RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 SMIM20Q8N5G0 67 aa7.37□□□□□ -1.23
RPP40-207ENST00000618533 KRTAP9-3Q9BYQ3 159 aa7.36□□□□□ -1.23
RPP40-207ENST00000618533 FAM236AA0A1B0GUQ0 79 aa7.33□□□□□ -1.24
RPP40-207ENST00000618533 FAM236BA0A1B0GV22 79 aa7.33□□□□□ -1.24
RPP40-207ENST00000618533 KLKP1Q107X0 134 aa7.33□□□□□ -1.24
RPP40-207ENST00000618533 TRAV7A0A075B6U4 112 aa7.3□□□□□ -1.24
RPP40-207ENST00000618533 NDUFC1O43677 76 aa7.24□□□□□ -1.25
RPP40-207ENST00000618533 DMAC1Q96GE9 116 aa7.2□□□□□ -1.26
RPP40-207ENST00000618533 USH2AO75445 5202 aa7.17□□□□□ -1.26
RPP40-207ENST00000618533 H0YAA0 97 aa7.15□□□□□ -1.26
RPP40-207ENST00000618533 SERP2Q8N6R1 65 aa7.14□□□□□ -1.27
RPP40-207ENST00000618533 CRIPTQ9P021 101 aa7.1□□□□□ -1.27
RPP40-207ENST00000618533 ACYP2P14621 99 aa7.08□□□□□ -1.28
RPP40-207ENST00000618533 KRTAP19-1Q8IUB9 90 aa7.08□□□□□ -1.28
RPP40-207ENST00000618533 SPRR2GQ9BYE4 73 aa7.07□□□□□ -1.28
RPP40-207ENST00000618533 SNURFQ9Y675 71 aa7.07□□□□□ -1.28
RPP40-207ENST00000618533 SSPOA2VEC9 5147 aa7.06□□□□□ -1.28
RPP40-207ENST00000618533 C20orf197Q8N268 126 aa7.05□□□□□ -1.28
RPP40-207ENST00000618533 SPANXA2-OT1Q8N9U9 137 aa7.04□□□□□ -1.28
RPP40-207ENST00000618533 KRTAP19-6Q3LI70 58 aa7.02□□□□□ -1.29
RPP40-207ENST00000618533 KRTAP9-1A8MXZ3 250 aaPredicted RBP7□□□□□ -1.29
RPP40-207ENST00000618533 ADM2Q7Z4H4 148 aa7□□□□□ -1.29
RPP40-207ENST00000618533 KRTAP9-7A8MTY7 169 aa6.99□□□□□ -1.29
RPP40-207ENST00000618533 SPTSSBQ8NFR3 76 aa6.99□□□□□ -1.29
RPP40-207ENST00000618533 COX7CP15954 63 aa6.98□□□□□ -1.29
RPP40-207ENST00000618533 KRTAP19-8Q3LI54 63 aa6.98□□□□□ -1.29
RPP40-207ENST00000618533 Q5VV11 94 aa6.97□□□□□ -1.29
RPP40-207ENST00000618533 CHKB-CPT1BH3BT56 60 aa6.94□□□□□ -1.3
RPP40-207ENST00000618533 MT1BP07438 61 aa6.91□□□□□ -1.3
RPP40-207ENST00000618533 FCGBPQ9Y6R7 5405 aaPredicted RBP6.89□□□□□ -1.31
RPP40-207ENST00000618533 P0C880 135 aa6.85□□□□□ -1.31
RPP40-207ENST00000618533 ANAPC13Q9BS18 74 aa6.84□□□□□ -1.31
RPP40-207ENST00000618533 R4GN34 69 aa6.84□□□□□ -1.31
RPP40-207ENST00000618533 H7BZZ5 65 aa6.81□□□□□ -1.32
RPP40-207ENST00000618533 M0QZ58 72 aa6.78□□□□□ -1.32
RPP40-207ENST00000618533 KRTAP4-8Q9BYQ9 185 aa6.78□□□□□ -1.32
RPP40-207ENST00000618533 A6NN06 94 aa6.77□□□□□ -1.33
RPP40-207ENST00000618533 COA5Q86WW8 74 aa6.77□□□□□ -1.33
RPP40-207ENST00000618533 CYSTM1Q9H1C7 97 aa6.75□□□□□ -1.33
RPP40-207ENST00000618533 KRTAP10-5P60370 271 aa6.74□□□□□ -1.33
RPP40-207ENST00000618533 MACF1Q9UPN3 7388 aaKnown RBP6.71□□□□□ -1.34
RPP40-207ENST00000618533 PLAC4Q8WY50 150 aa6.7□□□□□ -1.34
RPP40-207ENST00000618533 CCDC179H3BU77 68 aa6.65□□□□□ -1.34
RPP40-207ENST00000618533 LINC01554Q52M75 96 aa6.63□□□□□ -1.35
RPP40-207ENST00000618533 PRO2289Q9P1D8 64 aa6.63□□□□□ -1.35
RPP40-207ENST00000618533 ATP5EP56381 51 aaPredicted RBP6.62□□□□□ -1.35
RPP40-207ENST00000618533 SEC61GP60059 68 aa6.62□□□□□ -1.35
RPP40-207ENST00000618533 SERP1Q9Y6X1 66 aa6.6□□□□□ -1.35
RPP40-207ENST00000618533 SYNE2Q8WXH0 6885 aaKnown RBP6.56□□□□□ -1.36
RPP40-207ENST00000618533 MT1XP80297 61 aa6.54□□□□□ -1.36
RPP40-207ENST00000618533 KRTAP6-3Q3LI67 103 aa6.52□□□□□ -1.37
RPP40-207ENST00000618533 TMEM258P61165 79 aa6.5□□□□□ -1.37
RPP40-207ENST00000618533 KRTAP4-12Q9BQ66 201 aa6.49□□□□□ -1.37
RPP40-207ENST00000618533 LCE3BQ5TA77 95 aa6.48□□□□□ -1.37
RPP40-207ENST00000618533 KRTAP13-4Q3LI77 160 aa6.47□□□□□ -1.37
RPP40-207ENST00000618533 A0A1B0GU69 56 aa6.45□□□□□ -1.38
RPP40-207ENST00000618533 A0A1B0GU33 70 aa6.44□□□□□ -1.38
RPP40-207ENST00000618533 KRTAP12-2P59991 146 aa6.4□□□□□ -1.38
RPP40-207ENST00000618533 PRR15LQ9BU68 103 aa6.37□□□□□ -1.39
RPP40-207ENST00000618533 SPATA8Q6RVD6 105 aa6.35□□□□□ -1.39
RPP40-207ENST00000618533 KRTAP9-9Q9BYP9 154 aa6.34□□□□□ -1.39
RPP40-207ENST00000618533 KRTAP9-4Q9BYQ2 154 aa6.34□□□□□ -1.39
RPP40-207ENST00000618533 KRTAP5-9P26371 169 aa6.32□□□□□ -1.4
RPP40-207ENST00000618533 CAMK2N1Q7Z7J9 78 aa6.32□□□□□ -1.4
RPP40-207ENST00000618533 A0A0D9SG42 100 aa6.31□□□□□ -1.4
RPP40-207ENST00000618533 LINC01558Q9Y6Z2 57 aa6.31□□□□□ -1.4
RPP40-207ENST00000618533 SMIM26A0A096LP01 95 aa6.3□□□□□ -1.4
RPP40-207ENST00000618533 KRTAP10-12P60413 245 aa6.25□□□□□ -1.41
RPP40-207ENST00000618533 KRTAP4-8A0A0G2JLE6 195 aa6.23□□□□□ -1.41
RPP40-207ENST00000618533 SPINT4Q6UDR6 99 aa6.23□□□□□ -1.41
RPP40-207ENST00000618533 KRTAP12-1P59990 96 aa6.22□□□□□ -1.41
RPP40-207ENST00000618533 KRTAP10-7P60409 375 aaPredicted RBP6.22□□□□□ -1.41
RPP40-207ENST00000618533 KRTAP8-1Q8IUC2 63 aa6.22□□□□□ -1.41
RPP40-207ENST00000618533 NEBP20929 6669 aa6.18□□□□□ -1.42
RPP40-207ENST00000618533 SVIPQ8NHG7 77 aa6.18□□□□□ -1.42
RPP40-207ENST00000618533 KRTAP20-1Q3LI63 56 aa6.16□□□□□ -1.42
RPP40-207ENST00000618533 KMT2DO14686 5537 aa6.15□□□□□ -1.42
RPP40-207ENST00000618533 A8MU10 97 aa6.15□□□□□ -1.42
RPP40-207ENST00000618533 SPRR2FQ96RM1 72 aa6.15□□□□□ -1.42
RPP40-207ENST00000618533 V9GYY9 64 aa6.15□□□□□ -1.42
RPP40-207ENST00000618533 UQCR11O14957 56 aa6.14□□□□□ -1.43
RPP40-207ENST00000618533 MUC12Q9UKN1 5478 aa6.12□□□□□ -1.43
RPP40-207ENST00000618533 PCP4P48539 62 aa6.07□□□□□ -1.44
RPP40-207ENST00000618533 Q1T7F1 81 aa6.07□□□□□ -1.44
RPP40-207ENST00000618533 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
RPP40-207ENST00000618533 SPRR2EP22531 72 aa6.01□□□□□ -1.45
RPP40-207ENST00000618533 SPRR2BP35325 72 aa6.01□□□□□ -1.45
RPP40-207ENST00000618533 SPRR2AP35326 72 aa6.01□□□□□ -1.45
RPP40-207ENST00000618533 KRTAP4-7Q9BYR0 210 aa6.01□□□□□ -1.45
RPP40-207ENST00000618533 MIR22HGQ0VDD5 57 aa5.99□□□□□ -1.45
RPP40-207ENST00000618533 RPS28P62857 69 aaKnown RBP5.98□□□□□ -1.45
RPP40-207ENST00000618533 MDN1Q9NU22 5596 aa5.97□□□□□ -1.45
RPP40-207ENST00000618533 PSPHP1O15172 72 aa5.97□□□□□ -1.45
RPP40-207ENST00000618533 LCE1AQ5T7P2 110 aa5.96□□□□□ -1.46
RPP40-207ENST00000618533 KRTAP2-3P0C7H8 128 aa5.95□□□□□ -1.46
RPP40-207ENST00000618533 KRTAP2-4Q9BYR9 128 aa5.95□□□□□ -1.46
RPP40-207ENST00000618533 TNP1P09430 55 aa5.92□□□□□ -1.46
RPP40-207ENST00000618533 C10orf95Q9H7T3 257 aa5.91□□□□□ -1.46
RPP40-207ENST00000618533 K7ERS5 55 aa5.89□□□□□ -1.47
RPP40-207ENST00000618533 KRTAP4-9Q9BYQ8 210 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms