RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 SEC61BP60468 96 aaKnown RBP6.56□□□□□ -1.36
TNFAIP3-209ENST00000619035 COX6B2Q6YFQ2 88 aa6.54□□□□□ -1.36
TNFAIP3-209ENST00000619035 HERC1Q15751 4861 aa6.53□□□□□ -1.36
TNFAIP3-209ENST00000619035 LCA10Q71F78 164 aa6.52□□□□□ -1.37
TNFAIP3-209ENST00000619035 A0A1B0GU69 56 aa6.51□□□□□ -1.37
TNFAIP3-209ENST00000619035 HMCN2Q8NDA2 5059 aa6.44□□□□□ -1.38
TNFAIP3-209ENST00000619035 SPTSSBQ8NFR3 76 aa6.43□□□□□ -1.38
TNFAIP3-209ENST00000619035 CDC42SE1Q9NRR8 79 aa6.43□□□□□ -1.38
TNFAIP3-209ENST00000619035 RBM12B-AS1Q9P1G2 102 aa6.42□□□□□ -1.38
TNFAIP3-209ENST00000619035 KRTAP4-1Q9BYQ7 146 aa6.39□□□□□ -1.39
TNFAIP3-209ENST00000619035 MUC17Q685J3 4493 aa6.39□□□□□ -1.39
TNFAIP3-209ENST00000619035 S4R3F8 94 aa6.37□□□□□ -1.39
TNFAIP3-209ENST00000619035 H1FX-AS1Q4G0G2 97 aa6.36□□□□□ -1.39
TNFAIP3-209ENST00000619035 KRTAP3-3Q9BYR6 98 aa6.34□□□□□ -1.39
TNFAIP3-209ENST00000619035 MUC2Q02817 5179 aa6.34□□□□□ -1.4
TNFAIP3-209ENST00000619035 UQCR11O14957 56 aa6.33□□□□□ -1.4
TNFAIP3-209ENST00000619035 PMAIP1Q13794 54 aa6.33□□□□□ -1.4
TNFAIP3-209ENST00000619035 MIR22HGQ0VDD5 57 aa6.32□□□□□ -1.4
TNFAIP3-209ENST00000619035 SPATA8Q6RVD6 105 aa6.3□□□□□ -1.4
TNFAIP3-209ENST00000619035 UBR4Q5T4S7 5183 aa6.25□□□□□ -1.41
TNFAIP3-209ENST00000619035 A0A1B0GU33 70 aa6.24□□□□□ -1.41
TNFAIP3-209ENST00000619035 A6NN06 94 aa6.24□□□□□ -1.41
TNFAIP3-209ENST00000619035 H0YAA0 97 aa6.24□□□□□ -1.41
TNFAIP3-209ENST00000619035 H3BS24 57 aa6.22□□□□□ -1.41
TNFAIP3-209ENST00000619035 KRTAP19-2Q3LHN2 52 aa6.2□□□□□ -1.42
TNFAIP3-209ENST00000619035 CSAG1Q6PB30 78 aa6.19□□□□□ -1.42
TNFAIP3-209ENST00000619035 KRTAP10-6P60371 365 aaPredicted RBP6.19□□□□□ -1.42
TNFAIP3-209ENST00000619035 KRTAP3-2Q9BYR7 98 aa6.18□□□□□ -1.42
TNFAIP3-209ENST00000619035 RNF213Q63HN8 5207 aa6.17□□□□□ -1.42
TNFAIP3-209ENST00000619035 P0C880 135 aa6.14□□□□□ -1.43
TNFAIP3-209ENST00000619035 KRTAP13-4Q3LI77 160 aa6.12□□□□□ -1.43
TNFAIP3-209ENST00000619035 ADM2Q7Z4H4 148 aa6.11□□□□□ -1.43
TNFAIP3-209ENST00000619035 KTN1-AS1Q86SY8 53 aa6.1□□□□□ -1.43
TNFAIP3-209ENST00000619035 LCE2DQ5TA82 110 aaPredicted RBP6.09□□□□□ -1.43
TNFAIP3-209ENST00000619035 A0A0D9SG42 100 aa6.05□□□□□ -1.44
TNFAIP3-209ENST00000619035 FLGP20930 4061 aaPredicted RBP6.04□□□□□ -1.44
TNFAIP3-209ENST00000619035 FAT4Q6V0I7 4981 aa6.04□□□□□ -1.44
TNFAIP3-209ENST00000619035 LCE2CQ5TA81 110 aa6.03□□□□□ -1.44
TNFAIP3-209ENST00000619035 PRAC1Q96KF2 57 aa6.01□□□□□ -1.45
TNFAIP3-209ENST00000619035 M0R2T5 61 aa5.95□□□□□ -1.46
TNFAIP3-209ENST00000619035 MT1HP80294 61 aa5.92□□□□□ -1.46
TNFAIP3-209ENST00000619035 K7ERS5 55 aa5.9□□□□□ -1.46
TNFAIP3-209ENST00000619035 LORP23490 312 aaPredicted RBP5.9□□□□□ -1.46
TNFAIP3-209ENST00000619035 M0QZ58 72 aa5.9□□□□□ -1.47
TNFAIP3-209ENST00000619035 R4GN34 69 aa5.89□□□□□ -1.47
TNFAIP3-209ENST00000619035 KRTAP12-2P59991 146 aa5.88□□□□□ -1.47
TNFAIP3-209ENST00000619035 A0A0A0MQY5 61 aa5.87□□□□□ -1.47
TNFAIP3-209ENST00000619035 LINC01554Q52M75 96 aa5.85□□□□□ -1.47
TNFAIP3-209ENST00000619035 SPINT4Q6UDR6 99 aa5.85□□□□□ -1.47
TNFAIP3-209ENST00000619035 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
TNFAIP3-209ENST00000619035 CRIPTQ9P021 101 aa5.82□□□□□ -1.48
TNFAIP3-209ENST00000619035 ROMO1P60602 79 aa5.76□□□□□ -1.49
TNFAIP3-209ENST00000619035 MT2AP02795 61 aa5.71□□□□□ -1.5
TNFAIP3-209ENST00000619035 KRTAP9-8Q9BYQ0 159 aa5.71□□□□□ -1.5
TNFAIP3-209ENST00000619035 KRTAP10-10P60014 251 aa5.7□□□□□ -1.5
TNFAIP3-209ENST00000619035 MT1FP04733 61 aa5.69□□□□□ -1.5
TNFAIP3-209ENST00000619035 KRTAP25-1Q3LHN0 102 aa5.68□□□□□ -1.5
TNFAIP3-209ENST00000619035 LCE2AQ5TA79 106 aaPredicted RBP5.67□□□□□ -1.5
TNFAIP3-209ENST00000619035 SPRR2GQ9BYE4 73 aa5.64□□□□□ -1.51
TNFAIP3-209ENST00000619035 C10orf95Q9H7T3 257 aa5.63□□□□□ -1.51
TNFAIP3-209ENST00000619035 KRTAP19-1Q8IUB9 90 aa5.6□□□□□ -1.51
TNFAIP3-209ENST00000619035 CAMK2N1Q7Z7J9 78 aa5.54□□□□□ -1.52
TNFAIP3-209ENST00000619035 KRTAP9-3Q9BYQ3 159 aa5.5□□□□□ -1.53
TNFAIP3-209ENST00000619035 KRTAP19-8Q3LI54 63 aa5.48□□□□□ -1.53
TNFAIP3-209ENST00000619035 PLAC4Q8WY50 150 aa5.48□□□□□ -1.53
TNFAIP3-209ENST00000619035 MT1BP07438 61 aa5.38□□□□□ -1.55
TNFAIP3-209ENST00000619035 LCE2BO14633 110 aa5.34□□□□□ -1.55
TNFAIP3-209ENST00000619035 USH2AO75445 5202 aa5.29□□□□□ -1.56
TNFAIP3-209ENST00000619035 TNP1P09430 55 aa5.25□□□□□ -1.57
TNFAIP3-209ENST00000619035 MT1XP80297 61 aa5.23□□□□□ -1.57
TNFAIP3-209ENST00000619035 KRTAP10-5P60370 271 aa5.23□□□□□ -1.57
TNFAIP3-209ENST00000619035 PRO2289Q9P1D8 64 aa5.21□□□□□ -1.58
TNFAIP3-209ENST00000619035 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
TNFAIP3-209ENST00000619035 PP632Q6XCG6 107 aa5.13□□□□□ -1.59
TNFAIP3-209ENST00000619035 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
TNFAIP3-209ENST00000619035 FSIP2Q5CZC0 6907 aa5.09□□□□□ -1.6
TNFAIP3-209ENST00000619035 KRTAP10-7P60409 375 aaPredicted RBP5.06□□□□□ -1.6
TNFAIP3-209ENST00000619035 LCE3AQ5TA76 89 aa5.06□□□□□ -1.6
TNFAIP3-209ENST00000619035 SSPOA2VEC9 5147 aa5.05□□□□□ -1.6
TNFAIP3-209ENST00000619035 KRTAP19-6Q3LI70 58 aa5.03□□□□□ -1.6
TNFAIP3-209ENST00000619035 KRTAP10-12P60413 245 aa5.02□□□□□ -1.61
TNFAIP3-209ENST00000619035 KMT2DO14686 5537 aa4.93□□□□□ -1.62
TNFAIP3-209ENST00000619035 LUZP6Q538Z0 58 aa4.93□□□□□ -1.62
TNFAIP3-209ENST00000619035 NDUFAF8A1L188 74 aa4.89□□□□□ -1.63
TNFAIP3-209ENST00000619035 KRTAP8-1Q8IUC2 63 aa4.89□□□□□ -1.63
TNFAIP3-209ENST00000619035 KRTAP9-2Q9BYQ4 174 aa4.89□□□□□ -1.63
TNFAIP3-209ENST00000619035 KRTAP4-8A0A0G2JLE6 195 aa4.85□□□□□ -1.63
TNFAIP3-209ENST00000619035 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
TNFAIP3-209ENST00000619035 FCGBPQ9Y6R7 5405 aaPredicted RBP4.83□□□□□ -1.64
TNFAIP3-209ENST00000619035 KRTAP12-3P60328 96 aa4.81□□□□□ -1.64
TNFAIP3-209ENST00000619035 KRTAP19-5Q3LI72 72 aa4.77□□□□□ -1.65
TNFAIP3-209ENST00000619035 CRCT1Q9UGL9 99 aa4.74□□□□□ -1.65
TNFAIP3-209ENST00000619035 SPRR5A0A1B0GTR4 108 aa4.71□□□□□ -1.65
TNFAIP3-209ENST00000619035 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
TNFAIP3-209ENST00000619035 MACF1Q9UPN3 7388 aaKnown RBP4.61□□□□□ -1.67
TNFAIP3-209ENST00000619035 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
TNFAIP3-209ENST00000619035 MT1EP04732 61 aa4.57□□□□□ -1.68
TNFAIP3-209ENST00000619035 SYNE2Q8WXH0 6885 aaKnown RBP4.5□□□□□ -1.69
TNFAIP3-209ENST00000619035 MUC12Q9UKN1 5478 aa4.5□□□□□ -1.69
TNFAIP3-209ENST00000619035 MT1LQ93083 61 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms