RNA–Protein interactions for RNA: ENST00000618312.4

MTHFD1L-212, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like, humanhuman

TSL 5 BASIC

Gene MTHFD1L, Length 3,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1L-212ENST00000618312 KRTAP3-1Q9BYR8 98 aa4.72□□□□□ -1.65
MTHFD1L-212ENST00000618312 KRTAP10-1P60331 282 aa4.71□□□□□ -1.65
MTHFD1L-212ENST00000618312 PKD1P98161 4303 aa4.71□□□□□ -1.66
MTHFD1L-212ENST00000618312 KRTAP13-4Q3LI77 160 aa4.69□□□□□ -1.66
MTHFD1L-212ENST00000618312 DNAH5Q8TE73 4624 aa4.69□□□□□ -1.66
MTHFD1L-212ENST00000618312 HERC2O95714 4834 aa4.68□□□□□ -1.66
MTHFD1L-212ENST00000618312 VPS13BQ7Z7G8 4022 aa4.66□□□□□ -1.66
MTHFD1L-212ENST00000618312 SEC61BP60468 96 aaKnown RBP4.65□□□□□ -1.66
MTHFD1L-212ENST00000618312 KRTAP1-4P0C5Y4 121 aa4.65□□□□□ -1.67
MTHFD1L-212ENST00000618312 EPPK1P58107 5090 aaKnown RBP4.64□□□□□ -1.67
MTHFD1L-212ENST00000618312 KRTAP3-3Q9BYR6 98 aa4.64□□□□□ -1.67
MTHFD1L-212ENST00000618312 KRTAP3-2Q9BYR7 98 aa4.64□□□□□ -1.67
MTHFD1L-212ENST00000618312 SMR3BP02814 79 aaPredicted RBP4.63□□□□□ -1.67
MTHFD1L-212ENST00000618312 PKHD1L1Q86WI1 4243 aa4.63□□□□□ -1.67
MTHFD1L-212ENST00000618312 C9orf92A6NGG3 77 aa4.62□□□□□ -1.67
MTHFD1L-212ENST00000618312 S4R3F8 94 aa4.6□□□□□ -1.67
MTHFD1L-212ENST00000618312 RYR1P21817 5038 aa4.59□□□□□ -1.67
MTHFD1L-212ENST00000618312 KRTAP10-6P60371 365 aaPredicted RBP4.59□□□□□ -1.67
MTHFD1L-212ENST00000618312 PCLOQ9Y6V0 5065 aa4.59□□□□□ -1.68
MTHFD1L-212ENST00000618312 KRTAP12-2P59991 146 aa4.59□□□□□ -1.68
MTHFD1L-212ENST00000618312 PKHD1P08F94 4074 aa4.57□□□□□ -1.68
MTHFD1L-212ENST00000618312 APOBP04114 4563 aaKnown RBP4.56□□□□□ -1.68
MTHFD1L-212ENST00000618312 PLAC4Q8WY50 150 aa4.54□□□□□ -1.68
MTHFD1L-212ENST00000618312 HSPG2P98160 4391 aa4.52□□□□□ -1.69
MTHFD1L-212ENST00000618312 FAT1Q14517 4588 aa4.51□□□□□ -1.69
MTHFD1L-212ENST00000618312 XP32Q5T750 250 aa4.49□□□□□ -1.69
MTHFD1L-212ENST00000618312 KRTAP10-4P60372 401 aaPredicted RBP4.47□□□□□ -1.69
MTHFD1L-212ENST00000618312 KRTAP12-1P59990 96 aa4.46□□□□□ -1.7
MTHFD1L-212ENST00000618312 LCE2DQ5TA82 110 aaPredicted RBP4.46□□□□□ -1.7
MTHFD1L-212ENST00000618312 Q5VSD8 79 aa4.44□□□□□ -1.7
MTHFD1L-212ENST00000618312 KRTAP10-8P60410 259 aa4.42□□□□□ -1.7
MTHFD1L-212ENST00000618312 KIAA1109Q2LD37 5005 aa4.41□□□□□ -1.7
MTHFD1L-212ENST00000618312 LRP1Q07954 4544 aaKnown RBP4.37□□□□□ -1.71
MTHFD1L-212ENST00000618312 ABCA13Q86UQ4 5058 aa4.37□□□□□ -1.71
MTHFD1L-212ENST00000618312 KRTAP4-5Q9BYR2 181 aa4.36□□□□□ -1.71
MTHFD1L-212ENST00000618312 MYCBP2O75592 4640 aa4.35□□□□□ -1.71
MTHFD1L-212ENST00000618312 FAT3Q8TDW7 4589 aa4.34□□□□□ -1.71
MTHFD1L-212ENST00000618312 RPS29P62273 56 aaKnown RBP4.34□□□□□ -1.71
MTHFD1L-212ENST00000618312 MT1HL1P0DM35 61 aa4.26□□□□□ -1.73
MTHFD1L-212ENST00000618312 KRTAP9-6A0A140TA67 174 aa4.24□□□□□ -1.73
MTHFD1L-212ENST00000618312 CAMK2N1Q7Z7J9 78 aa4.24□□□□□ -1.73
MTHFD1L-212ENST00000618312 LPAP08519 4548 aa4.23□□□□□ -1.73
MTHFD1L-212ENST00000618312 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
MTHFD1L-212ENST00000618312 LCE2CQ5TA81 110 aa4.22□□□□□ -1.73
MTHFD1L-212ENST00000618312 TNXBP22105 4242 aa4.22□□□□□ -1.73
MTHFD1L-212ENST00000618312 M0QZ58 72 aa4.21□□□□□ -1.74
MTHFD1L-212ENST00000618312 LCE2AQ5TA79 106 aaPredicted RBP4.18□□□□□ -1.74
MTHFD1L-212ENST00000618312 UBR4Q5T4S7 5183 aa4.17□□□□□ -1.74
MTHFD1L-212ENST00000618312 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
MTHFD1L-212ENST00000618312 R4GN34 69 aa4.14□□□□□ -1.75
MTHFD1L-212ENST00000618312 LRP2P98164 4655 aa4.14□□□□□ -1.75
MTHFD1L-212ENST00000618312 HMCN2Q8NDA2 5059 aa4.14□□□□□ -1.75
MTHFD1L-212ENST00000618312 LCE2BO14633 110 aa4.11□□□□□ -1.75
MTHFD1L-212ENST00000618312 MUC17Q685J3 4493 aa4.08□□□□□ -1.76
MTHFD1L-212ENST00000618312 KRTAP9-2Q9BYQ4 174 aa4.08□□□□□ -1.76
MTHFD1L-212ENST00000618312 HERC1Q15751 4861 aa4.07□□□□□ -1.76
MTHFD1L-212ENST00000618312 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
MTHFD1L-212ENST00000618312 LORP23490 312 aaPredicted RBP4.02□□□□□ -1.77
MTHFD1L-212ENST00000618312 SPRR5A0A1B0GTR4 108 aa3.94□□□□□ -1.78
MTHFD1L-212ENST00000618312 MUC2Q02817 5179 aa3.94□□□□□ -1.78
MTHFD1L-212ENST00000618312 INE1O15225 51 aa3.92□□□□□ -1.78
MTHFD1L-212ENST00000618312 KRTAP4-1Q9BYQ7 146 aa3.89□□□□□ -1.79
MTHFD1L-212ENST00000618312 TNP1P09430 55 aa3.86□□□□□ -1.79
MTHFD1L-212ENST00000618312 CRCT1Q9UGL9 99 aa3.81□□□□□ -1.8
MTHFD1L-212ENST00000618312 RNF213Q63HN8 5207 aa3.81□□□□□ -1.8
MTHFD1L-212ENST00000618312 KRTAP19-2Q3LHN2 52 aa3.71□□□□□ -1.82
MTHFD1L-212ENST00000618312 KRTAP9-7A8MTY7 169 aa3.7□□□□□ -1.82
MTHFD1L-212ENST00000618312 FAT4Q6V0I7 4981 aa3.68□□□□□ -1.82
MTHFD1L-212ENST00000618312 LCE3AQ5TA76 89 aa3.62□□□□□ -1.83
MTHFD1L-212ENST00000618312 MT1HP80294 61 aa3.61□□□□□ -1.83
MTHFD1L-212ENST00000618312 FLGP20930 4061 aaPredicted RBP3.59□□□□□ -1.83
MTHFD1L-212ENST00000618312 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.55□□□□□ -1.84
MTHFD1L-212ENST00000618312 M0R2T5 61 aa3.55□□□□□ -1.84
MTHFD1L-212ENST00000618312 KRTAP19-1Q8IUB9 90 aa3.47□□□□□ -1.85
MTHFD1L-212ENST00000618312 KRTAP10-10P60014 251 aa3.46□□□□□ -1.86
MTHFD1L-212ENST00000618312 KRTAP9-8Q9BYQ0 159 aa3.44□□□□□ -1.86
MTHFD1L-212ENST00000618312 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
MTHFD1L-212ENST00000618312 SPRR2GQ9BYE4 73 aa3.41□□□□□ -1.86
MTHFD1L-212ENST00000618312 MT1FP04733 61 aa3.4□□□□□ -1.86
MTHFD1L-212ENST00000618312 KRTAP12-3P60328 96 aa3.4□□□□□ -1.87
MTHFD1L-212ENST00000618312 KRTAP8-1Q8IUC2 63 aa3.4□□□□□ -1.87
MTHFD1L-212ENST00000618312 MT2AP02795 61 aa3.37□□□□□ -1.87
MTHFD1L-212ENST00000618312 SSPOA2VEC9 5147 aa3.37□□□□□ -1.87
MTHFD1L-212ENST00000618312 KRTAP9-3Q9BYQ3 159 aa3.35□□□□□ -1.87
MTHFD1L-212ENST00000618312 KRTAP10-5P60370 271 aa3.28□□□□□ -1.88
MTHFD1L-212ENST00000618312 KRTAP19-6Q3LI70 58 aa3.28□□□□□ -1.88
MTHFD1L-212ENST00000618312 USH2AO75445 5202 aa3.27□□□□□ -1.89
MTHFD1L-212ENST00000618312 MT1BP07438 61 aa3.27□□□□□ -1.89
MTHFD1L-212ENST00000618312 MT1XP80297 61 aa3.27□□□□□ -1.89
MTHFD1L-212ENST00000618312 KRTAP20-1Q3LI63 56 aa3.26□□□□□ -1.89
MTHFD1L-212ENST00000618312 KRTAP6-3Q3LI67 103 aa3.26□□□□□ -1.89
MTHFD1L-212ENST00000618312 KMT2DO14686 5537 aa3.26□□□□□ -1.89
MTHFD1L-212ENST00000618312 KRTAP10-7P60409 375 aaPredicted RBP3.26□□□□□ -1.89
MTHFD1L-212ENST00000618312 KRTAP19-8Q3LI54 63 aa3.23□□□□□ -1.89
MTHFD1L-212ENST00000618312 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
MTHFD1L-212ENST00000618312 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
MTHFD1L-212ENST00000618312 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.91
MTHFD1L-212ENST00000618312 KRTAP2-3P0C7H8 128 aa3.14□□□□□ -1.91
MTHFD1L-212ENST00000618312 KRTAP2-4Q9BYR9 128 aa3.14□□□□□ -1.91
MTHFD1L-212ENST00000618312 KRTAP2-1Q9BYU5 128 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms