RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 SERP1Q9Y6X1 66 aa11.03□□□□□ -0.64
CBWD3-213ENST00000618217 DMAC1Q96GE9 116 aa10.98□□□□□ -0.65
CBWD3-213ENST00000618217 RPS28P62857 69 aaKnown RBP10.93□□□□□ -0.66
CBWD3-213ENST00000618217 A8MUN3 132 aa10.92□□□□□ -0.66
CBWD3-213ENST00000618217 ACYP2P14621 99 aa10.92□□□□□ -0.66
CBWD3-213ENST00000618217 COA5Q86WW8 74 aa10.91□□□□□ -0.66
CBWD3-213ENST00000618217 S4R3F8 94 aa10.91□□□□□ -0.66
CBWD3-213ENST00000618217 KRTAP9-8Q9BYQ0 159 aa10.89□□□□□ -0.67
CBWD3-213ENST00000618217 LCA10Q71F78 164 aa10.88□□□□□ -0.67
CBWD3-213ENST00000618217 KRTAP3-3Q9BYR6 98 aa10.84□□□□□ -0.67
CBWD3-213ENST00000618217 CHKB-CPT1BH3BT56 60 aa10.78□□□□□ -0.68
CBWD3-213ENST00000618217 MT2AP02795 61 aa10.77□□□□□ -0.68
CBWD3-213ENST00000618217 CSAG1Q6PB30 78 aa10.76□□□□□ -0.69
CBWD3-213ENST00000618217 SMIM26A0A096LP01 95 aa10.73□□□□□ -0.69
CBWD3-213ENST00000618217 MT1FP04733 61 aa10.69□□□□□ -0.7
CBWD3-213ENST00000618217 KRTAP10-10P60014 251 aa10.62□□□□□ -0.71
CBWD3-213ENST00000618217 LCE2DQ5TA82 110 aaPredicted RBP10.62□□□□□ -0.71
CBWD3-213ENST00000618217 SPTSSBQ8NFR3 76 aa10.55□□□□□ -0.72
CBWD3-213ENST00000618217 KRTAP9-2Q9BYQ4 174 aa10.54□□□□□ -0.72
CBWD3-213ENST00000618217 Q1T7F1 81 aa10.51□□□□□ -0.73
CBWD3-213ENST00000618217 KRTAP9-3Q9BYQ3 159 aa10.51□□□□□ -0.73
CBWD3-213ENST00000618217 V9GYY9 64 aa10.49□□□□□ -0.73
CBWD3-213ENST00000618217 H0YAA0 97 aa10.47□□□□□ -0.73
CBWD3-213ENST00000618217 LINC01558Q9Y6Z2 57 aa10.44□□□□□ -0.74
CBWD3-213ENST00000618217 PRR15LQ9BU68 103 aa10.39□□□□□ -0.75
CBWD3-213ENST00000618217 PSPHP1O15172 72 aa10.37□□□□□ -0.75
CBWD3-213ENST00000618217 ADM2Q7Z4H4 148 aa10.34□□□□□ -0.75
CBWD3-213ENST00000618217 LCE2BO14633 110 aa10.33□□□□□ -0.76
CBWD3-213ENST00000618217 A0A1B0GU69 56 aa10.32□□□□□ -0.76
CBWD3-213ENST00000618217 KRTAP3-2Q9BYR7 98 aa10.29□□□□□ -0.76
CBWD3-213ENST00000618217 KRTAP19-1Q8IUB9 90 aa10.28□□□□□ -0.76
CBWD3-213ENST00000618217 SEC61GP60059 68 aa10.27□□□□□ -0.77
CBWD3-213ENST00000618217 Q5VV11 94 aa10.25□□□□□ -0.77
CBWD3-213ENST00000618217 P0C880 135 aa10.23□□□□□ -0.77
CBWD3-213ENST00000618217 SPRR2GQ9BYE4 73 aa10.23□□□□□ -0.77
CBWD3-213ENST00000618217 CRIPTQ9P021 101 aa10.23□□□□□ -0.77
CBWD3-213ENST00000618217 USH2AO75445 5202 aa10.18□□□□□ -0.78
CBWD3-213ENST00000618217 FSIP2Q5CZC0 6907 aa10.16□□□□□ -0.78
CBWD3-213ENST00000618217 KRTAP19-8Q3LI54 63 aa10.07□□□□□ -0.8
CBWD3-213ENST00000618217 A6NED7 52 aa10.06□□□□□ -0.8
CBWD3-213ENST00000618217 CRCT1Q9UGL9 99 aa10.06□□□□□ -0.8
CBWD3-213ENST00000618217 R4GN34 69 aa10.01□□□□□ -0.81
CBWD3-213ENST00000618217 A0A1B0GU33 70 aa10□□□□□ -0.81
CBWD3-213ENST00000618217 MT1BP07438 61 aa9.99□□□□□ -0.81
CBWD3-213ENST00000618217 UQCR11O14957 56 aa9.98□□□□□ -0.81
CBWD3-213ENST00000618217 KRTAP9-6A0A140TA67 174 aa9.96□□□□□ -0.81
CBWD3-213ENST00000618217 M0QZ58 72 aa9.96□□□□□ -0.81
CBWD3-213ENST00000618217 SSPOA2VEC9 5147 aa9.96□□□□□ -0.82
CBWD3-213ENST00000618217 BRK1Q8WUW1 75 aa9.93□□□□□ -0.82
CBWD3-213ENST00000618217 MIR22HGQ0VDD5 57 aa9.88□□□□□ -0.83
CBWD3-213ENST00000618217 KRTAP19-6Q3LI70 58 aa9.85□□□□□ -0.83
CBWD3-213ENST00000618217 SPATA8Q6RVD6 105 aa9.85□□□□□ -0.83
CBWD3-213ENST00000618217 CDC42SE1Q9NRR8 79 aa9.85□□□□□ -0.83
CBWD3-213ENST00000618217 KRTAP13-4Q3LI77 160 aa9.82□□□□□ -0.84
CBWD3-213ENST00000618217 A8MU10 97 aa9.82□□□□□ -0.84
CBWD3-213ENST00000618217 LINC01554Q52M75 96 aa9.78□□□□□ -0.84
CBWD3-213ENST00000618217 FCGBPQ9Y6R7 5405 aaPredicted RBP9.68□□□□□ -0.86
CBWD3-213ENST00000618217 A0A0D9SG42 100 aa9.66□□□□□ -0.86
CBWD3-213ENST00000618217 PLAC4Q8WY50 150 aa9.66□□□□□ -0.86
CBWD3-213ENST00000618217 PRO0628Q9UI54 55 aa9.64□□□□□ -0.87
CBWD3-213ENST00000618217 A6NN06 94 aa9.64□□□□□ -0.87
CBWD3-213ENST00000618217 KRTAP10-5P60370 271 aa9.61□□□□□ -0.87
CBWD3-213ENST00000618217 MT1XP80297 61 aa9.52□□□□□ -0.89
CBWD3-213ENST00000618217 K7ERS5 55 aa9.45□□□□□ -0.9
CBWD3-213ENST00000618217 SPINT4Q6UDR6 99 aa9.43□□□□□ -0.9
CBWD3-213ENST00000618217 KRTAP12-1P59990 96 aa9.42□□□□□ -0.9
CBWD3-213ENST00000618217 PRO2289Q9P1D8 64 aa9.42□□□□□ -0.9
CBWD3-213ENST00000618217 KRTAP12-2P59991 146 aa9.41□□□□□ -0.9
CBWD3-213ENST00000618217 PMAIP1Q13794 54 aa9.36□□□□□ -0.91
CBWD3-213ENST00000618217 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.34□□□□□ -0.91
CBWD3-213ENST00000618217 CAMK2N1Q7Z7J9 78 aa9.28□□□□□ -0.92
CBWD3-213ENST00000618217 MACF1Q9UPN3 7388 aaKnown RBP9.21□□□□□ -0.93
CBWD3-213ENST00000618217 KRTAP10-7P60409 375 aaPredicted RBP9.08□□□□□ -0.96
CBWD3-213ENST00000618217 KRTAP10-12P60413 245 aa9.04□□□□□ -0.96
CBWD3-213ENST00000618217 ROMO1P60602 79 aa9.04□□□□□ -0.96
CBWD3-213ENST00000618217 KRTAP9-7A8MTY7 169 aa9.03□□□□□ -0.96
CBWD3-213ENST00000618217 SYNE2Q8WXH0 6885 aaKnown RBP9.01□□□□□ -0.97
CBWD3-213ENST00000618217 KTN1-AS1Q86SY8 53 aa8.96□□□□□ -0.98
CBWD3-213ENST00000618217 C10orf95Q9H7T3 257 aa8.94□□□□□ -0.98
CBWD3-213ENST00000618217 KRTAP6-3Q3LI67 103 aa8.94□□□□□ -0.98
CBWD3-213ENST00000618217 KMT2DO14686 5537 aa8.91□□□□□ -0.98
CBWD3-213ENST00000618217 KRTAP4-8A0A0G2JLE6 195 aa8.91□□□□□ -0.98
CBWD3-213ENST00000618217 KRTAP4-8Q9BYQ9 185 aa8.91□□□□□ -0.98
CBWD3-213ENST00000618217 KRTAP5-9P26371 169 aa8.82□□□□□ -1
CBWD3-213ENST00000618217 KRTAP8-1Q8IUC2 63 aa8.8□□□□□ -1
CBWD3-213ENST00000618217 PRAC1Q96KF2 57 aa8.8□□□□□ -1
CBWD3-213ENST00000618217 TNP1P09430 55 aa8.73□□□□□ -1.01
CBWD3-213ENST00000618217 SVIPQ8NHG7 77 aa8.7□□□□□ -1.02
CBWD3-213ENST00000618217 KRTAP25-1Q3LHN0 102 aa8.68□□□□□ -1.02
CBWD3-213ENST00000618217 SPRR2FQ96RM1 72 aa8.65□□□□□ -1.03
CBWD3-213ENST00000618217 MUC12Q9UKN1 5478 aa8.54□□□□□ -1.04
CBWD3-213ENST00000618217 LCE3AQ5TA76 89 aa8.52□□□□□ -1.05
CBWD3-213ENST00000618217 KRTAP19-7Q3SYF9 63 aa8.51□□□□□ -1.05
CBWD3-213ENST00000618217 MDN1Q9NU22 5596 aa8.42□□□□□ -1.06
CBWD3-213ENST00000618217 KRTAP19-5Q3LI72 72 aa8.42□□□□□ -1.06
CBWD3-213ENST00000618217 NEBP20929 6669 aa8.4□□□□□ -1.06
CBWD3-213ENST00000618217 LCE1AQ5T7P2 110 aa8.4□□□□□ -1.07
CBWD3-213ENST00000618217 MT1EP04732 61 aa8.37□□□□□ -1.07
CBWD3-213ENST00000618217 SPRR2EP22531 72 aa8.36□□□□□ -1.07
CBWD3-213ENST00000618217 SPRR2BP35325 72 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms