aa4.94□□□□□ -1.62
POLR2J3-221ENST00000621093 SPRR2GQ9BYE4 73 aa4.9□□□□□ -1.63
POLR2J3-221ENST00000621093 TMEM258P61165 79 aa4.88□□□□□ -1.63
POLR2J3-221ENST00000621093 CRCT1Q9UGL9 99 aa4.88□□□□□ -1.63
POLR2J3-221ENST00000621093 USH2AO75445 5202 aa4.88□□□□□ -1.63
POLR2J3-221ENST00000621093 ATP5EP56381 51 aaPredicted RBP4.87□□□□□ -1.63
POLR2J3-221ENST00000621093 CRIPTQ9P021 101 aa4.87□□□□□ -1.63
POLR2J3-221ENST00000621093 KRTAP19-8Q3LI54 63 aa4.84□□□□□ -1.63
POLR2J3-221ENST00000621093 MT1BP07438 61 aa4.83□□□□□ -1.64
POLR2J3-221ENST00000621093 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
POLR2J3-221ENST00000621093 M0QZ58 72 aa4.81□□□□□ -1.64
POLR2J3-221ENST00000621093 Q5VV11 94 aa4.8□□□□□ -1.64
POLR2J3-221ENST00000621093 R4GN34 69 aa4.8□□□□□ -1.64
POLR2J3-221ENST00000621093 SSPOA2VEC9 5147 aa4.76□□□□□ -1.65
POLR2J3-221ENST00000621093 SEC61GP60059 68 aa4.74□□□□□ -1.65
POLR2J3-221ENST00000621093 KRTAP19-6Q3LI70 58 aa4.74□□□□□ -1.65
POLR2J3-221ENST00000621093 KRTAP13-4Q3LI77 160 aa4.74□□□□□ -1.65
POLR2J3-221ENST00000621093 LINC01554Q52M75 96 aa4.74□□□□□ -1.65
POLR2J3-221ENST00000621093 SERP1Q9Y6X1 66 aa4.74□□□□□ -1.65
POLR2J3-221ENST00000621093 A0A1B0GU69 56 aa4.7□□□□□ -1.66
POLR2J3-221ENST00000621093 LINC01558Q9Y6Z2 57 aa4.68□□□□□ -1.66
POLR2J3-221ENST00000621093 A0A1B0GU33 70 aa4.67□□□□□ -1.66
POLR2J3-221ENST00000621093 SPATA8Q6RVD6 105 aa4.66□□□□□ -1.66
POLR2J3-221ENST00000621093 PLAC4Q8WY50 150 aa4.65□□□□□ -1.67
POLR2J3-221ENST00000621093 A6NN06 94 aa4.63□□□□□ -1.67
POLR2J3-221ENST00000621093 KRTAP10-5P60370 271 aa4.63□□□□□ -1.67
POLR2J3-221ENST00000621093 FCGBPQ9Y6R7 5405 aaPredicted RBP4.61□□□□□ -1.67
POLR2J3-221ENST00000621093 A0A0D9SG42 100 aa4.61□□□□□ -1.67
POLR2J3-221ENST00000621093 PRR15LQ9BU68 103 aa4.61□□□□□ -1.67
POLR2J3-221ENST00000621093 MT1XP80297 61 aa4.59□□□□□ -1.67
POLR2J3-221ENST00000621093 RPS28P62857 69 aaKnown RBP4.57□□□□□ -1.68
POLR2J3-221ENST00000621093 SMIM26A0A096LP01 95 aa4.56□□□□□ -1.68
POLR2J3-221ENST00000621093 A8MU10 97 aa4.56□□□□□ -1.68
POLR2J3-221ENST00000621093 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.55□□□□□ -1.68
POLR2J3-221ENST00000621093 Q1T7F1 81 aa4.55□□□□□ -1.68
POLR2J3-221ENST00000621093 KRTAP9-7A8MTY7 169 aa4.54□□□□□ -1.68
POLR2J3-221ENST00000621093 PSPHP1O15172 72 aa4.53□□□□□ -1.68
POLR2J3-221ENST00000621093 V9GYY9 64 aa4.52□□□□□ -1.69
POLR2J3-221ENST00000621093 KRTAP12-1P59990 96 aa4.51□□□□□ -1.69
POLR2J3-221ENST00000621093 SPINT4Q6UDR6 99 aa4.51□□□□□ -1.69
POLR2J3-221ENST00000621093 PRO2289Q9P1D8 64 aa4.51□□□□□ -1.69
POLR2J3-221ENST00000621093 KRTAP12-2P59991 146 aa4.5□□□□□ -1.69
POLR2J3-221ENST00000621093 UQCR11O14957 56 aa4.48□□□□□ -1.69
POLR2J3-221ENST00000621093 CAMK2N1Q7Z7J9 78 aa4.46□□□□□ -1.7
POLR2J3-221ENST00000621093 MIR22HGQ0VDD5 57 aa4.43□□□□□ -1.7
POLR2J3-221ENST00000621093 KRTAP10-7P60409 375 aaPredicted RBP4.4□□□□□ -1.71
POLR2J3-221ENST00000621093 MACF1Q9UPN3 7388 aaKnown RBP4.37□□□□□ -1.71
POLR2J3-221ENST00000621093 A6NED7 52 aa4.36□□□□□ -1.71
POLR2J3-221ENST00000621093 KRTAP10-12P60413 245 aa4.34□□□□□ -1.71
POLR2J3-221ENST00000621093 KRTAP4-8A0A0G2JLE6 195 aa4.33□□□□□ -1.72
POLR2J3-221ENST00000621093 KRTAP4-8Q9BYQ9 185 aa4.33□□□□□ -1.72
POLR2J3-221ENST00000621093 KRTAP6-3Q3LI67 103 aa4.32□□□□□ -1.72
POLR2J3-221ENST00000621093 C10orf95Q9H7T3 257 aa4.31□□□□□ -1.72
POLR2J3-221ENST00000621093 SYNE2Q8WXH0 6885 aaKnown RBP4.3□□□□□ -1.72
POLR2J3-221ENST00000621093 KRTAP8-1Q8IUC2 63 aa4.26□□□□□ -1.73
POLR2J3-221ENST00000621093 KMT2DO14686 5537 aa4.26□□□□□ -1.73
POLR2J3-221ENST00000621093 K7ERS5 55 aa4.24□□□□□ -1.73
POLR2J3-221ENST00000621093 KRTAP5-9P26371 169 aa4.23□□□□□ -1.73
POLR2J3-221ENST00000621093 CDC42SE1Q9NRR8 79 aa4.23□□□□□ -1.73
POLR2J3-221ENST00000621093 SPRR2FQ96RM1 72 aa4.2□□□□□ -1.74
POLR2J3-221ENST00000621093 TNP1P09430 55 aa4.18□□□□□ -1.74
POLR2J3-221ENST00000621093 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
POLR2J3-221ENST00000621093 KRTAP19-7Q3SYF9 63 aa4.1□□□□□ -1.75
POLR2J3-221ENST00000621093 KRTAP19-5Q3LI72 72 aa4.08□□□□□ -1.76
POLR2J3-221ENST00000621093 BRK1Q8WUW1 75 aa4.08□□□□□ -1.76
POLR2J3-221ENST00000621093 SPRR2EP22531 72 aa4.07□□□□□ -1.76
POLR2J3-221ENST00000621093 SPRR2BP35325 72 aa4.07□□□□□ -1.76
POLR2J3-221ENST00000621093 SPRR2AP35326 72 aa4.07□□□□□ -1.76
POLR2J3-221ENST00000621093 KRTAP25-1Q3LHN0 102 aa4.07□□□□□ -1.76
POLR2J3-221ENST00000621093 LCE1AQ5T7P2 110 aa4.06□□□□□ -1.76
POLR2J3-221ENST00000621093 ROMO1P60602 79 aa4.05□□□□□ -1.76
POLR2J3-221ENST00000621093 MUC12Q9UKN1 5478 aa4.04□□□□□ -1.76
POLR2J3-221ENST00000621093 MT1EP04732 61 aa4.04□□□□□ -1.76
POLR2J3-221ENST00000621093 PRO0628Q9UI54 55 aa4.02□□□□□ -1.77
POLR2J3-221ENST00000621093 NEBP20929 6669 aa4.01□□□□□ -1.77
POLR2J3-221ENST00000621093 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
POLR2J3-221ENST00000621093 KRTAP12-3P60328 96 aa3.94□□□□□ -1.78
POLR2J3-221ENST00000621093 KRTAP19-3Q7Z4W3 81 aa3.94□□□□□ -1.78
POLR2J3-221ENST00000621093 SPRR2DP22532 72 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms